Computer Physics Communications, Volume 197 (original) (raw)

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Volume 197, December 2015

Computational physics

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    Hugh F. Wilson:
    Efficient ab initio free energy calculations by classically assisted trajectory sampling. 1-6
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    Andrzej Biborski, Andrzej Piotr Kadzielawa, Józef Spalek:
    Combined shared and distributed memory ab-initio computations of molecular-hydrogen systems in the correlated state: Process pool solution and two-level parallelism. 7-16
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    Vladimir V. Arsoski, N. A. Cukaric, M. Z. Tadic, François M. Peeters:
    An efficient finite-difference scheme for computation of electron states in free-standing and core-shell quantum wires. 17-26
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    Safa Jamali, Arman Boromand, Shaghayegh Khani, Joao M. Maia:
    Gaussian-inspired auxiliary non-equilibrium thermostat (GIANT) for Dissipative Particle Dynamics simulations. 27-34
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    Yali Gao, Liquan Mei, Rui Li:
    A time-splitting Galerkin finite element method for the Davey-Stewartson equations. 35-42
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    Ali Shokri, Fatemeh Afshari:
    High-order compact ADI method using predictor-corrector scheme for 2D complex Ginzburg-Landau equation. 43-50
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    Ziguang Chen, Florin Bobaru:
    Selecting the kernel in a peridynamic formulation: A study for transient heat diffusion. 51-60
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    Motoki Nakata, Masanori Nunami, Tomohiko Watanabe, Hideo Sugama:
    Improved collision operator for plasma kinetic simulations with multi-species ions and electrons. 61-72
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    Guangye Chen, Luis Chacón:
    A multi-dimensional, energy- and charge-conserving, nonlinearly implicit, electromagnetic Vlasov-Darwin particle-in-cell algorithm. 73-87
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    Alejandro López, William Nicholls, Matthew T. Stickland, William M. Dempster:
    CFD study of Jet Impingement Test erosion using Ansys Fluent® and OpenFOAM®. 88-95
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    Jingwen Wu, Hongjiong Tian:
    Functionally-fitted block methods for second order ordinary differential equations. 96-108
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    Keith Gilmore, John Vinson, Eric L. Shirley, David Prendergast, C. Das Pemmaraju, Joshua J. Kas, Fernando D. Vila, John J. Rehr:
    Efficient implementation of core-excitation Bethe-Salpeter equation calculations. 109-117
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    Ernesto Estevez-Rams, C. Pérez-Demydenko, B. Aragón Fernández, Raimundo Lora Serrano:
    Visualizing long vectors of measurements by use of the Hilbert curve. 118-127
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    Ryo Urano, Yuko Okamoto:
    Deterministic replica-exchange method without pseudo random numbers for simulations of complex systems. 128-135
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    Andrew T. Barker, Martin Stoll:
    Domain decomposition in time for PDE-constrained optimization. 136-143
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    Peicheng Yu, Xinlu Xu, Adam Tableman, Viktor K. Decyk, Frank S. Tsung, Frederico Fiuza, Asher Davidson, Jorge Vieira, Ricardo A. Fonseca, Wei Lu, Luís O. Silva, Warren B. Mori:
    Mitigation of numerical Cerenkov radiation and instability using a hybrid finite difference-FFT Maxwell solver and a local charge conserving current deposit. 144-152
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    Changfeng Xue, Qiongwei Huang, Shaozhong Deng:
    Coulomb Green's function and image potential near a cylindrical diffuse interface. 153-168
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    Sverker Edvardsson, Magnus Neuman, Per Edström, Håkan Olin:
    Solving equations through particle dynamics. 169-181
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    Mohankumar Nandagopal, Soubhadra Sen:
    Some remarks regarding a modified Gauss-Legendre scheme. 182-184

Computer programs in physics

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    Marius Wallraff, Christopher Wiebusch:
    Calculation of oscillation probabilities of atmospheric neutrinos using nuCraft. 185-189
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    Constantinos Voglis, Panagiotis E. Hadjidoukas, Konstantinos E. Parsopoulos, Dimitris G. Papageorgiou, Isaac E. Lagaris, Michael N. Vrahatis:
    p-MEMPSODE: Parallel and irregular memetic global optimization. 190-211
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    Pierre Hirel:
    Atomsk: A tool for manipulating and converting atomic data files. 212-219
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    Christos Dimitroulis, Theophanes Raptis, Vasilios Raptis:
    POLYANA - A tool for the calculation of molecular radial distribution functions based on Molecular Dynamics trajectories. 220-226
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    Marco Lauricella, Giuseppe Pontrelli, Ivan Coluzza, Dario Pisignano, Sauro Succi:
    JETSPIN: A specific-purpose open-source software for simulations of nanofiber electrospinning. 227-238
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    Céline Degrande:
    Automatic evaluation of UV and R2 terms for beyond the Standard Model Lagrangians: A proof-of-principle. 239-262
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    D. Barducci, Alexander Belyaev, M. Buchkremer, J. Marrouche, Stefano Moretti, Luca Panizzi:
    XQCAT: eXtra Quark Combined Analysis Tool. 263-275
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    Hiren H. Patel:
    Package-X: A Mathematica package for the analytic calculation of one-loop integrals. 276-290
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    István Hornyák, Andras T. Kruppa:
    An algorithm for the calculation of the partial wave expansion of the Coulomb-distorted plane wave. 291-297
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    Yukihiro Komura:
    OpenACC programs of the Swendsen-Wang multi-cluster spin flip algorithm. 298-303
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    Sunhwan Jo, Wei Jiang:
    A generic implementation of replica exchange with solute tempering (REST2) algorithm in NAMD for complex biophysical simulations. 304-311
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    Johan Alwall, Claude Duhr, Benjamin Fuks, Olivier Mattelaer, Deniz Gizem Öztürk, Chia-Hsien Shen:
    Computing decay rates for new physics theories with FeynRules and MadGraph 5_aMC@NLO. 312-323
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    Predrag Lazic:
    CellMatch: Combining two unit cells into a common supercell with minimal strain. 324-334

New version announcements

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    Chao-Hsi Chang, Xian-You Wang, Xing-Gang Wu:
    BCVEGPY2.2: A newly upgraded version for hadronic production of the meson Bc and its excited states. 335-338
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    Peter Wittek, Luca Calderaro:
    Extended computational kernels in a massively parallel implementation of the Trotter-Suzuki approximation. 339-340
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    Zhong-Li Liu:
    Phasego 2.0: Counting full anharmonic effects from high-temperature phonon density of states. 341-342

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