simode: Statistical Inference for Systems of Ordinary Differential Equations using Separable Integral-Matching (original) (raw)
Implements statistical inference for systems of ordinary differential equations, that uses the integral-matching criterion and takes advantage of the separability of parameters, in order to obtain initial parameter estimates for nonlinear least squares optimization. Dattner & Yaari (2018) <doi:10.48550/arXiv.1807.04202>. Dattner et al. (2017) <doi:10.1098/rsif.2016.0525>. Dattner & Klaassen (2015) <doi:10.1214/15-EJS1053>.
Version: | 1.2.2 |
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Depends: | R (≥ 3.4.0) |
Imports: | deSolve, pracma, quadprog, glmnet, ncvreg |
Suggests: | parallel, knitr, testthat (≥ 3.0.0), rmarkdown |
Published: | 2024-02-16 |
DOI: | 10.32614/CRAN.package.simode |
Author: | Itai Dattner [aut], Rami Yaari [aut, cre] |
Maintainer: | Rami Yaari |
License: | GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] |
NeedsCompilation: | no |
CRAN checks: | simode results |
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