Antibodies to defined histone epitopes reveal variations in chromatin conformation and underacetylation of centric heterochromatin in human metaphase chromosomes (original) (raw)
Abstract
Unfixed metaphase chromosome preparations from human lymphocyte cultures were immunofluorescently labelled using antibodies to defined histone epitopes. Both mouse monoclonal antibody HBC-7, raised against the N-terminal region of H2B, and rabbit serum R5/12, which recognizes H4 acetylated at Lys-12, gave non-uniform labelling patterns, whereas control antibodies against total histone fractions H4 and H1 produced homogeneous fluorescence. HBC-7 bound approximately uniformly to the bulk of the chromosomes, but the major heterochromatic domains of chromosomes 1, 9, 15, 16 and the Y showed significantly brighter fluorescence. Serum R5/12 indicated an overall reduction in acetylation of H4 in metaphase chromosomes compared with interphase nuclei, although some specific chromosomal locations had considerably elevated acetylation levels. Acetylation levels in the major heterochromatic domains appeared extremely low. To investigate further the differences noted in heterochromatin labelling, metaphases from cultures grown in the presence of various agents known to induce undercondensation of the major heterochromatic domains were similarly immunolabelled. Decondensed heterochromatin no longer exhibited higher than normal immunofluorescence levels with HBC-7. The higher resolution afforded by “stretching” the centromeric heterochromatin of chromosomes 1, 9 and 16 confirmed the low level of H4 acetylation in these domains. We consider the implications of these observations in relation to chromatin conformation and activity.
Access this article
Subscribe and save
- Get 10 units per month
- Download Article/Chapter or eBook
- 1 Unit = 1 Article or 1 Chapter
- Cancel anytime Subscribe now
Buy Now
Price excludes VAT (USA)
Tax calculation will be finalised during checkout.
Instant access to the full article PDF.
Similar content being viewed by others
References
- Bird AP (1986) CpG-rich islands and the function of DNA methylation. Nature 321: 209–213
Google Scholar - Csordas A (1990) On the biological role of histone acetylation. Biochem J 265: 23–38
Google Scholar - D'Anna JA, Gurely LR, Tobey RA (1983) Extent of histone modifications and H1° content during cell cycle progression in the presence of butyrate. Exp Cell Res 147: 407–417
Google Scholar - Donlon TA, Magenis RE (1983) Methyl green is a substitute for distamycin A in the formation of distamycin A/DAPI C-bands. Hum Genet 65: 144–146
Google Scholar - Felsenfeld G (1978) Chromatin. Nature 271: 115–122
Google Scholar - Gatti M, Smith DA, Baker BS (1983) A gene controlling condensation of heterochromatin in Drosophila melanogaster. Science 221: 83–85
Google Scholar - Gooderham K, Jeppesen P (1983) Chinese hamster metaphase chromosomes isolated under physiological conditions: a partial characterization of associated non-histone proteins and protein cores. Exp Cell Res 144: 1–14
Google Scholar - Gosden JR, Mitchell AR, Buckland RA, Clayton RP, Evans HJ (1975) The location of four human satellite DNAs on human chromosomes. Exp Cell Res 92: 148–158
Google Scholar - Haaf T, Dominguez-Steglich M, Schmid M (1990) Immunocytogenetics: IV. Human autoantibodies to heterochromatin-associated proteins. Cytogenet Cell Genet 53: 40–51
Google Scholar - Hilwig I, Gropp A (1973) Decondensation of constitutive heterochromatin in L cell chromosomes by a benzimidazole compound (“33258 Hoechst”). Exp Cell Res 81: 474–477
Google Scholar - James TC, Elgin SCR (1986) Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene. Mol Cell Biol 6: 3862–3872
Google Scholar - Jeppesen P, Nicol L (1986) Non-kinetochore directed autoantibodies in scleroderma/CREST: identification of an activity recognizing a metaphase chromosome core non-histone protein. Mol Biol Med 3: 369–384
Google Scholar - Jeppesen PGN, Bankier AT, Sanders L (1978) Non-histone proteins and the structure of metaphase chromosomes. Exp Cell Res 115: 293–302
Google Scholar - Jones PA, Taylor SM (1980) Cellular differentiation, cytidine analogs and DNA methylation. Cell 20: 85–93
Google Scholar - Matthews HR (1988) Histone modifications and chromatin structure. In: Adolph K (ed) Chromosomes and chromatin. 1. CRC Press, Boca Raton, Florida, pp 3–32
Google Scholar - Miller OJ, Schnedl W, Allen J, Erlanger BF (1974) 5-Methylcytosine localized in mammalian constitutive heterochromatin. Nature 251: 636–637
Google Scholar - Moroi Y, Peebles C, Fritzler MJ, Steigerwald J, Tan EM (1980) Autoantibody to centromere (kinetochore) in scleroderma sera. Proc Natl Acad Sci USA 77: 1627–1631
