Gaurav Vaidya | University of Colorado, Boulder (original) (raw)

Gaurav Vaidya

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Papers by Gaurav Vaidya

Research paper thumbnail of From documents to datasets: A MediaWiki-based method of annotating and extracting species observations in century-old field notebooks

Abstract Part diary, part scientific record, biological field notebooks often contain details nec... more Abstract Part diary, part scientific record, biological field notebooks often contain details necessary to understanding the location and environmental conditions existent during collecting events. Despite their clear value for (and recent use in) global change studies, the text-mining outputs from field notebooks have been idiosyncratic to specific research projects, and impossible to discover or re-use. Best practices and workflows for digitization, transcription, extraction, and integration with other sources are nascent or non-existent.

Research paper thumbnail of Biodiversity in Tropical Invertebrates

ABSTRACT How usable are taxonomic review databases in searching for patterns in nature? In this p... more ABSTRACT How usable are taxonomic review databases in searching for patterns in nature? In this project, we have attempted to look at this question by examining the synonymy production in the freshwater crab taxonomy, as well as by studying species richness in the fruitfly genus Ceratitus. By the former, we hope to better understand the patterns in synonymy production, and by the latter, the accuracy of species richness estimators.

Research paper thumbnail of DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success

Systematic …, Jan 1, 2006

Research paper thumbnail of Biodiversity research based on taxonomic revisions—A tale of unrealized opportunities

Diptera Diversity: Status, …, Jan 1, 2009

Research paper thumbnail of SequenceMatrix: concatenation software for the fast assembly of multi‐gene datasets with character set and codon information

Research paper thumbnail of Fly Flirts

Research paper thumbnail of From documents to datasets: A MediaWiki-based method of annotating and extracting species observations in century-old field notebooks

Abstract Part diary, part scientific record, biological field notebooks often contain details nec... more Abstract Part diary, part scientific record, biological field notebooks often contain details necessary to understanding the location and environmental conditions existent during collecting events. Despite their clear value for (and recent use in) global change studies, the text-mining outputs from field notebooks have been idiosyncratic to specific research projects, and impossible to discover or re-use. Best practices and workflows for digitization, transcription, extraction, and integration with other sources are nascent or non-existent.

Research paper thumbnail of Biodiversity in Tropical Invertebrates

ABSTRACT How usable are taxonomic review databases in searching for patterns in nature? In this p... more ABSTRACT How usable are taxonomic review databases in searching for patterns in nature? In this project, we have attempted to look at this question by examining the synonymy production in the freshwater crab taxonomy, as well as by studying species richness in the fruitfly genus Ceratitus. By the former, we hope to better understand the patterns in synonymy production, and by the latter, the accuracy of species richness estimators.

Research paper thumbnail of DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success

Systematic …, Jan 1, 2006

Research paper thumbnail of Biodiversity research based on taxonomic revisions—A tale of unrealized opportunities

Diptera Diversity: Status, …, Jan 1, 2009

Research paper thumbnail of SequenceMatrix: concatenation software for the fast assembly of multi‐gene datasets with character set and codon information

Research paper thumbnail of Fly Flirts

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