Conservation of primary structure in the hisI gene of the archaebacterium, Methanococcus vannielii, the eubacterium Escherichia coli, and the eucaryote Saccharomyces cerevisiae (original) (raw)
References
Balch WE, Fox GE, Magrum LJ, Woese CR, Wolfe RS (1979) Methanogens: Re-evaluation of a unique biological group. Microbiol Rev 43:260–296 Google Scholar
Betlach M, Friedman J, Boyer HB, Pfeifer F (1984) Characterization of a halobacterial gene affecting bacterio-opsin gene expression. Nucl Acids Res 12:7949–7959 Google Scholar
Bollschweiler C, Kuhn R, Klein A (1985) Non-repetitive AT-rich sequences are found in intergenic regions of Methanococcus voltae DNA. EMBO J 4:805–809 Google Scholar
Brenner M, Ames BN (1971) The histidine operon and its regulation. In: Vogel HS (ed) Metabolic pathways, vol 5. Academic Press Inc, New York, pp 349–387 Google Scholar
Broach JR (1981) Genes of Saccharomyces cerevisiae. In: Strathern JN, Jones EW, Broach JR (eds) The molecular biology of the yeast Saccharomyces. Life cycle and inheritance. Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, pp 653–727 Google Scholar
Bruni CB, Carlomagno MS, Formisano S, Paolella G, Fink GR (1986) Primary and secondary structural homologies between the _his_4 gene product of Saccharomyces cerevisiae and the _his_IE and _his_D gene products of Escherichia coli and Salmonella typhimurium. Mol Gen Genet 203:389–396 Google Scholar
Chiariotti L, Alifano P, Carlomagno MS, Bruni CB (1986) Nucleotide sequence of the _Escherichia coli his_D gene and of the Escherichia coli and _Salmonella typhimurium his_IE region. Mol Gen Genet 203:382–388 Google Scholar
Cue D, Beckler GS, Reeve JN, Konisky J (1985) Structure and sequence divergence of two archaebacterial genes. Proc Natl Acad Sci USA 82:4207–4211 Google Scholar
Daniels CJ, Gupta R, Doolittle WF (1985a) Transcription and excision of a large intron in the tRNAtrp gene of an archaebacterium, Halobacterium volcanii. J Biol Chem 260:3132–3134 Google Scholar
Daniels CJ, Hofman JD, MacWilliam JG, Doolittle WF, Woese CR, Leuhrsen KR, Fox GE (1985b) Sequence of 5S ribosomal RNA gene regions and their products in the archaebacterium Halobacterium volcanii. Mol Gen Genet 198:270–274 Google Scholar
Davis RW, Botstein D, Roth JR (1980) Advanced bacterial genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York Google Scholar
Donahue TF, Farabaugh PJ, Fink GR (1982) The nucleotide sequence of the _his_4 region of yeast. Gene 18:47–59 Google Scholar
Dunn R, McCoy J, Simsek M, Majumdar A, Chang SH, RajBhandary UL, Khorana HG (1981) The bacteriorhodopsin gene. Proc Natl Acad Sci USA 78:6744–6748 Google Scholar
Fox GE, Magrum LJ, Balch WE, Wolfe RS, Woese CR (1977) Classification of methanogenic bacteria by 16S ribosomal RNA characterization. Proc Natl Acad Sci USA 74:4537–4541 Google Scholar
Goldschmidt EP, Carter MS, Matney TS, Butler MA, Greene A (1970) Genetic analysis of the histidine operon in Escherichia coli K-12. Genetics 66:219–229 Google Scholar
Grisolia V, Carlomagno MS, Bruni CB (1982) Cloning and expression of the distal portion of the histidine operon of Escherichia coli K-12. J Bacteriol 151:692–700 Google Scholar
Hamilton PT, Reeve JN (1985) Structure of genes and an insertion element in the methane producing archaebacterium Methano-brevibacter smithii. Mol Gen Genet 200:47–59 Google Scholar
Hinnebusch AG, Fink GR (1983) Repeated DNA sequences upstream from _his_1 also occur at several other co-regulated genes in Saccharomyces cerevisiae. J Biol Chem 258:5238–5247 Google Scholar
Hook LA, Corder RE, Hamilton PT, Frea JI, Reeve JN (1984) Development of a plating system for genetic exchange studies in methanogens using a modified ultra-low oxygen chamber. In: Strohl WR, Tuovinen OH (eds) Microbial chemoautotrophy. The Ohio State University Press, Columbus, pp 275–289 Google Scholar
Hope IA, Struhl K (1985) GCN4 protein, synthesized in vitro binds _his_3 regulatory sequences: implications for general control of amino acid biosynthetic genes in yeast. Cell 43:177–188 Google Scholar
Hui I, Dennis PP (1985) Characterization of the ribosomal RNA gene clusters in Halobacterium cutirubrum. J Biol Chem 260:899–906 Google Scholar
Jarsch M, Böck A (1983) DNA sequence of the 16S rRNA/23S rRNA intercistronic spacer of the two rDNA operons of the archaebacterium Methanococcus vannielii. Nucl Acids Res 11:7537–7544 Google Scholar
Jarsch M, Böck A (1985) Sequence of the 23S rRNA gene from the archaebacterium Methanococcus vannielii: evolutionary and functional implications. Mol Gen Genet 200:305–312 Google Scholar
Kaine BP, Gupta R, Woese CR (1983) Putative introns in the tRNA genes of prokaryotes. Proc Natl Acad Sci USA 80:3309–3312 Google Scholar
Kjems J, Garrett RA (1985) An intron in the 23S ribosomal RNA gene of the archaebacterium Desulfurococcus mobilis. Nature 318:675–677 Google Scholar
Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning, a laboratory manual. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York Google Scholar
Martin RG, Berberich MA, Ames BN, Davis WW, Goldberger RF, Yourno JD (1971) Enzymes and intermediates in the histidine biosynthesis of Salmonella typhimurium. Methods Enzymol 17B:3–44 Google Scholar
Maxam AM, Gilbert W (1980) Sequencing end-labeled DNA with base specific chemical cleavage. Methods Enzymol 65:499–580 Google Scholar
Neumann H, Gierl A, Tu J, Leibrock J, Staiger D, Zillig W (1983) Organization of the genes for ribosomal RNA in archaebacteria. Mol Gen Genet 192:66–72 Google Scholar
Reeve JN (1979) Use of minicells for bacteriophage-directed polypeptide synthesis. Methods Enzymol 68:493–511 Google Scholar
Reeve JN, Hamilton PT, Beckler GS, Morris CJ, Clarke CH (1986) Structure of methanogen genes. Syst Appl Microbiol 231: in press
Shine J, Dalgarno L (1974) The 3′-terminal sequence of Escherichia coli 16S ribosomal RNA: complementarity to nonsense triplets and ribosome binding sites. Proc Natl Acad Sci USA 71:1342–1346 Google Scholar
Stackebrandt E (1985) Phylogeny and phylogenetic classification of prokaryotes. In: Schleifer KH, Stackebrandt E (eds) Evolution of prokaryotes. Academic Press, London, pp 309–334 Google Scholar
Vieira J, Messing J (1982) The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 19:259–268 Google Scholar
Wich G, Jarsch M, Böck A (1984) Apparent operon for a 5S ribosomal RNA gene and for tRNA genes in the archaebacterium Methanococcus vannielii. Mol Gen Genet 196:146–151 Google Scholar
Wilson AC (1985) The molecular basis of evolution. Sci Am 253:164–173 Google Scholar
Woese CR (1985) Why study evolutionary relationships among bacteria?. In: Schleifer KH, Stackenbrandt E (eds) Evolution of prokaryotes. Academic Press, London, pp 1–30 Google Scholar
Woese CR, Fox GF (1977) Phylogenetic structure of the prokaryotic domain: the primary kingdoms. Proc Natl Acad Sci USA 74:5088–5090 Google Scholar
Woese CR, Wolfe RS (1985) Epilogue: Archaebacteria: the Urkingdom. The Bacterial vol 8. Academic Press. New York, pp 561–564 Google Scholar
Woese CR, Magrum LJ, Fox GE (1978) Archaebacteria. J Mol Evol 11:245–252 Google Scholar