Google Scholar - Musich PR, Brown FL, Maio JJ (1977) Subunit structure of chromatin and the organization of eukaryotic highly repetitive DNA: nucleosomal proteins associated with a highly repetitive mammalian DNA. Proc Natl Acad Sci USA 74: 3297–3301
Google Scholar - Omori A, Igo-Kemenes T, Zachau HG (1980) Different repeat lengths in rat satellite I DNA containing chromatin and bulk chromatin. Nucleic Acids Res 8: 5363–5375
Google Scholar - Perry PE, Thomson EJ (1986) Immunogold labelling of metaphase cells. Cytogenet Cell Genet 41: 121–125
Google Scholar - Prosser J, Frommer M, Paul C, Vincent PC (1986) Sequence relationships of three human satellite DNAs. J Mol Biol 187: 145–155
Google Scholar - Reuter G, Giarre M, Farah J, Gausz J, Spierer A, Spierer P (1990) Dependence of position-effect variegation in Drosophila on dose of a gene encoding an unusual zinc-finger protein. Nature 344: 219–223
Google Scholar - Richmond TJ, Finch JT, Rushton B, Rhodes D, Klug A (1984) Structure of the nucleosome core particle at 7 Ao resolution. Nature 311: 532–537
Google Scholar - Rocchi A, DiCastro M, Prantera G (1979) Effects of DAPI on human leukocytes in vitro. Cytogenet Cell Genet 23: 250–254
Google Scholar - Schmid M, Grunert D, Haaf T, Engel W (1983) A direct demonstration of somatically paired heterochromatin of human chromosomes. Cytogenet Cell Genet 36: 554–561
Google Scholar - Simpson RT (1978) Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones. Biochemistry 17: 5524–5531
Google Scholar - Stollar BD, Ward M (1970) Rabbit antibodies to histone fractions as specific reagents for preparative and comparative studies. J Biol Chem 245: 1261–1266
Google Scholar - Strauss F, Varshavsky A (1984) A protein binds to a satellite DNA repeat at three specific sites that would be brought into mutual proximity by DNA folding in the nucleosome. Cell 37: 889–901
Google Scholar - Thoma F, Koller T, Klug A (1979) Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin. J Cell Biol 83: 403–427
Google Scholar - Turner BM (1982) Immunofluorescent staining of human metaphase chromosomes with monoclonal antibody to histone H2B. Chromosoma 87: 345–357
Google Scholar - Turner BM (1989) Acetylation and deacetylation of histone H4 continue through metaphase with depletion of more-acetylated isoforms and altered site usage. Exp Cell Res 182: 206–214
Google Scholar - Turner BM, Fellows G (1989) Specific antibodies reveal ordered and cell-cycle-related use of histone-H4 acetylation sites in mammalian cells. Eur J Biochem 179: 131–139
Google Scholar - Turner BM, O'Neill LP, Allan IM (1989) Histone H4 acetylation in human cells. Frequency of acetylation at different sites defined by immunolabelling with site-specific antibodies. FEBS Lett 253: 141–145
Google Scholar - Weintraub H, vanLente F (1974) Dissection of chromosome structure with trypsin and nucleases. Proc Natl Acad Sci USA 71: 4249–4253
Google Scholar - Whitfield GF, Fellows G, Turner BM (1986) Characterization of monoclonal antibodies to histone 2B. Localization of epitopes and analysis of binding to chromatin. Eur J Biochem 157: 513–521
Google Scholar - Wu RS, Panusz HT, Hatch CL, Bonner WM (1986) Histones and their modifications. CRC Crit Rev Biochem 20: 201–263
Google Scholar - Zhang XY, Horz W (1982) Analysis of highly purified satellite DNA containing chromatin from the mouse. Nucleic Acids Res 10: 1481–1494
Google Scholar
Author information
Authors and Affiliations
- MRC Human Genetics Unit, Western General Hospital, Crewe Road, EH4 2XU, Edinburgh, UK
Peter Jeppesen & Arthur Mitchell - School of Basic Medical Sciences, Department of Anatomy, University of Birmingham Medical School, B15 2TJ, Birmingham, UK
Bryan Turner & Paul Perry
Authors
- Peter Jeppesen
You can also search for this author inPubMed Google Scholar - Arthur Mitchell
You can also search for this author inPubMed Google Scholar - Bryan Turner
You can also search for this author inPubMed Google Scholar - Paul Perry
You can also search for this author inPubMed Google Scholar
Additional information
by W.C. Earnshaw
Rights and permissions
About this article
Cite this article
Jeppesen, P., Mitchell, A., Turner, B. et al. Antibodies to defined histone epitopes reveal variations in chromatin conformation and underacetylation of centric heterochromatin in human metaphase chromosomes.Chromosoma 101, 322–332 (1992). https://doi.org/10.1007/BF00346011
- Received: 27 December 1990
- Revised: 06 May 1991
- Accepted: 19 June 1991
- Issue Date: March 1992
- DOI: https://doi.org/10.1007/BF00346011