scperturbR: E-Statistics for Seurat Objects (original) (raw)
R version of 'scperturb' tool for single-cell perturbation analysis. Contains wrappers for performing E-statistics for Seurat objects. More details on the method can be found in Peidli et al. (2023) <doi:10.1101/2022.08.20.504663> and in Székely and Rizzo (2004).
| Version: | 0.1.0 |
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| Depends: | R (≥ 3.5.0) |
| Imports: | Seurat, dplyr, rdist, energy, stats |
| Suggests: | testthat (≥ 3.0.0) |
| Published: | 2023-03-01 |
| DOI: | 10.32614/CRAN.package.scperturbR |
| Author: | Stefan Peidli |
| Maintainer: | Stefan Peidli |
| BugReports: | https://github.com/sanderlab/scPerturb/issues |
| License: | MIT + file |
| URL: | https://github.com/sanderlab/scPerturb/tree/master/package_r |
| NeedsCompilation: | no |
| Language: | en-US |
| Materials: | NEWS |
| CRAN checks: | scperturbR results |
Documentation:
| Reference manual: | scperturbR.html , <scperturbR.pdf> |
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Downloads:
| Package source: | scperturbR_0.1.0.tar.gz |
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| Windows binaries: | r-devel: scperturbR_0.1.0.zip, r-release: scperturbR_0.1.0.zip, r-oldrel: scperturbR_0.1.0.zip |
| macOS binaries: | r-release (arm64): scperturbR_0.1.0.tgz, r-oldrel (arm64): scperturbR_0.1.0.tgz, r-release (x86_64): scperturbR_0.1.0.tgz, r-oldrel (x86_64): scperturbR_0.1.0.tgz |
Linking:
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