mvSLOUCH: Multivariate Stochastic Linear Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses (original) (raw)
Fits multivariate Ornstein-Uhlenbeck types of models to continues trait data from species related by a common evolutionary history. See K. Bartoszek, J, Pienaar, P. Mostad, S. Andersson, T. F. Hansen (2012) <doi:10.1016/j.jtbi.2012.08.005>. The suggested PCMBaseCpp package (which significantly speeds up the likelihood calculations) can be obtained from <https://github.com/venelin/PCMBaseCpp/>.
| Version: | 2.7.6 | ||
|---|---|---|---|
| Depends: | R (≥ 3.5.0), abind | ||
| Imports: | ape (≥ 5.3), graphics, methods, mvtnorm, Matrix, ouch, PCMBase (≥ 1.2.10), stats, matrixcalc | ||
| Suggests: | PCMBaseCpp (≥ 0.1.9), ggplot2, knitr, rmarkdown, mvMORPH, testthat | ||
| Published: | 2023-11-20 | ||
| DOI: | 10.32614/CRAN.package.mvSLOUCH | ||
| Author: | Krzysztof Bartoszek [cre, aut], John Clarke [ctb], Jesualdo Fuentes-Gonzalez [ctb], Jason Pienaar [ctb] | ||
| Maintainer: | Krzysztof Bartoszek | ||
| License: | GPL-2 | GPL-3 | file [expanded from: GPL (≥ 2) | file LICENCE] |
| NeedsCompilation: | no | ||
| Citation: | mvSLOUCH citation info | ||
| CRAN checks: | mvSLOUCH results |
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