A Digital Image-Based Method for Computational Tissue Fate Mapping During Early Avian Morphogenesis (original) (raw)
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References
- Beloussov, L., J. Dorfman, and V. Cherdantzev. Mechanical stresses and morphological patterns in amphibian embryos. J. Embryol. Exp. Morphol. 34(3):559–574, 1975.
CAS PubMed Google Scholar - Czirók, A., B. Rongish, and C. Little. Extracellular matrix dynamics during vertebrate axis formation. Dev. Biol. 268:111–122, 2004.
Article PubMed Google Scholar - Czirók, A., P. Rupp, B. R.ongish, and C. Little. Multi-field 3D scanning light microscopy of early embryogenesis. J. Microsc. 206:209–217, 2002.
Article PubMed MathSciNet Google Scholar - Elul, T., M. Koehl, and R. Keller. Cellular mechanism underlying neural convergent extension in Xenopus laevis embryos. Dev. Biol. 191(2):243–258, 1997.
Article CAS PubMed Google Scholar - Filla, M. B., A. Czirók, E. A. Zamir, C. D. Little, T. J. Cheuvront, and B. J. Rongish. Dynamic imaging of cell, extracellular matrix, and tissue movements during avian vertebral axis patterning. Birth Defects Res Part C Embryo Today 72(3):267–276, 2004.
Article CAS Google Scholar - Eraser, S., and R. Harland. The molecular metamorphosis of experimental embryology. Cell 100:41–55, 2000.
Article CAS PubMed Google Scholar - Gilbert, S. Developmental Biology, 7th ed., Sunderland, MA: Sinauer Associates, 2003.
Google Scholar - Glickman, N. S., C. B. Kimmel, M. A. Jones, and R. J. Adams. Shaping the zebrafish notochord. Development 130(5):873–887, 2003.
Article CAS PubMed Google Scholar - Hamburger, V., and H. Hamilton. A Series of Normal Stages in the Development of the Chick Embryo. J. Morphol. 88:49–92, 1951.
Article Google Scholar - Helmke, B., A. Rosen, and P. Davies. Mapping mechanical strain of an endogenous ctyoskeletal network in living endothelial cells. Biophys. J. 84:2691–2699, 2003.
CAS PubMed Google Scholar - Jacob, M., and M. Unser. Design of Steerable Filters for Feature Detection Using Canny-Like Criteria. IEEE Transactions on Pattern Analysis and Machine Intelligence 26(8):1007–1019, 2004.
Article PubMed Google Scholar - Keller, R., L. Davidson, and D. Shook. How we are shaped: The biomechanics of gastrulation. Differentiation 71:171–205, 2003.
Article PubMed Google Scholar - Keller, R. Shaping the vertebrate body plan by polarized embryonic cell movements. Science 298(5600):1950–1954, 2002.
Article CAS PubMed Google Scholar - Keller, R., L. Davidson, A. Edlund, T. Elul, M. Ezin, D. Shook, and P. Skoglund. Mechanisms of convergence and extension by cell intercalation. Philos Trans R Soc Lond B Biol Sci 355(1399):897–922, 2000.
Article CAS PubMed Google Scholar - Little, C., and C. Drake. Whole-mount immunolabeling of embryos by microinjection. Meth. Mol. Biol. 135:183–189, 2000.
CAS Google Scholar - Meijering, E., J. Wiro, and M. Viergever. quantitative evaluation of convolution-based methods for medical image interpolation. Med. Image Anal. 5:111–126, 2001.
Article CAS PubMed Google Scholar - Persson, P., and G. Strang. A simple mesh generator in MATLAB. SIAM Rev. 46:329–345, 2004.
MathSciNet Google Scholar - Raffel, M., C. Willert, and J. Kompenhans. Particle Image Velocimetry, Berlin: Springer-Verlag, 1998.
- Rongish, B., C. Drake, W. Argraves, and C. Little. Identification of the developmental marker, JB3-Antigen, as Fibrillin-2 and its de novo organization into embryonic microfibrous arrays. Dev. Dyn. 212:461–471, 1998.
Article CAS PubMed Google Scholar - Rupp, P., A. Czirók, and C. Little. αvβ3 integrin-dependent endothelial cell dynamics in vivo. Development 131:2887–2897, 2004.
Article CAS PubMed Google Scholar - Rupp, P., A. Czirók, and C. Little. Novel approaches for the study of vascular assembly and morphogenesis in avian embryos. Trends Cardiovasc. Med. 13:283–288, 2003a.
Article Google Scholar - Rupp, P., B. Rongish, A. Czirók, and C. Little. Culturing of avian embryos for time-lapse imaging. Biotechniques 34:274–278, 2003b.
CAS Google Scholar - Scarano, F. Iterative image deformation methods in PIV. Meas. Sci. Technol. 13:1–19, 2002.
Article Google Scholar - Vanni, S., C. Lagerholm, C. Otey, D. Taylor, and F. Lanni. Internet-based image analysis quantifies contractile behavior of individual fibroblasts inside model tissue. Biophys. J. 84:2715–2727, 2003.
CAS PubMed Google Scholar - Wang, C., J. Deng, G. Ateshian, and C. Hung. An automated approach for direct measurement of two-dimensional strain distributions within articular cartilage under unconfined compression. J. Biomech. Eng. 5:557–567, 2002.
Article Google Scholar - Zamir, E. A., and L. A. Taber. On the effects of residual stress in microindentation tests of soft tissue structures. J. Biomech. Eng. 126(2):276–283, 2004.
Article PubMed Google Scholar