Mutations in a new gene, encoding a zinc-finger protein, cause tricho-rhino-phalangeal syndrome type I (original) (raw)
- Letter
- Published: January 2000
- Gernot Glöckner2 na1,
- Olaf Schmidt1,
- Diane von Holtum1,
- Beate Albrecht1,
- Gabriele Gillessen-Kaesbach1,
- Raoul Hennekam3,
- Peter Meinecke4,
- Bernhard Zabel5,
- André Rosenthal2,
- Bernhard Horsthemke1 &
- …
- Hermann-Josef Lüdecke1
Nature Genetics volume 24, pages 71–74 (2000)Cite this article
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Abstract
Tricho-rhino-phalangeal syndrome type I (TRPS I, MIM 190350) is a malformation syndrome characterized by craniofacial and skeletal abnormalities and is inherited in an autosomal dominant manner1. TRPS I patients have sparse scalp hair, a bulbous tip of the nose, a long flat philtrum, a thin upper vermilion border and protruding ears. Skeletal abnormalities include cone-shaped epiphyses at the phalanges, hip malformations and short stature. We assigned TRPS1 to human chromosome 8q24. It maps proximal of EXT1, which is affected in a subgroup of patients with multiple cartilaginous exostoses and deleted in all patients with TRPS type II (TRPS II, or Langer-Giedion syndrome, MIM 150230; ref.2–5). We have positionally cloned a gene that spans the chromosomal breakpoint of two patients with TRPS I and is deleted in five patients with TRPS I and an interstitial deletion4,6. Northern-blot analyses revealed transcripts of 7 and 10.5 kb. _TRPS1_has seven exons and an ORF of 3,843 bp. The predicted protein sequence has two potential nuclear localization signals and an unusual combination of different zinc-finger motifs, including IKAROS-like and GATA-binding sequences. We identified six different nonsense mutations in ten unrelated patients. Our findings suggest that haploinsufficiency for this putative transcription factor causes TRPS I.
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References
- Giedion, A., Burdea, M., Fruchter, Z., Meloni, T. & Trosc, V. Autosomal dominant transmission of the tricho-rhino-phalangeal syndrome. Report of 4 unrelated families, review of 60 cases. Helv. Paediatr. Acta 28, 249–259 (1973).
CAS PubMed Google Scholar - Lüdecke, H.-J., et al. Molecular dissection of a contiguous gene syndrome: localization of the genes involved in the Langer-Giedion syndrome. Hum. Mol. Genet. 4, 31–36 ( 1995).
Article Google Scholar - Hou, J., et al. A 4-megabase YAC contig that spans the Langer-Giedion syndrome region on human chromosome 8q24.1: use in refining the location of the trichorhinophalangeal syndrome and multiple exostoses genes (TRPS1 and EXT1). Genomics 29, 87–97 ( 1995).
Article CAS Google Scholar - Lüdecke, H.-J. et al. Genes and chromosomal breakpoints in the Langer-Giedion syndrome region on human chromosome 8. Hum. Genet. (in press).
- Ahn, J., et al. Cloning of the putative tumour suppressor gene for hereditary multiple exostoses (EXT1). Nature Genet. 11, 137–143 (1995).
Article CAS Google Scholar - Nardmann, J., Tranebjærg, L., Horsthemke, B. & Lüdecke, H.-J. The tricho-rhino-phalangeal syndromes: frequency and parental origin of 8q deletions. Hum. Genet. 99, 638– 643 (1997).
Article CAS Google Scholar - Kozak, M. Initiation of translation in prokaryotes and eukaryotes. Gene 234, 187–208 (1999).
Article CAS Google Scholar - Jarrousse, A.S., Petit, F., Kreutzer-Schmid, C., Gaedigk, R. & Schmid, H.P. Possible involvement of proteasomes (prosomes) in AUUUA-mediated mRNA decay. J. Biol. Chem. 274, 5925–2930 (1999).
Article CAS Google Scholar - Dai, K.S. & Liew, C.C. Characterization of a novel gene encoding zinc finger domains identified from expressed sequence tags (ESTs) of a human heart cDNA database. J. Mol. Cell. Cardiol. 30, 2365–2375 (1998).
