Three types of nuclear genes encoding chloroplast RNA-binding proteins (cp29, cp31 and cp33) are present in Arabidopsis thaliana: presence of cp31 in chloroplasts and its homologue in nuclei/cytoplasms (original) (raw)
Adam SA, Nakagawa T, Swanson MS, Woodruff TK, Dreyfuss G: mRNA polyadenylate-binding protein: gene isolation and sequencing and identification of a ribonucleoprotein consensus sequence. Mol Cell Biol 6: 2932–2943 (1986). PubMed Google Scholar
Barkan A, Miles D, Taylor WC: Chloroplast gene expression in nuclear, photosynthetic mutants of maize. EMBO J 5: 1421–1427 (1986). PubMed Google Scholar
Bar-Zvi D, Shagan T, Schindler U, Cashmore AR: RNP-T, a ribonucleoprotein from Arabidopsis thaliana, contains two RNP-80 motifs and a novel acidic repeat arranged in an α-helix conformation. Plant Mol Biol 20: 833–838 (1992). PubMed Google Scholar
Brown JWS: A catalogue of splice junction and putative branch point sequences from plant introns. Nucl Acids Res 14: 9549–9559 (1986). PubMed Google Scholar
Burd CG, Swanson MS, Görlach M, Dreyfuss G: Primary structures of the heterogeneous nuclear ribonucleoprotein A2, B1, and C2 proteins: a diversity of RNA-binding proteins is generated by small peptide inserts. Proc Natl Acad Sci USA 86: 9788–9792 (1989). PubMed Google Scholar
Castresana C, Staneloni R, Malik VS, Cashmore AR: Molecular characterization of two clusters of genes encoding the type I CAB polypeptides of PSII in Nicotiana plumbaginifolia. Plant Mol Biol 10: 117–126 (1987). Google Scholar
Chang C, Meyerowitz EM: Molecular cloning and DNA sequence of the Arabidopsis thaliana alcohol dehydrogenase gene. Proc Natl Acad Sci USA 83: 1408–1412 (1986). PubMed Google Scholar
Cook WB, Walker JC: Identification of a maize nucleic acid-binding protein (NBP) belonging to a family of nuclear-encoded chloroplast proteins. Nucl Acids Res 20: 359–364 (1992). PubMed Google Scholar
Deng XW, Gruissem W: Control of plastid gene expression during development: the limited role of transcriptional regulation. Cell 49: 379–387 (1987). ArticlePubMed Google Scholar
de Vries S, Hoge H, Bisseling T: Isolation of total and polysomal RNA from plant tissues. In: Gelvin SB, Schilperoort (eds) Plant Molecular Biology Manual B6: pp. 1–13. Kluwer Academic Publishers, Dordrecht (1988). Google Scholar
Didier DK, Klee HJ: Identification of an Arabidopsis DNA-binding protein with homology to nucleolin. Plant Mol Biol 18: 977–979 (1992). PubMed Google Scholar
Dreyfuss G, Matunis MJ, Piñol-Roma S, Burd CG: hnRNP proteins and the biogenesis of mRNA. Annu Rev Biochem 62: 289–321 (1993). ArticlePubMed Google Scholar
Feinberg AP, Vogelstein B: A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132: 6–13 (1983). PubMed Google Scholar
Fu XD, Maniatis T. Isolation of a complementary DNA that encodes the mammalian splicing factor SC35. Science 256: 535–538 (1992). PubMed Google Scholar
Gamble PE, Mullet JE: Blue light regulates the accumulation of two psbD-psbC transcripts in barley chloroplasts. EMBO J 8: 2785–2794 (1989). PubMed Google Scholar
Ge H, Zuo P, Manley JL: Primary structure of the human splicing factor ASF reveals similarities with Drosophila regulators. Cell 66: 373–382 (1991). ArticlePubMed Google Scholar
Hiratsuka J, Shimada H, Whittier R, Ishibashi T, Sakamoto M, Mori M, Kondo C, Honji Y, Sun CR, Meng BY, Li Y, Kanno A, Nishizawa Y, Hirai A, Shinozaki K, Sugiura M: The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular re-combination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals. Mol Gen Genet 217: 185–194 (1989). PubMed Google Scholar
Keegstra K, Olsen LJ, Theg SM: Chloroplastic precursors and their transport across the envelope membranes. Annu Rev Plant Physiol Plant Mol Biol 40: 471–501 (1989). Article Google Scholar
