Options available — from start to finish — for obtaining expression data by microarray (original) (raw)
Gress, T.M. et al. Hybridization fingerprinting of high–density cDNA–library arrays with cDNA pools derived from whole tissues. Mamm. Genome3, 609–619 ( 1992). ArticleCAS Google Scholar
Friemert, C., Erfle, V. & Strauss, G. Preparation of radiolabeled cDNA probes with high specific activity for rapid screening of gene expression. Methods Mol. Cell Biol. 1, 143–153 ( 1989). CAS Google Scholar
Schena, M., Shalon, D., Davis, R.W. & Brown, P.O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray [see comments]. Science270, 467–470 (1995). ArticleCAS Google Scholar
Shalon, D., Smith, S.J. & Brown, P.O. A DNA microarray system for analyzing complex DNA samples using two–color fluorescent probe hybridization. Genome Res.6, 639–645 ( 1996). ArticleCAS Google Scholar
Schena, M. et al. Parallel human genome analysis: microarray–based expression monitoring of 1000 genes. Proc. Natl Acad. Sci. USA93, 10614–10619 (1996). ArticleCAS Google Scholar
Derisi, J. et al. Use of a cDNA microarray to analyse gene expression patterns in human cancer. Nature Genet.14, 457– 460 (1996). ArticleCAS Google Scholar
DeRisi, J.L., Iyer, V.R. & Brown, P.O. Exploring the metabolic and genetic control of gene expression on a genomic scale. Science278, 680– 686 (1997). ArticleCAS Google Scholar
Lashkari, D.A. et al. Yeast microarrays for genome wide parallel genetic and gene expression analysis. Proc. Natl Acad. Sci. USA94, 13057–13062 (1997). ArticleCAS Google Scholar
Welford, S.M. et al. Detection of differentially expressed genes in primary tumor tissues using representational differences analysis coupled to microarray hybridization. Nucleic Acids Res.26, 3059 –3065 (1998). ArticleCAS Google Scholar
Heller, R.A. et al. Discovery and analysis of inflammatory disease–related genes using cDNA microarrays. Proc. Natl Acad. Sci. USA94, 2150–2155 (1997). ArticleCAS Google Scholar
Wodicka, L., Dong, H., Mittmann, M., Ho, M.H. & Lockhart, D.J. Genome–wide expression monitoring in Saccharomyces cerevisiae. Nature Biotechnol.15, 1359 –1367 (1997). ArticleCAS Google Scholar
Lockhart, D.J. et al. Expression monitoring by hybridization to high–density oligonucleotide arrays [see comments]. Nature Biotechnol.14, 1675–1680 (1996). ArticleCAS Google Scholar
Cho, R.J. et al. A genome–wide transcriptional analysis of the mitotic cell cycle. Mol. Cell.2, 65– 73 (1998). ArticleCAS Google Scholar
Cole, K.A., Krizman, D.B. & Emmert–Buck, M.R. The genetics of cancer—a 3D model. Nature Genet.21, 38–41 (1999). ArticleCAS Google Scholar
Kallioniemi, A. et al. Comparative genomic hybridization for molecular cytogenetic analysis of solid tumors. Science258, 818 –821 (1992). ArticleCAS Google Scholar
Schutze, K. & Lahr, G. Identification of expressed genes by laser–mediated manipulation of single cells [In Process Citation]. Nature Biotechnol.16, 737–742 (1998). ArticleCAS Google Scholar
Emmert–Buck, M.R. et al. Laser capture microdissection [see comments]. Science274, 998–1001 ( 1996). Article Google Scholar
Simone, N.L., Bonner, R.F., Gillespie, J.W., Emmert–Buck, M.R. & Liotta, L.A. Laser–capture microdissection: opening the microscopic frontier to molecular analysis. Trends Genet.14, 272–276 (1998). ArticleCAS Google Scholar
Adams, M. et al. Complementary DNA sequencing: expressed sequence tags and Human Genome Project. Science252, 1651– 1656 (1991). ArticleCAS Google Scholar
Lennon, G., Auffray, C., Polymeropoulos, M. & Soares, M.B. The I.M.A.G.E. Consortium: an integrated molecular analysis of genomes and their expression. Genomics33, 151– 152 (1996). ArticleCAS Google Scholar
Pietu, G. et al. Novel gene transcripts preferentially expressed in human muscles revealed by quantitative hybridization of a high density cDNA array. Genome Res.6, 492–503 ( 1996). ArticleCAS Google Scholar
Bishop, J.O., Morton, J.G., Rosbash, M. & Richardson, M. Three abundance classes in HeLa cell messenger RNA. Nature250, 199–204 (1974). ArticleCAS Google Scholar
Hastie, N. & Bishop, J. The expression of three abundance classes of messenger RNA in mouse tissues. Cell9, 761–774 (1976). ArticleCAS Google Scholar
Zhang, L. et al. Gene expression profiles in normal and cancer cells. Science276, 1268–1272 ( 1997). ArticleCAS Google Scholar
Lipshutz, R.J., Fodor, S.P.A., Gingeras, T.R. & Lockhart, D.J. High density synthetic oligonucleotide arrays. Nature Genet.21, 20–24 (1999). ArticleCAS Google Scholar
Drmanac, S. et al. Accurate sequencing by hybridization for DNA diagnostics and individual genomics. Nature Biotechnol.16, 54–58 (1998). ArticleCAS Google Scholar
Strezoska, Z. et al. DNA sequencing by hybridization: 100 bases read by a non–gel–based method. Proc. Natl Acad. Sci. USA88, 10089 –10093 (1991). ArticleCAS Google Scholar
Drmanac, R. et al. DNA sequence determination by hybridization: a strategy for efficient large–scale sequencing. Science260 , 1649–1652 (1993) [published erratum appears in Science163, 596 (1994 )]. Article Google Scholar
Duggan, D.J., Bittner, M., Chen, Y., Meltzer, P. & Trent, J. Expression profiling using cDNA microarrays. Nature Genet.21, 10–14 (1999). ArticleCAS Google Scholar
Cheung, V.G. et al. Making and reading microarrays. Nature Genet.21, 15–19 (1999). ArticleCAS Google Scholar
Ermolaeva, O. et al. Data management and analysis for gene expression arrays. Nature Genet.20, 19–23 (1998). ArticleCAS Google Scholar
Bassett, D.E. Jr, Eisen, M.B. & Boguski, M.S. Gene expression informatics—it's all in your mine. Nature Genet.21, 51– 55 (1999). ArticleCAS Google Scholar
Weinstein, J.N. et al. An information–intensive approach to the molecular pharmacology of cancer. Science275, 343– 349 (1997). ArticleCAS Google Scholar
Kahn, P. From genome to proteome: looking at a cell's proteins [news]. Science270, 369–370 ( 1995). ArticleCAS Google Scholar
Shevchenko, A. et al. Linking genome and proteome by mass spectrometry: large–scale identification of yeast proteins from two dimensional gels. Proc. Natl Acad. Sci. USA93, 14440–14445 (1996). ArticleCAS Google Scholar