Anaerobic ammonium oxidation by anammox bacteria in the Black Sea (original) (raw)

References

1. Falkowski, P. G. Evolution of the nitrogen cycle and its influence on the biological sequestration of CO2 in the ocean. Nature 387, 272–275 (1997)
   Article ADS CAS Google Scholar
2. Codispoti, L. A. & Christensen, J. P. Nitrification, denitrification and nitrous oxide cycling in the eastern tropical South Pacific Ocean. Mar. Chem 16, 277–300 (1985)
   Article CAS Google Scholar
3. Strous, M. et al. Missing litotroph identified as new planctomycete. Nature 400, 446–449 (1999)
   Article ADS CAS Google Scholar
4. Sinninghe Damsté, J. S. et al. Linearly concatenated cyclobutane (ladderane) lipids from a dense bacterial membrane. Nature 419, 708–712 (2002)
   Article ADS Google Scholar
5. Bender, M. et al. Organic carbon oxidation and benthic nitrogen and silica dynamics in San Clemente Basin, a continental borderland site. Geochim. Cosmochim. Acta 53, 685–697 (1989)
   Article ADS CAS Google Scholar
6. Codispoti, L. A., Friederich, G. E., Murray, J. W. & Sakamoto, C. M. Chemical variability in the Black Sea: implications of continuous vertical profiles that penetrated the oxic/anoxic interface. Deep-Sea Res. 38, S691–S710 (1991)
   Article ADS Google Scholar
7. Thamdrup, B. & Dalsgaard, T. Production of N2 through anaerobic ammonium oxidation coupled to nitrate reduction in marine sediments. Appl. Environ. Microbiol. 68, 1312–1318 (2002)
   Article CAS Google Scholar
8. Sorokin, Y. I. The Black Sea—Ecology and Oceanography (ed. Martens, K.) 1–875 (Backhuys, Leiden, 2002)
   Google Scholar
9. Froelich, P. N. et al. Early oxidation of organic matter in pelagic sediments of the eastern equatorial Atlantic: Suboxic diagenesis. Geochim. Cosmochim. Acta 43, 1075–1090 (1979)
   Article ADS CAS Google Scholar
10. Richards, F. A. in Chemical Oceanography (eds Ripley, J. P. & Skirrow, G.) 611–645 (Academic, London, 1965)
    Google Scholar
11. Murray, J. W., Codispoti, L. A. & Frederich, G. E. in Aquatic Chemistry (eds Huang, C. P., O'Melia, C. R. & Morgan, J. J.) 157–176 (American Chemical Society, Washington DC, 1995)
    Book Google Scholar
12. Kuenen, J. G. & Jetten, M. S. M. Extraordinary anaerobic ammonium-oxidizing bacteria. ASM News 67, 456–463 (2001)
    Google Scholar
13. Dalsgaard, T. & Thamdrup, B. Factors controlling anaerobic ammonium oxidation with nitrite in marine sediments. Appl. Environ. Microbiol. 68, 3802–3808 (2002)
    Article CAS Google Scholar
14. Mulder, A., van de Graaf, A. A., Robertson, L. A. & Kuenen, J. G. Anaerobic ammonium oxidation discovered in a denitrifying fluidized bed reactor. FEMS Microbiol. Ecol. 16, 177–184 (1995)
    Article CAS Google Scholar
15. Schmid, M. et al. Molecular evidence for genus level diversity of bacteria capable of catalyzing anaerobic ammonium oxidation. Syst. Appl. Microbiol. 23, 93–106 (2000)
    Article CAS Google Scholar
16. Ward, B. B. & Kilpatrick, K. A. in Black Sea Oceanography (eds Izdar, E. & Murray, J. W.) 111–124 (Kluwer Academic, Dordrecht, 1991)
    Book Google Scholar
17. Redfield, A. C., Ketchum, B. H. & Richards, F. A. in The Sea (ed. Hill, M. N.) 26–77 (Interscience, New York, 1963)
    Google Scholar
18. Karl, D. M. & Knauer, G. A. Microbial production and particle flux in the upper 350 m of the Black Sea. Deep-Sea Res. 38, S921–S942 (1991)
    Article ADS Google Scholar
19. Schmid, M., Schmitz-Esser, S., Jetten, M. & Wagner, M. 16S–23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium-oxidizing bacteria: implications for phylogeny and in situ detection. Environ. Microbiol. 3, 450–459 (2001)
    Article CAS Google Scholar
20. Neef, A., Amann, R., Schlesner, H. & Schleifer, K. H. Monitoring a widespread bacterial group: in situ detection of planctomycetes with 16S rRNA-targeted probes. Microbiology 144, 3257–3266 (1998)
    Article CAS Google Scholar
21. Amann, R. I. et al. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl. Environ. Microbiol. 6, 1919–1925 (1990)
    Google Scholar
22. Pernthaler, J., Glöckner, F. O., Schönhuber, W. & Amann, R. in Methods in Microbiology (ed. Paul, J. H.) 207–226 (Academic, London, 2001)
    Google Scholar
23. Berg, P., Risgaard-Petersen, N. & Rysgaard, S. Interpretation of measured concentration profiles in sediment pore water. Limnol. Oceanogr. 43, 1500–1510 (1998)
    Article ADS CAS Google Scholar
24. Oguz, T., Murray, J. W. & Callahan, A. E. Modeling redox cycling across the suboxic-anoxic interface zone in the Black Sea. Deep-Sea Res. I 48, 761–787 (2001)
    Article CAS Google Scholar
25. Lewis, B. & Landing, W. M. The biogeochemistry of manganese and iron in the Black Sea. Deep-Sea Res. 38 (suppl. 2), S773–S803 (1991)
    Article ADS Google Scholar
26. Li, L., Kato, C. & Horikoshi, K. Bacterial diversity in deep-sea sediments from different depths. Biodivers. Conserv. 8, 659–677 (1999)
    Article Google Scholar

Download references