Kenan DJ, Query CC, Keene JD: RNA recognition: towards identifying determinants of specificity. Trends Biochem Sci 16: 214–220 (1991). ArticlePubMed Google Scholar
Klee HJ, Muskopf YM, Gasser CS: Cloning of an Arabidopsis thaliana gene encoding 5-enolpyruvylshikimate-3-phosphate synthase: sequence analysis and manipulation to obtain glyphosate-tolerant plants. Mol Gen Genet 210: 437–442 (1987). PubMed Google Scholar
Krainer AR, Mayeda A, Kozak D, Binns G: Functional expression of cloned human splicing factor SF2: homology to RNA-binding proteins, U1 70K, Drosophila splicing regulators. Cell 66: 383–394 (1991). ArticlePubMed Google Scholar
Kuchka MR, Goldschmidt-Clermont M, van Dillewijn J, Rochaix JD: Mutation at the Chlamydomonas nuclear NAC2 locus specifically affects stability of the chloroplast psbD transcript encoding polypeptide D2 of PS II. Cell 58: 869–876 (1989). ArticlePubMed Google Scholar
Li Y, Sugiura M: Three distinct ribonucleoproteins from tobacco chloroplasts: each contains a unique amino terminal acidic domain and two ribonucleoprotein consensus motifs. EMBO J 9: 3059–3066 (1990). PubMed Google Scholar
Li Y, Sugiura M: Nucleic acid-binding specificities of tobacco chloroplast ribonucleoproteins. Nucl Acids Res 19: 2893–2896 (1991). PubMed Google Scholar
Li Y, Ye L, Sugita M, Sugiura M: Tobacco nuclear gene for the 31 kd chloroplast ribonucleoprotein: genomic organization, sequence analysis and expression. Nucl Acids Res 19: 2987–2991 (1991). PubMed Google Scholar
Li Y, Nagayoshi S, Sugita M, Sugiura M: Structure and expression of the tobacco nuclear gene encoding the 33 kDa chloroplast ribonucleoprotein. Mol Gen Genet 239: 304–309 (1993). Google Scholar
Margilus: Symbiosis in Cell Evolution: Life and its Environment in the Early Earth. Freeman, San Francisco (1981). Google Scholar
Mieszczak M, Klahre U, Levy JH, Goodall GJ, Filipowicz W: Multiple plant RNA-binding proteins identified by PCR: expression of cDNAs encoding RNA-binding proteins targeted to chloroplasts in Nicotiana plumbaginifolia. Mol Gen Genet 234: 390–400 (1992). Google Scholar
Mullet JE, Klein RR: Transcription and RNA stability are important determinants of higher plant chloroplast RNA levels. EMBO J 6: 1571–1579 (1987). Google Scholar
Murray MG, Thompson WF: Rapid isolation of high molecular weight plant DNA. Nucl Acids Res 8: 4321–4325 (1980). PubMed Google Scholar
Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York (1989). Google Scholar
Schuster G, Gruissem W: Chloroplast mRNA 3′ end processing requires a nuclear-encoded RNA-binding protein. EMBO J 10: 1493–1502 (1991). PubMed Google Scholar
Sieburth LE, Berry-Lowe S, Schmidt GW: Chloroplast RNA stability in Chlamydomonas: rapid degradation of psbB and psbC transcripts in two nuclear mutants. Plant Cell 3: 175–189 (1991). ArticlePubMed Google Scholar
Sugiura M: Transcript processing in plastid: trimming, cutting, splicing. In: Bogorad L, Vasil IK (eds) The Molecular Biology of Plastids, pp. 125–137. Academic Press, San Diego (1991). Google Scholar
Von Heijne G, Steppuhn J, Herrmann RG: Domain structure of mitochondrial and chloroplast targeting peptides. Eur J Biochem 180: 535–545 (1989). PubMed Google Scholar
Ye L, Li Y, Fukami-Kobayashi K, Go M, Konishi T, Watanabe A, Sugiura M: Diversity of a ribonucleoprotein family in tobacco chloroplasts: two new chloroplast ribonucleoproteins and a phylogenetic tree of ten chloroplast RNA-binding domains. Nucl Acids Res 19: 6485–6490 (1991). PubMed Google Scholar
Zamore PD, Patton JG, Green MR: Cloning and domain structure of the mammalian splicing factor U2AF. Nature 355: 609–614 (1992). ArticlePubMed Google Scholar