RNA binding properties of core protein of the flavivirus Kunjin (original) (raw)
References
Brinton MA, Dispoto JH (1988) Sequence and secondary structure analysis of the 5′-terminal region of flavivirus genome RNA. Virology 162: 290–299 PubMed Google Scholar
Brinton MA, Fernandez V, Dispoto JH (1986) The 3′-nucleotides of flavivirus genomic RNA from a conserved secondary structure. Virology 153: 113–121 PubMed Google Scholar
Chambers TJ, Hahn CS, Galler R, Rice CM (1990) Flavirus genome organization, expression, and replication. Annu Rev Microbiol 44: 649–688 PubMed Google Scholar
Citovsky V, Knorr D, Schuster G, Zambryski P (1990) The P30 movement protein of tobacco mosaic virus is a single-strand nucleic acid binding protein. Cell 60: 637–647 PubMed Google Scholar
Coia G, Parker MD, Speight G, Byrne ME, Westaway EG (1988) Nucleotide and complete amino acid sequences of Kunjin virus: definitive gene order and characteristics of the virus-specified proteins. J Gen Virol 69: 1–21 PubMed Google Scholar
Duggal R, Hall TC (1993) Identification of domains in brome mosaic virus RNA-1 and coat protein necessary for specific interaction and encapsidation. J Virol 67: 6406–6412 PubMed Google Scholar
Forsell K, Suomalainen M, Garoff H (1995) Structure-function of the NH2-terminal domain of the Semliki Forest virus capsid protein. J Virol 69: 1556–1563 PubMed Google Scholar
Geigenmüller-Gnirke U, Nitschko H, Schlesinger S (1993) Deletion analysis of the capsid protein of Sindbis virus: identification of the binding region. J Virol 67: 1620–1626 PubMed Google Scholar
Gött P, Stohwasser R, Schnitzler P, Darai G, Bautz EKF (1993) RNA binding of recombinant nucleocapsid proteins of hantaviruses. Virology 194: 332–337 PubMed Google Scholar
Hahn CS, Hahn YS, Rice CM, Lee E, Dalgarno L, Strauss EG, Strauss JH (1987) Conserved elements in the 3′ untranslated region of flavivirus RNAs and potential cyclization sequences. J Mol Biol 198: 33–41 PubMed Google Scholar
Hase T, Summers PL, Eckels KH, Putnak JR (1989) Morphogenesis of flaviviruses. In: Harris JR (ed) Subcellular biochemistry, vol 15. Plenum, New York London, pp 275–305 Google Scholar
Khromykh AA, Westaway EG (1994) Completion of Kunjin virus RNA sequence and recovery of an infectious RNA transcribed from stably cloned full-length cDNA. J Virol 68: 4580–4588 PubMed Google Scholar
Masters PS (1992) Localization of an RNA-binding domain in the nucleocapsid protein of the coronavirus mouse hepatitis virus. Arch Virol 125: 141–160 PubMed Google Scholar
Mohan PM, Padmanabhan R (1991) Detection of stable secondary structure at the 3′ terminus of dengue virus type 2 RNA. Gene 108: 185–191 PubMed Google Scholar
Nelson GW, Stohlman SA (1993) Localization of the RNA-binding domain of mouse hepatitis virus nucleocapsid protein. J Gen Virol 74: 1975–1979 PubMed Google Scholar
Nowak T, Färber PM, Wengler G, Wengler G (1988) Analysis of the terminal sequences of West Nile virus structural proteins and of the in vitro translation of these proteins allow the proposal of a complete scheme of the proteolytic cleavages involved in their synthesis. Virology 169: 365–376 Google Scholar
Pardigon N, Strauss JH (1991) Cellular proteins bind to the 3′ end of Sindbis virus minus-strand RNA. J Virol 66: 1007–1015 Google Scholar
Reusken CBEM, Neelman L, Bol JF (1994) The 3′-untranslated region of alfalfa mosaic virus RNA 3 contains at least two independent binding sites for viral coat protein. Nucleic Acids Res 22: 1346–1353 PubMed Google Scholar
Rice CM, Lenches EM, Eddy SR, Shin SJ, Sheets RL, Strauss JH (1985) Nucleotide sequence of yellow fever virus: implications for flavivirus gene expression and evolution. Science 229: 726–733 PubMed Google Scholar
Santolini E, Migliaccio G, Monica NL (1994) Biosynthesis and biochemical properties of the hepatitis C virus core protein. J Virol 68: 3631–3646 PubMed Google Scholar
Speight G, Westaway EG (1989) Carboxy-terminal analysis of nine proteins specified by the flavivirus Kunjin: evidence that only the intracellular core protein is truncated. J Gen Virol 70: 2209–2214 PubMed Google Scholar
Stohlman SA, Baric RS, Nelson GN, Soc LH, Welter LM, Deans RJ (1988) Specific interactions between coronavirus leader RNA and nucleocapsid protein. J Virol 62: 4288–4295 PubMed Google Scholar
Wei N, Morris TJ (1991) Interactions between viral coat protein and a specific binding region on turnip crinkle virus RNA. J Mol Biol 222: 437–443 PubMed Google Scholar
Wei N, Hacker DL, Morris TJ (1992) Characterization of an internal element in turnip crinkle virus RNA involved in both coat protein binding and replication. Virology 190: 346–355 PubMed Google Scholar
Weiss B, Geigenmüller-Gnirke U, Schlesinger S (1994) Interactions between Sindbis virus RNAs and a 68 amino acid derivative of the viral capsid protein further defines the capsid binding site. Nucleic Acids Res 22: 780–786 PubMed Google Scholar
Wengler G, Castle E (1986) Analysis of structural properties which possibly are characteristic for the 3′-terminal sequence of the genome RNA of flaviviruses. J Gen Virol 67: 1189–1194 PubMed Google Scholar
Westaway EG (1980) Replication of flaviviruses. In: Schlesinger RW (ed) The togaviruses. Biology, structure, replication. Academic Press, New York, pp 531–581 Google Scholar
Westaway EG (1987) Flavivirus replication strategy. Adv Virus Res 33: 45–90 PubMed Google Scholar