Article CAS Google Scholar - Brown, K.E. et al. Association of transcriptionally silent genes with IKAROS complexes at centromeric heterochromatin. Cell 91, 845–854 (1997).
Article CAS Google Scholar - Sun, L., Liu, A. & Georgopoulos, K. Zinc finger-mediated protein interactions modulate Ikaros activity, a molecular control of lymphocyte development. EMBO J. 15, 5358–5369 ( 1996).
Article CAS Google Scholar - Boulikas, T. Putative nuclear localization signals (NLS) in protein transcription factors . J. Cell. Biochem. 55, 32– 58 (1994).
Article CAS Google Scholar - Pehlivan, T. et al. GATA4 haploinsufficiency in patients with interstitial deletion of chromosome region 8p23.1 and congenital heart disease. Am. J. Med. Genet. 83, 201–206 (1999).
Article CAS Google Scholar - Kalff-Suske, M. et al. Point mutations throughout the GLI3 gene cause Greig cephalopolysyndactyly syndrome. Hum. Mol. Genet. 8, 1769–1777 (1999).
Article CAS Google Scholar - Fisher, E. & Scambler, P. Human haploinsufficiency—one for sorrow, two for joy. Nature Genet. 7, 5–7 (1994).
Article CAS Google Scholar - Ioannou, P.A. et al. A new bacteriophage P1-derived vector for the propagation of large human DNA fragments. Nature Genet. 6, 84–89 (1994).
Article CAS Google Scholar - Glöckner, G. et al. Large-scale sequencing of two regions in human chromosome 7q22: analysis of 650 kb of genomic sequence aound the EPO and CUTL1 loci reveals 17 genes. Genome Res. 8, 1060–1073 (1998).
Article Google Scholar - Antonarakis, S.E. & the Nomenclature Working Group Recommendations for a nomenclature system for human gene mutations. Hum. Mut. 11, 1–3 (1998).
Article CAS Google Scholar - Yi, Y. et al. The ancestral gene for transcribed, low-copy repeats in the Prader-Willi/Angelman region encodes a large protein implicated in protein trafficking, which is deficient in mice with neuromuscular and spermiogenic abnormalities. Hum. Mol. Genet. 8, 533–542 (1999).
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Acknowledgements
We thank the patients and their clinicians; S. Gro β, M. Klutz and S. Rothe for technical assistance; U. Claussen, B. La Pillo, J. Nardmann, M. Wagner and D. Wells for collaboration during initial stages of this project; D. Lohmann for help with the artwork; and E. Passarge for continuous support. Part of this research was supported by the Deutsche Forschungsgemeinschaft and the Bundesministerium für Bildung, Wissenschaft, Forschung und Technologie.
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Author notes
- Parastoo Momeni and Gernot Glöckner: The first two authors contributed equally to this work.
Authors and Affiliations
- Institut für Humangenetik, Universitätsklinikum , Essen, Germany
Parastoo Momeni, Olaf Schmidt, Diane von Holtum, Beate Albrecht, Gabriele Gillessen-Kaesbach, Bernhard Horsthemke & Hermann-Josef Lüdecke - Abteilung Genomanalyse, Institut für Molekulare Biotechnologie, Jena, Germany
Gernot Glöckner & André Rosenthal - Department of Clinical Genetics and Pediatrics, University of Amsterdam, Amsterdam, The Netherlands
Raoul Hennekam - Abteilung Medizinische Genetik, Altonaer Kinderkrankenhaus , Hamburg, Germany
Peter Meinecke - Kinderklinik und Poliklinik, Klinikum der Johannes Gutenberg-Universität Mainz, Mainz, Germany
Bernhard Zabel
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Momeni, P., Glöckner, G., Schmidt, O. et al. Mutations in a new gene, encoding a zinc-finger protein, cause tricho-rhino-phalangeal syndrome type I.Nat Genet 24, 71–74 (2000). https://doi.org/10.1038/71717
- Received: 20 August 1999
- Accepted: 01 December 1999
- Issue Date: January 2000
- DOI: https://doi.org/10.1038/71717