deltaccd: Quantify Rhythmic Gene Co-Expression Relative to a Reference (original) (raw)
Infer progression of circadian rhythms in transcriptome data in which samples are not labeled with time of day and coverage of the circadian cycle may be incomplete. See Shilts et al. (2018) <doi:10.7717/peerj.4327>.
| Version: | 1.0.2 |
|---|---|
| Depends: | R (≥ 3.4) |
| Imports: | doRNG (≥ 1.6.6), foreach (≥ 1.4.3), ggplot2 (≥ 2.2.1), rlang (≥ 0.4.11), scales (≥ 0.5.0), statmod (≥ 1.4.30), data.table (≥ 1.14.0) |
| Suggests: | doParallel (≥ 1.0.11), knitr, rmarkdown, testthat (≥ 3.0.0), vdiffr |
| Published: | 2022-02-11 |
| DOI: | 10.32614/CRAN.package.deltaccd |
| Author: | Jake Hughey [aut, cre], Elliot Outland [aut] |
| Maintainer: | Jake Hughey |
| License: | GPL-2 |
| URL: | https://deltaccd.hugheylab.org,https://github.com/hugheylab/deltaccd |
| NeedsCompilation: | no |
| Materials: | NEWS |
| CRAN checks: | deltaccd results |
Documentation:
Downloads:
Linking:
Please use the canonical formhttps://CRAN.R-project.org/package=deltaccdto link to this page.