Leucobacter kyeonggiensis sp. nov., a new species isolated from dye waste water (original) (raw)
References
Atlas, R.M. 1993. Handbook of Microbiological Media. In L.C. Parks (ed.), CRC Press, Boca Raton, Florida, USA. Google Scholar
Behrendt, A.U. and P. Schumann. 2008. Leucobacter tardus sp. nov., isolated from the phyllosphere of Solanum tuberosum. Int. J. Syst. Evol. Microbiol 58, 2574–2578. ArticlePubMedCAS Google Scholar
Brinkman, F.S., I. Wan, R.E. Hancock, A.M. Rose, and S.J. Jones. 2001. PhyloBLAST: facilitating phylogenetic analysis of BLAST results. Bioinformatics 17, 385–387. ArticlePubMedCAS Google Scholar
Cappuccino, J.G. and N. Sherman. 2002. Microbiology: a Laboratory Manual, 6th ed. Benjamin Cummings, San Francisco, USA. Google Scholar
Choi, J.H., H.Y. Jung, H.S. Kim, and H.G. Cho. 2000. PhyloDraw: a phylogenetic tree drawing system. Bioinformatics 16, 1056–1058. ArticlePubMedCAS Google Scholar
Collins, M.D. and D. Jones. 1981. Distribution of isoprenoid quinone structural types in bacteria and their taxonomic implications. Microbiol. Rev. 45, 316–354. PubMedCAS Google Scholar
Doetsch, R.N. 1981. Determinative methods of light microscopy. In Manual of Methods for General Bacteriology, p. 21–33. P. Gerhardt, R.G.E. Murray, R.N. Costilow, E.W. Nester, W.A. Wood, N.R. Krieg and G.H. Phillips (eds.), American Society for Microbiology, Washington, D.C., USA. Google Scholar
Ezaki, T., Y. Hashimoto, and E. Yabuuchi. 1989. Fluorometric DNA-DNA hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int. J. Syst. Evol. Microbiol. 39, 224–229. Google Scholar
Felsenstein, J. 1985. Confidence limit on phylogenies: an approach using the bootstrap. Evolution 39, 783–791. Article Google Scholar
Fitch, W.M. 1971. Toward defining the course of evolution: minimum change for a specific tree topology. Syst. Zool. 20, 406–416. Article Google Scholar
Hall, T.A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symp. Ser. 41, 95–98. CAS Google Scholar
Halpern, M., T. Shaked, R. Pukall, and P. Schumann. 2009. _Leucobacter chironomi_sp. nov., a chromate-resistant bacterium isolated from a chironomid egg mass. Int. J. Syst. Evol. Microbiol 59, 665–670. ArticlePubMedCAS Google Scholar
Kim, M.K., W.-T. Im, H. Ohta, M. Lee, and S.-T. Lee. 2005. Sphingopyxis granuli sp. nov., a _β_-glucosidase producing bacterium in the family Sphingomonadaceae in _α_-4 subclass of the Proteobacteria. J. Microbiol. 43, 152–157. PubMedCAS Google Scholar
Kimura, M. 1983. The Neutral Theory of Molecular Evolution. Cambridge University Press, Cambridge, UK. Google Scholar
Komagata, K., and K. Suzuki. 1987. Lipids and cell-wall analysis in bacterial systematics. Methods Microbiol. 19, 161–203. ArticleCAS Google Scholar
Kumar, S., K. Tamura, and M. Nei. 2004. MEGA3: integrated Software for Molecular Evolutionary Genetics Analysis and Sequence Alignment. Brief. Bioinform. 5, 150–163. ArticlePubMedCAS Google Scholar
Lin, Y.C., K. Uemori, D.A. Briel, V. Arunpairojana, and A. Yokota. 2004. Zimmermannella helvola gen. nov., sp. nov., Zimmermannella alba sp. nov., Zimmermannella bifida sp. nov., Zimmermannella faecalis sp. nov. and Leucobacter albus sp. nov., novel members of the family Microbacteriaceae. Int. J. syst. Evol. Microbiol. 54, 1669–1676. ArticlePubMedCAS Google Scholar
Martin, E., N. Lodders, U. Jacket, P. Schumann, and P. Kampfer. 2010. Leucobacter aerolatus sp. nov., from the air of a duck barn. Int. J, Syst. Evol. Microbiol. 60, 2838–2842. ArticleCAS Google Scholar
