treespace: Statistical Exploration of Landscapes of Phylogenetic Trees (original) (raw)
Tools for the exploration of distributions of phylogenetic trees. This package includes a 'shiny' interface which can be started from R using treespaceServer(). For further details see Jombart et al. (2017) <doi:10.1111/1755-0998.12676>.
Version:
1.1.4.3
Depends:
Imports:
adegenet, adegraphics, combinat, compiler, distory, fields, htmlwidgets, MASS, methods, parallel, phangorn, phytools, Rcpp, rgl, RLumShiny, scatterD3, shiny, shinyBS, utils
LinkingTo:
Suggests:
ggplot2, igraph, knitr, pander, RColorBrewer, reshape2, rmarkdown, sf, testthat
Published:
2023-09-07
DOI:
10.32614/CRAN.package.treespace
Author:
Thibaut Jombart 
[aut], Michelle Kendall [aut, cre], Jacob Almagro-Garcia [aut], Caroline Colijn [aut]
Maintainer:
Michelle Kendall <michelle.kendall at warwick.ac.uk>
BugReports:
https://github.com/thibautjombart/treespace/issues
License:
MIT + file
URL:
https://cran.r-project.org/package=treespace,https://github.com/thibautjombart/treespace
NeedsCompilation:
yes
Citation:
Materials:
In views:
CRAN checks: