Genetic variants in PCSK9 affect the cholesterol level in Japanese (original) (raw)
- Short Communication
- Published: 01 February 2004
- Toshifumi Mannami3,
- Yoshihiro Kokubo3,
- Nozomu Inamoto3,
- Shuichi Takagi4,
- Yoichi Goto4,
- Hiroshi Nonogi4 &
- …
- Naoharu Iwai1
Journal of Human Genetics volume 49, pages 109–114 (2004)Cite this article
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Abstract
Mutations in the proprotein convertase subtilisin/kexin 9 (PCSK9) gene have been reported in affected members of two families with autosomal dominant hypercholesterolemia. To investigate the effects of common variants in PCSK9 on the cholesterol level, we conducted an association study using a large cohort representing the general population in Japan (_n_=1,793). Direct sequencing in all of the exonic regions identified 21 polymorphisms. After consideration of linkage disequilibrium among these polymorphisms, we selected and genotyped nine polymorphisms by the TaqMan method. The intron 1/C(-161)T and exon 9/I474 V polymorphisms were associated with levels of total cholesterol (TC) [C(-161)T, _P_=0.0285; I474 V, _P_=0.0069] and low-density lipoprotein cholesterol (LDL-C) [C(-161)T, _P_=0.0257; I474 V, _P_=0.0007]. The distributions of these polymorphisms in subjects with miocardial infarction (MI) (_n_=649) were not different from those in the control population. These results provide the first evidence that common variants intron 1/C(-161)T and exon 9/I474 V in PCSK9 significantly affect TC and LDL-C levels in the general population in Japan.
References
- Abifadel M, Varret M, Rabes JP, Allard D, Ouguerram K, Devillers M, Cruaud C, et al (2003) Mutations in PCSK9 cause autosomal dominant hypercholesterolemia. Nat Genet 34:154–156
Article CAS Google Scholar - Brown MS, Goldstein JL (1999) A proteolytic pathway that controls the cholesterol content of membranes, cells, and blood. Proc Natl Acad Sci USA 96:11041–11048
Article CAS Google Scholar - Ioannidis JPA, Ntzani EE, Trikalinos TA, Contopoulos-Ioannidis DG (2001) Replication validity of genetic association studies. Nat Genet 29:306–309
Article CAS Google Scholar - Kannel WB, Castelli WP, Gordon T (1979) Cholesterol in the prediction of atherosclerotic disease. New perspectives based on the Framingham study. Ann Intern Med 90:85–91
Article CAS Google Scholar - Mannami T, Konishi M, Baba S, Nishi N, Terao A (1997) Prevalence of asymptomatic carotid atherosclerotic lesions detected by high-resolution ultrasonography and its relation to cardiovascular risk factors in the general population of a Japanese city: the Suita study. Stroke 28:518–525
Article CAS Google Scholar - Maxwell KN, Soccio RE, Duncan EM, Sehayek E, Breslow JL (2003) Novel putative SREBP and LXR target genes identified by microarray analysis in liver of cholesterol-fed mice. J Lipid Res 44(11):2109–2119
Article CAS Google Scholar - Seidah NG, Benjannet S, Wickham L, Marcinkiewicz J, Jasmin SB, Stifani S, Basak A, Prat A, Chretien M (2003) The secretory proprotein convertase neural apoptosis-regulated convertase 1 (NARC-1): liver regeneration and neuronal differentiation. Proc Natl Acad Sci USA 100:928–933
Article CAS Google Scholar - Shioji K, Kokubo Y, Mannami T, Inamoto N, Morisaki H, Mino Y, Tago N, Yasui N, Iwai N (2004) Association between hypertension and the α-adducin, β1-adrenoreceptor and G-protein β3 subunit genes in the Japanese population; The Suita Study. Hypertens Res (in press)
- Takagi S, Iwai N, Yamauchi R, Kojima S, Yasuno S, Baba T, Terashima M, Tsutsumi Y, Suzuki S, Morii I, Hanai S, Ono K, Baba S, Tomoike H, Kawamura A, Miyazaki S, Nonogi H, Goto Y (2002) Aldehyde dehydrogenase 2 gene is a risk factor for myocardial infarction in Japanese men. Hypertens Res 25:677–681
Article CAS Google Scholar
Acknowledgements
This study was supported by the Program for the Promotion of Fundamental Studies in Health Science of the Organization for Pharmaceutical Safety and Research of Japan. We are very grateful to Dr. Soichiro Kitamura, President of the National Cardiovascular Center, for his support of our research. We would like to thank Dr. Otosaburo Hishikawa, Dr. Katsuyuki Kawanishi, and Mr. Shigeru Kobayashi for their continuous support of our population survey in Suita City. We also thank the members of the Satsuki-Junyukai.
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Authors and Affiliations
- Department of Epidemiology, Research Institute, National Cardiovascular Center, 5-7-1 Fujishirodai Suita, Osaka 565-8565, Japan
Keisuke Shioji & Naoharu Iwai - The Organization for Pharmaceutical Safety and Research of Japan, Tokyo, Japan
Keisuke Shioji - Department of Preventive Cardiology, National Cardiovascular Center, Osaka, Japan
Toshifumi Mannami, Yoshihiro Kokubo & Nozomu Inamoto - Division of Cardiology, National Cardiovascular Center, Osaka, Japan
Shuichi Takagi, Yoichi Goto & Hiroshi Nonogi
Authors
- Keisuke Shioji
- Toshifumi Mannami
- Yoshihiro Kokubo
- Nozomu Inamoto
- Shuichi Takagi
- Yoichi Goto
- Hiroshi Nonogi
- Naoharu Iwai
Corresponding author
Correspondence toNaoharu Iwai.
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Shioji, K., Mannami, T., Kokubo, Y. et al. Genetic variants in PCSK9 affect the cholesterol level in Japanese.J Hum Genet 49, 109–114 (2004). https://doi.org/10.1007/s10038-003-0114-3
- Received: 29 September 2003
- Accepted: 17 November 2003
- Published: 01 February 2004
- Issue Date: February 2004
- DOI: https://doi.org/10.1007/s10038-003-0114-3