rotl: Interface to the 'Open Tree of Life' API (original) (raw)
An interface to the 'Open Tree of Life' API to retrieve phylogenetic trees, information about studies used to assemble the synthetic tree, and utilities to match taxonomic names to 'Open Tree identifiers'. The 'Open Tree of Life' aims at assembling a comprehensive phylogenetic tree for all named species.
| Version: | 3.1.0 |
|---|---|
| Depends: | R (≥ 3.1.1) |
| Imports: | ape, curl (≥ 3.0.0), httr, jsonlite, rentrez, rlang, rncl (≥ 0.6.0) |
| Suggests: | knitr (≥ 1.12), MCMCglmm, phylobase, readxl, rmarkdown (≥ 0.7), RNeXML, testthat |
| Published: | 2023-06-15 |
| DOI: | 10.32614/CRAN.package.rotl |
| Author: | Francois Michonneau [aut, cre], Joseph Brown [aut], David Winter [aut], Scott Chamberlain [rev] |
| Maintainer: | Francois Michonneau <francois.michonneau at gmail.com> |
| BugReports: | https://github.com/ropensci/rotl/issues |
| License: | BSD_2_clause + file |
| URL: | https://docs.ropensci.org/rotl/, https://github.com/ropensci/rotl |
| NeedsCompilation: | no |
| Citation: | rotl citation info |
| Materials: | README NEWS |
| In views: | Phylogenetics |
| CRAN checks: | rotl results |
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