https://www.beast2.org>) is a widely used Bayesian phylogenetic tool, that uses DNA/RNA/protein data and many model priors to create a posterior of jointly estimated phylogenies and parameters. 'BEAUti 2' (which is part of 'BEAST2') is a GUI tool that allows users to specify the many possible setups and generates the XML file 'BEAST2' needs to run. This package provides a way to create 'BEAST2' input files without active user input, but using R function calls instead.">

beautier: 'BEAUti' from R (original) (raw)

Author:

Richèl J.C. BilderbeekORCID iD [aut, cre], Joëlle Barido-Sottani [rev] (Joëlle reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209), David Winter [rev] (David reviewed the package for rOpenSci, see https://github.com/ropensci/onboarding/issues/209), Paul Van Els ORCID iD [ctb], Raphael Scherrer ORCID iD [ctb], Yacine B. Chehida ORCID iD [ctb], Katharine S. WalterORCID iD [ctb], Gary Napier ORCID iD [ctb], Jason Griffiths ORCID iD [ctb], Thijs Janzen ORCID iD [ctb], Pedro Taucce ORCID iD [ctb], Olivier Roy [ctb], Jana Riederer ORCID iD [ctb]