Bioconductor Code: scider (original) (raw)

# scider: Spatial cell-type inter-correlation by density in R. [\](https://github.com/ChenLaboratory/scider/actions) [\](https://app.codecov.io/gh/ChenLaboratory/scider?branch=devel) *scider* implements functions to analyse spatial transcriptomics data with cell type annotations by performing cell type correlation via density estimation and cell type co-localization via real number distance. Functions include density estimation, statistical modelling and visualizations. Install released version form Bioconductor ``` if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("scider") ``` Install development version from GitHub ``` library(devtools) devtools::install_github("ChenLaboratory/scider") ```