A heteronuclear correlation experiment for simultaneous determination of 15N longitudinal decay and chemical exchange rates of systems in slow equilibrium (original) (raw)
Summary
A heteronuclear correlation experiment is described which permits simultaneous characterization of both 15N longitudinal decay rates and slow conformational exchange rates. Data pertaining to the exchange between folded and unfolded forms of an SH3 domain is used to illustrate the technique. Because the unfolded form of the molecule, on average, shows significantly higher NH exchange rates than the folded form, and approach which minimizes the degree of water saturation is employed, enabling the extraction of accurate rate constants.
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References
- BaxA. and DavisD. (1985) J. Magn. Reson., 63, 207–213.
Google Scholar - BaxA. and PochapskyS. (1992) J. Magn. Reson., 99, 638–643.
Google Scholar - Bothner-ByA.A., StephensR.L., LeeJ., WarrenC.D. and JeanlozR.W. (1984) J. Am. Chem. Soc., 106, 811–813.
Google Scholar - BoydJ., HommelU. and CampbellI.D. (1990) Chem. Phys. Lett., 175, 477–482.
Article Google Scholar - CavanaghJ., PalmerA.G., WrightP.E. and RanceM. (1991) J. Magn. Reson., 91, 429–435.
Google Scholar - ErnstR.R., BodenhausenG. and WokaunA. (1987) Principles of Nuclear Magnetic Resonance in One and Two Dimensions, Clarendon Press, Oxford, p. 492.
Google Scholar - ForsenS. and HoffmanR.A. (1963) J. Chem. Phys., 39, 2892–2901.
Google Scholar - GrzesiekS. and BaxA. (1993a) J. Am. Chem. Soc., 115, 12593–12594.
Google Scholar - GrzesiekS. and BaxA. (1993b) J. Biomol. NMR, 3, 185–204.
PubMed Google Scholar - GutowskyH.S., McCallD.W. and SlichterC.P. (1953) J. Chem. Phys., 21, 279–292.
Google Scholar - GutowskyH.S. and SaikaA. (1953) J. Chem. Phys., 21, 1688–1694.
Google Scholar - HahnE.L. and MaxwellD.E. (1952) Phys. Rev., 88, 1070–1084.
Article Google Scholar - HullW.E. and SykesB.D. (1975) J. Chem. Phys., 63, 867–880.
Article Google Scholar - JohnB.K., PlantD., WebbP. and HurdR.E. (1992) J. Magn. Reson., 98, 200–206.
Google Scholar - KamathU. and ShriverJ.W. (1989) J. Biol. Chem., 264, 5586–5592.
PubMed Google Scholar - KayL.E., TorchiaD.A. and BaxA. (1989) Biochemistry, 28, 8972–8979.
PubMed Google Scholar - KayL.E., NicholsonL.K., DelaglioF., BaxA. and TorchiaD.A. (1992) J. Magn. Reson., 97, 359–375.
Google Scholar - Kay, L.E., Xu, G.Y. and Yamazaki, T. (1994) J. Magn. Reson. Ser. A, in press.
- LoganT.M., OlejniczakE.T., XuR.X. and FesikS.W. (1993) J. Biomol. NMR, 3, 225–231.
Article PubMed Google Scholar - MacuraS. and ErnstR.R. (1980) Mol. Phys., 41, 95–117.
Google Scholar - MarionD., IkuraM., TschudinR. and BaxA. (1989) J. Magn. Reson., 85, 393–399.
Google Scholar - McConnellH.M. (1958) J. Chem. Phys., 28, 430–431.
Google Scholar - McCoyM. and MuellerL. (1992) J. Am. Chem. Soc., 114, 2108–2112.
Google Scholar - MontelioneG.T. and WagnerG. (1989) J. Am. Chem. Soc., 111, 3096–3098.
Google Scholar - MorrisG.A. and FreemanR. (1979) J. Am. Chem. Soc., 101, 760–762.
Google Scholar - OttingG., LiepinshE. and WüthrichK. (1993) Biochemistry, 32, 3571–3582.
PubMed Google Scholar - PalmerIIIA.G., RanceM. and WrightP.E. (1991a) J. Am. Chem. Soc., 113, 4371–4380.
Google Scholar - PalmerIIIA.G., CavanaghJ., WrightP.E. and RanceM. (1991b) J. Magn. Reson., 93, 151–170.
Google Scholar - PalmerIIIA.G., SkeltonN.J., ChazinW.J., WrightP.E. and RanceM. (1992) Mol. Phys., 75, 699–711.
Google Scholar - PiottoM., SaudekV. and SklenarV. (1992) J. Biomol. NMR, 2, 661–665.
PubMed Google Scholar - ShakaA.J., KeelerJ., FrenkielT. and FreemanR. (1983) J. Magn. Reson., 52, 335–338.
Google Scholar - SklenarV., TorchiaD.A. and BaxA. (1987) J. Magn. Reson., 73, 375–379.
Google Scholar - SmallcombeS. (1993) J. Am. Chem. Soc., 15, 4776–4785.
Google Scholar - WiderG., NeriD. and WüthrichK. (1991) J. Biomol. NMR, 1, 93–98.
Google Scholar - Zhang, O. and Forman-Kay, J.D. (1994) Biochemistry, submitted for publication.
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Authors and Affiliations
- Protein Engineering Network Centres of Excellence, University of Toronto, M5S 1A8, Toronto, ON, Canada
Neil A. Farrow, Ouwen Zhang & Lewis E. Kay - Department of Molecular and Medical Genetics, University of Toronto, M5S 1A8, Toronto, ON, Canada
Neil A. Farrow, Ouwen Zhang & Lewis E. Kay - Department of Biochemistry, University of Toronto, M5S 1A8, Toronto, ON, Canada
Neil A. Farrow, Ouwen Zhang & Lewis E. Kay - Department of Chemistry, University of Toronto, M5S 1A8, Toronto, ON, Canada
Neil A. Farrow, Ouwen Zhang & Lewis E. Kay - Division of Biochemistry Research, Hospital for Sick Children, 555 University Avenue, M5G 1X8, Toronto, ON, Canada
Ouwen Zhang & Julie D. Forman-Kay
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- Neil A. Farrow
You can also search for this author inPubMed Google Scholar - Ouwen Zhang
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Farrow, N.A., Zhang, O., Forman-Kay, J.D. et al. A heteronuclear correlation experiment for simultaneous determination of 15N longitudinal decay and chemical exchange rates of systems in slow equilibrium.J Biomol NMR 4, 727–734 (1994). https://doi.org/10.1007/BF00404280
- Received: 25 April 1994
- Accepted: 27 May 1994
- Issue Date: September 1994
- DOI: https://doi.org/10.1007/BF00404280