Mesbah, M., U. Premachandran, and W.B. Whitman. 1989. Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int. J. Syst. Bacteriol. 39, 159–167. ArticleCAS Google Scholar
Minnikin, D.E., A.G. O’Donnell, M. Goodfellow, G. Anderson, M. Athalye, A. Schaal, and J.H. Parlett. 1984. An integrated procedure for the extraction of bacterial isoprenoid quinones and polar lipids. J. Microbiol. Methods 2, 233–241. ArticleCAS Google Scholar
Morais, P.V., R. Francisco, R. Branco, A.P. Chung, and M.S. da Costa. 2004. Leucobacter chromiireducens sp. nov., and Leucobacter aridicollis sp. nov., two new species isolated from a chromium contaminated environment. Syst. Appl. Microbiol. 27, 646–652. ArticlePubMedCAS Google Scholar
Morais, P.V., C. Paulo, R. Francisco, R. Branco, A.P. Chung and M.S. da Costa. 2006. Leucobacter luti sp. nov., and Leucobacter alluvii sp. nov., two new species of the genus Leucobacter isolated under chromium stress. Syst. Appl. Microbiol. 29, 414–421. ArticlePubMedCAS Google Scholar
Muir, R.E., and M.W. Tan. 2007. Leucobacter chromiireducens subsp. solipctus subsp. nov., a pigmented bacterium isolated from the nematode Caenorhabditis elegans, and emended description of L. chromiireducens. Int. J. Syst. Evol. Microbiol. 57, 2770–2776. ArticlePubMedCAS Google Scholar
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Bio. Evol. 4, 406–425. CAS Google Scholar
Sasser, M. 1990. Identification of Bacteria by Gas Chromatography of Cellular Fatty Acids. MIDI Technical Note 101. MIDI Inc., Newark, DE, USA. Google Scholar
Schleifer, K.H. and O. Kandler. 1972. Peptidoglycan types of bacterial cell walls and their taxonomic implications. Bacteriol. Rev. 36, 407–477. PubMedCAS Google Scholar
Shin, N.R., M.S. Kim, M.J. Jung, S.W. Roh, Y.D. Nam, E.J. Park, and J.W., Bae. 2011. Leucobacter celer sp. nov., isolated from korean fermented seafood. Int. J. Syst. Evol. Microbiol. 61, 2353–2357. ArticlePubMedCAS Google Scholar
Shin, Y.K., J.-S. Lee, C.O. Chun, H.-J. Kim, and Y.-H. Park. 1996. Isoprenoid quinone profiles of the Leclercia adecarboxylata KCTC 1036T. J. Microbiol. Biotechnol. 6, 68–69. CAS Google Scholar
Somvanshi, V.S., E. Lang, P. Schumann, R. Pukall, R.M. Kroppenstedt, S. Ganguly and E. Stackebandt. 2007. Leucobacter iarius sp. nov., in the family Microbacteriaceae. Int. J.Syst. Evol. Microbiol. 57, 682–686. ArticlePubMedCAS Google Scholar
Sturm, G., J. Jacobs, C. Sproer, P. Schumann, and J. Gescher. 2011. Leucobacter chromiiresistens sp. nov., a chromate-resistant strain. Int. J. Syst. Evol. Microbiol. 61, 956–960. CAS Google Scholar
Takeuchi, M., N. Weiss, P. Schumann, and A. Yokota. 1996. Leucobacter komagatae gen. nov., sp. nov., a new aerobic gram-positive, nonsporulating rod with 2,4-diaminobutyric acid in the cell wall. Int. J. syst. Bacteriol. 46, 967–971. ArticlePubMedCAS Google Scholar
Tamaoka, J. and K. Komagata. 1984. Determination of DNA base composition by reversed phase high-performance liquid chromatography. FEMS Microbiol. Lett. 25, 125–128. ArticleCAS Google Scholar
Thompson, J.D., T.J. Gibson, F. Plewniak, F. Jeanmougin, and D.G. Higgins. 1997. The Clustal_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24, 4876–4882. Article Google Scholar
Ue, H. 2011. Leucobacter exalbidus sp. nov., an actinobacterium isolated from a mixed culture from compost. J. Gen. Appl. Microbiol. 57, 27–33. ArticlePubMedCAS Google Scholar
Wayne, L.G., D.J. Brenner, R.R. Colwell, P.A.D. Grimont, O. Kandler, M.I. Krichevsky, L.H. Moore, W.E.C. Moore, R.G.E. Murray and et al. 1987. International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int. J. Syst. Bacteriol. 37, 463–464. Article Google Scholar