fitPoly: Genotype Calling for Bi-Allelic Marker Assays (original) (raw)
Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) <doi:10.1186/1471-2105-12-172>.
| Version: | 3.0.0 |
|---|---|
| Depends: | R (≥ 3.2.0) |
| Imports: | foreach |
| Suggests: | devEMF, doParallel, grDevices |
| Published: | 2018-03-16 |
| DOI: | 10.32614/CRAN.package.fitPoly |
| Author: | Roeland E. Voorrips and Gerrit Gort |
| Maintainer: | Roeland E. Voorrips <roeland.voorrips at wur.nl> |
| License: | GPL-2 |
| NeedsCompilation: | no |
| CRAN checks: | fitPoly results |
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