TheAdh genomic region ofDrosophila ambigua: Evolutionary trends in different species (original) (raw)

• Ashburner M, Bodmer M, Lemeunier F (1984) On the evolutionary relationships of_Drosophila melanogaster_. Dev Genet 4:295–312
  Google Scholar
• Atkinson P, Mills W, Starmer LE, Sullivan DT (1988) Structure and evolution of the_Adh_ genes of_Drosophila mojavensis_. Genetics 120:713–723
  PubMed Google Scholar
• Batterham P, Chambers GK, Starmer WT, Sullivan DT (1984) Origin and expression of an alcohol dehydrogenase duplication in the genus_Drosophila_. Evolution 38:644–657
  Google Scholar
• Benton WD, Davis RW (1977) Screening lambda-gt recombinant clones by hybridization to single plaques in situ. Science 196:180–182
  PubMed Google Scholar
• Benyajati C, Place A, Powers D, Sofer W (1981) Alcohol dehydrogenase gene of_D. melanogaster_: relationship to intervening sequences to functional domains in the protein. Proc Natl Acad Sci USA 78:2717–2721
  PubMed Google Scholar
• Benyajati C, Spoerel N, Haymerle H, Ashburner M (1983) The messenger RNA for alcohol dehydrogenase in_Drosophila melanogaster_ differs in its 5′ end in different developmental stages. Cell 33:125–133
  PubMed Google Scholar
• Bodmer M, Ashburner M (1984) Conservation and change in the DNA sequences coding for_Adh_ in sibling species of_Drosophila_. Nature 309:425–430
  PubMed Google Scholar
• Cabrera VM, González AM, Larruga JM, Gullon A (1983) Genetic distance and evolutionary relationships in the_Drosophila obscura_ group. Evolution 37:675–689
  Google Scholar
• Cacone A, Powell JR (1990) Extreme rates and heterogeneity in insect DNA evolution. J Mol Evol 30:273–280
  PubMed Google Scholar
• Caccone A, Amato GD, Powell JR (1988) Rates and patterns of scnDNA and mtDNA divergence within the_Drosophila melanogaster_ subgroup. Genetics 118:671–683
  PubMed Google Scholar
• Chambers GK (1988) The_Drosophila_ alochol dehydrogenase gene-enzyme system. In: Caspari EW, Scandalios JG (ed) Advances in genetics, vol 25. Academic Press, New York, pp 39–107
  Google Scholar
• Chirgwin JM, Przybyla AE, MacDonald RJ, Rutter WJ (1979) Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 18:5294–5299
  PubMed Google Scholar
• Cohn VH, Moore GP (1988) Organization and evolution of the alcohol dehydrogenase gene in_Drosophila_. Mol Biol Evol 5:154–166
  PubMed Google Scholar
• Coyne JA, Kreitman M (1986) Evolutionary genetics of two sibling species,Drosophila simulans and_Drosophila sechellia_. Evolution 40:673–691
  Google Scholar
• Devereux J, Haeberli P, Smithies O (1984) A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res 12:387–395
  PubMed Google Scholar
• Duester G, Jornvall H, Hatfield GW (1986) Intron-dependent evolution of the nucleotide-binding domains within alcohol dehydrogenase and related enzymes. Nucleic Acids Res 14: 1931–1941
  PubMed Google Scholar
• Feinberg AP, Vogelstein B (1983) A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13
  PubMed Google Scholar
• Feng DF, Johnson MS, Doolittle RF (1985) Aligning amino acid sequence: comparison of commonly used methods. J Mol Evol 21:112–125
  Google Scholar
• Fisher JA, Maniatis T (1985) Structure and transcription of the_Drosophila mulleri_ alcohol dehydrogenase genes. Nucleic Acids Res 13:6899–6917
  PubMed Google Scholar
• Fischer JA, Maniatis T (1988)Drosophila Adh: a promoter element expands the tissue specificity of an enhancer. Cell 53: 451–461
  PubMed Google Scholar
• Frischauf A-M, Lehrach H, Poustska A, Murray N (1983) Lambda replacement vectors carrying polylinker sequences. J Mol Biol 170:827–842
  PubMed Google Scholar
• Goldberg DA (1980) Isolation and partial characterization of the_Drosophila_ alcohol dehydrogenase gene. Proc Natl Acad Sci USA 77:5794–5798
  PubMed Google Scholar
• Heberlein U, England B, Tjian R (1985) Characterization of_Drosophila_ transcription factors that activate the tandem promoters of the alcohol dehydrogenase gene. Cell 41:965–977
  PubMed Google Scholar
• Henikoff S (1984) Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing. Gene 28:351–359
  PubMed Google Scholar
