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blaster: Native R Implementation of an Efficient BLAST-Like Algorithm (original) (raw)

Implementation of an efficient BLAST-like sequence comparison algorithm, written in 'C++11' and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al (2018) <doi:10.1101/399782>.

Version: 1.0.7
Imports: Rcpp (≥ 1.0.5)
LinkingTo: Rcpp
Published: 2023-08-22
DOI: 10.32614/CRAN.package.blaster
Author: Manu Tamminen ORCID iD [aut, cre], Timothy Julian ORCID iD [aut], Aditya JeevennavarORCID iD [aut], Steven Schmid [aut]
Maintainer: Manu Tamminen
License: BSD_3_clause + file
URL: https://github.com/tamminenlab/blaster
NeedsCompilation: yes
SystemRequirements: C++
Materials: README
CRAN checks: blaster results

Documentation:

Reference manual: blaster.html , <blaster.pdf>

Downloads:

Package source: blaster_1.0.7.tar.gz
Windows binaries: r-devel: blaster_1.0.7.zip, r-release: blaster_1.0.7.zip, r-oldrel: blaster_1.0.7.zip
macOS binaries: r-release (arm64): blaster_1.0.7.tgz, r-oldrel (arm64): blaster_1.0.7.tgz, r-release (x86_64): blaster_1.0.7.tgz, r-oldrel (x86_64): blaster_1.0.7.tgz
Old sources: blaster archive

Reverse dependencies:

Reverse imports: ClustIRR

Linking:

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