ggpmisc: Miscellaneous Extensions to 'ggplot2' (original) (raw)

Extensions to 'ggplot2' respecting the grammar of graphics paradigm. Statistics: locate and tag peaks and valleys; label plot with the equation of a fitted polynomial or other types of models including major axis, quantile and robust and resistant regression. Labels for P-value, R^2 or adjusted R^2 or information criteria for fitted models; parametric and non-parametric correlation; label with ANOVA table for fitted models; label with summary table for fitted models; annotations for multiple comparisons with adjusted P-values. Model fit classes for which suitable methods are provided by package 'broom' and 'broom.mixed' are supported as well as user-defined wrappers on model fit functions. Scales and stats to build volcano and quadrant plots based on outcomes, fold changes, p-values and false discovery rates.

Version: 0.6.2
Depends: R (≥ 4.0.0), ggpp (≥ 0.5.8)
Imports: grid, stats, ggplot2 (≥ 3.5.0), scales (≥ 1.3.0), rlang (≥ 1.1.3), generics (≥ 0.1.3), MASS (≥ 7.3-60.0.1), confintr (≥ 1.0.2), polynom (≥ 1.4-1), quantreg (≥ 5.97), lmodel2 (≥ 1.7-3), nlme (≥ 3.1-160), splus2R (≥ 1.3-5), multcomp (≥ 1.4-25), multcompView (≥ 0.1-10), tibble (≥ 3.2.1), plyr (≥ 1.8.9), dplyr (≥ 1.1.4), lubridate (≥ 1.9.3), caTools (≥ 1.18.3)
Suggests: knitr (≥ 1.45), rmarkdown (≥ 2.25), ggrepel (≥ 0.9.5), broom (≥ 1.0.3), broom.mixed (≥ 0.2.9.5), gginnards (≥ 0.1.0-1), ggtext (≥ 0.1.2), robustbase (≥ 0.99-4-1), testthat, vdiffr
Published: 2025-07-08
DOI: 10.32614/CRAN.package.ggpmisc
Author: Pedro J. Aphalo ORCID iD [aut, cre], Kamil Slowikowski ORCID iD [ctb], Samer Mouksassi ORCID iD [ctb]
Maintainer: Pedro J. Aphalo <pedro.aphalo at helsinki.fi>
BugReports: https://github.com/aphalo/ggpmisc/issues
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://docs.r4photobiology.info/ggpmisc/,https://github.com/aphalo/ggpmisc
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: ggpmisc results

Documentation:

Downloads:

Reverse dependencies:

Reverse imports: CEMiTool, CRMetrics, explainer, forestmangr, ggquickeda, hydroroute, methylclock, neutralitytestr, qPCRtools, RQdeltaCT, shinyTempSignal, simET, teal.modules.general, visa
Reverse suggests: chem16S, coveffectsplot, MetaNet, pcutils, rTwig

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