• Hernández JJ, Vilageliu LL, Gonzàlez-Duarte R (1988) Functional and biochemical features of alcohol dehydrogenase in four species of the_obscura_ group of_Drosophila_. Genetica 77: 15–24
  PubMed Google Scholar
• Holmquist R, Cantor C, Jukes T (1972) Improved procedures for comparing homologous sequences in molecules of protein and nucleic acids. J Mol Biol 64:145–161
  PubMed Google Scholar
• Hopp TP, Woods KR (1981) Prediction of protein antigenic determinants from amino acid sequences. Proc Natl Acad Sci USA 78:3824–3828
  PubMed Google Scholar
• Jukes TH, Cantor CR (1969) Evolution of protein molecules. In: Munro HN (ed) Mammalian protein metabolism, vol. 3. Academic Press, New York, pp 21–132
  Google Scholar
• Kreitman M (1983) Nucleotide polymorphism at the alcohol dehydrogenase locus of_Drosophila melanogaster_. Nature 304: 412–417
  PubMed Google Scholar
• Lakovaara S, Saura A (1982) Evolution and speciation in the_Drosophila obscura_ group. In: Ashburner M, Carson HL, Thompson JNS (eds) The genetics and biology of_Drosophila_, vol 3b. Academic Press, London, pp 2–9
  Google Scholar
• Loukas M, Krimbas CB, Vergini Y (1984) Evolution of the_obscura_ group_Drosophila_ species. II. Phylogeny of ten species based on electrophoretic data. Heredity 53:483–493
  Google Scholar
• Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual, ed 1. Cold Spring Harbor Laboratory, Cold Spring Harbor NY
  Google Scholar
• Miyata T (1982) Evolutionary changes and functional constraints in DNA sequences. In: Kimura M (ed) Molecular evolution and the neutral theory. Japan Scientific Societies Press, Tokyo, pp 233–266
  Google Scholar
• Nevins JR (1983) The pathway of eucaryotic mRNA formation. Annu Rev Biochem 52:441–466
  PubMed Google Scholar
• Oakeshott J, Chambers G, East P, Gibson J, Barker J (1982) Evidence for a genetic duplication involving_Adh_ in_D. buzatti_ and related species. Aust J Biol Sci 35:73–84
  Google Scholar
• O'Donnell J, Mandel HC, Krauss M, Sofer W (1977) Genetic and cytogenetic analysis of the ADH region in_Drosophila melanogaster_. Genetics 86:553–566
  PubMed Google Scholar
• Rigby PWJ, Dieckmann M, Rhodes C, Berg P (1977) Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase. I. J Mol Biol 113:237–251
  PubMed Google Scholar
• Rowan R, Dickinson WJ (1988) Nucleotide sequence of the genomic region coding for alcohol dehydrogenase in_Drosophila affinidisjuncta_. J Mol Evol 28:43–54
  PubMed Google Scholar
• Sanger F, Nicklen S, Coulson AR (1977) DNA sequencing with chain-terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467
  PubMed Google Scholar
• Schaeffer SW, Aquadro CF (1987) Nucleotide sequence of the_Adh_ gene region of_Drosophila pseudoobscura_: evolutionary changes and evidence for an ancient gene duplication. Genetics 117:61–73
  PubMed Google Scholar
• Sharp PM, Li W-H (1989) On the rate of DNA sequence evolution in_Drosophila_. J Mol Evol 28:398–402
  PubMed Google Scholar
• Sofer W, Martin PF (1987) Analysis of alcohol dehydrogenase gene expression in_Drosophila_. Annu Rev Genet 21:203–225
  PubMed Google Scholar
• Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503–517
  PubMed Google Scholar
• Steinemann M, Pinsker W, Sperlich D (1984) Chromosome homologies within the_Drosophila obscura_ group probed by in situ hybridization. Chromosoma 91:46–52
  Google Scholar
• Sullivan DT, Atkinson PW, Starmer WT (1990) Molecular evolution of the alcohol dehydrogenase genes in the genus_Drosophila_. In: Hecht MK, Wallace B, MacIntyre RJ (ed) Evolutionary biology. Plenum, New York, pp 107–147
  Google Scholar
• Thatcher DR (1980) The complete amino acid sequence of three alcohol dehydrogenase alleloenzymes (Adhn−11, Adhs and Adhuf) from the fruitfly_D. melanogaster_. Biochem J 187: 875–886
  PubMed Google Scholar
• Throckmorton L (1975) The phylogeny, ecology, and geography of_Drosophila_. In: King RC (ed) Handbook of genetics, vol. 3. Plenum, New York, pp 421–469
  Google Scholar
• Visa N, Marfany G, Vilageliu LL, Albalat R, Atrian S, Gonzàlez-Duarte R (1991) The_Adh_ locus in_Drosophila_: chromosomal location and restriction analysis in species with different phylogenetic relationships. Chromosoma (in press)