mpwR: Standardized Comparison of Workflows in Mass Spectrometry-Based Bottom-Up Proteomics (original) (raw)
Useful functions to analyze proteomic workflows including number of identifications, data completeness, missed cleavages, quantitative and retention time precision etc. Various software outputs are supported such as 'ProteomeDiscoverer', 'Spectronaut', 'DIA-NN' and 'MaxQuant'.
| Version: | 0.1.5 |
|---|---|
| Imports: | comprehenr, data.table, dplyr, flowTraceR, forcats, ggplot2, magrittr, plotly, purrr, stats, stringr, tibble, tidyr, UpSetR |
| Suggests: | flextable, knitr, rmarkdown, testthat (≥ 3.0.0), utils |
| Published: | 2023-11-13 |
| DOI: | 10.32614/CRAN.package.mpwR |
| Author: | Oliver Kardell [aut, cre] |
| Maintainer: | Oliver Kardell |
| License: | MIT + file |
| NeedsCompilation: | no |
| Materials: | README NEWS |
| CRAN checks: | mpwR results |
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