Coral reefs in the Anthropocene (original) (raw)

References

  1. Crutzen, P. J. in Earth System Science in the Anthropocene (eds Ehlers, E. & Krafft, T.) 13–18 (Springer, 2006).
    Google Scholar
  2. Rockström, J. et al. Planetary boundaries: exploring the safe operating space for humanity. Nature 461, 472–475 (2009). This groundbreaking study places human impacts on the environment in a global framework and provides a fresh understanding of social–ecological systems.
    ADS PubMed Google Scholar
  3. Waters, C. N. et al. The Anthropocene is functionally and stratigraphically distinct from the Holocene. Science 351, aad2622 (2016).
    PubMed Google Scholar
  4. Scheffer, M. et al. Creating a safe operating space for iconic ecosystems. Science 347, 1317–1319 (2015).
    ADS CAS PubMed Google Scholar
  5. Hughes, T. P. et al. Climate change, human impacts, and the resilience of coral reefs. Science 301, 929–933 (2003).
    ADS CAS PubMed Google Scholar
  6. Pandolfi, J. M. et al. Global trajectories of the long-term decline of coral reef ecosystems. Science 301, 955–958 (2003).
    ADS CAS PubMed Google Scholar
  7. Jackson, J. B. C., Donovan, M. K., Cramer, K. L. & Lam, V. Status and Trends of Caribbean Coral Reefs: 1970–2012 (Global Coral Reef Monitoring Network, 2014).
    Google Scholar
  8. Heron, S. F., Maynard, J. A., van Hooidonk, R. & Eakin, C. M. Warming trends and bleaching stress of the world's coral reefs 1985–2012. Sci. Rep. 6, 38402 (2016).
    ADS CAS PubMed PubMed Central Google Scholar
  9. Hoegh-Guldberg, O. et al. Coral reefs under rapid climate change and ocean acidification. Science 318, 1737–1742 (2007). A foundational paper that identifies both increases in temperature and ocean acidification as future threats to coral reefs.
    ADS CAS PubMed Google Scholar
  10. Hughes, T. P., Graham, N. A. J., Jackson, J. B. C., Mumby, P. J. & Steneck, R. S. Rising to the challenge of sustaining coral reef resilience. Trends Ecol. Evol. 25, 633–642 (2010).
    PubMed Google Scholar
  11. Pandolfi, J. M., Connolly, S. R., Marshall, D. J. & Cohen, A. L. Projecting coral reef futures under global warming and ocean acidification. Science 333, 418–422 (2011). This study identifies variable responses of reef corals to temperature increases and ocean acidification, which highlights the potential for alternative future trajectories for coral reefs.
    ADS CAS PubMed Google Scholar
  12. Graham, N. A. J., Cinner, J. E., Norström, A. V. & Nyström, M. Coral reefs as novel ecosystems: embracing new futures. Curr. Opin. Env. Sust. 7, 9–14 (2014).
    Google Scholar
  13. Harborne, A. R., Rogers, A., Bozec, Y.-M. & Mumby, P. J. Multiple stressors and the functioning of coral reefs. Annu. Rev. Mar. Sci. 9, 445–468 (2017).
    ADS Google Scholar
  14. NFCCC. Adoption of the Paris Agreement. Report No. FCCC/CP/2015/L.9/Rev.1, http://unfccc.int/resource/docs/2015/cop21/eng/l09r01.pdf (UNFCCC, 2015).
  15. Rogelj, J. et al. Paris Agreement climate proposals need boost to keep warming well below 2 °C. Nature 534, 631–639 (2016). A forward-looking evaluation of the potential for global reductions in the emission of greenhouse gases following the Paris agreement.
    ADS CAS PubMed Google Scholar
  16. Rogelj, J. et al. Differences between carbon budget estimates unravelled. Nature Clim. Change 6, 245–252 (2016).
    ADS Google Scholar
  17. Mathias, J.-D., Anderies, J. M. & Janssen, M. A. On our rapidly shrinking capacity to comply with the planetary boundaries on climate change. Sci. Rep. 7, 42061 (2017).
    ADS CAS PubMed PubMed Central Google Scholar
  18. Collins, M. et al. in Climate Change 2013: The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change (eds Stocker, T. F. et al.) Ch. 12, 1029–1136 (Cambridge Univ. Press, 2013).
    Google Scholar
  19. Hughes, T. P. et al. Global warming and recurrent mass bleaching of corals. Nature 543, 373–377 (2017).
    ADS CAS PubMed Google Scholar
  20. Sutton, R. T., Dong, B. & Gregory, J. M. Land/sea warming ratio in response to climate change: IPCC AR4 model results and comparison with observations. Geophys. Res. Lett. 34, L02701 (2007).
    ADS Google Scholar
  21. Morice, C. P., Kennedy, J. J., Rayner, N. A. & Jones, P. D. Quantifying uncertainties in global and regional temperature change using an ensemble of observational estimates: the HadCRUT4 data set. J. Geophys. Res. 117, D08101 (2012).
    ADS Google Scholar
  22. Hoegh-Guldberg, O. et al. in Climate Change 2014: Impacts, Adaptation, and Vulnerability. Part B: Regional Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change (eds Barros, V. R. et al.) Ch. 30, 1655–1731 (Cambridge Univ. Press, 2014).
  23. Frieler, K. et al. Limiting global warming to 2 °C is unlikely to save most coral reefs. Nature Clim. Change 3, 165–170 (2013).
    ADS Google Scholar
  24. Gattuso, J.-P. & Hansson, L. Ocean Acidification (Oxford Univ. Press, 2011).
    Google Scholar
  25. Rhein, M. et al. in Climate Change 2013: The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change (eds Stocker, T. F. et al.) Ch. 3, 255–315 (Cambridge Univ. Press, 2013).
  26. Orr, J. et al. Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms. Nature 437, 681–686 (2005).
    ADS CAS PubMed Google Scholar
  27. Pandolfi, J. M. Incorporating uncertainty in predicting the future response of coral reefs to climate change. Annu. Rev. Ecol. Evol. Syst. 46, 281–303 (2015).
    Google Scholar
  28. Poloczanska, E. S. et al. Responses of marine organisms to climate change across oceans. Front. Mar. Sci. 3, 62 (2016).
    Google Scholar
  29. Chan, N. C. S. & Connolly, S. R. Sensitivity of coral calcification to ocean acidification: a meta-analysis. Glob. Change Biol. 19, 282–290 (2013).
    ADS Google Scholar
  30. Cooper, T. F., O'Leary, R. A. & Lough, J. M. Growth of Western Australian corals in the Anthropocene. Science 335, 593–596 (2012).
    ADS CAS PubMed Google Scholar
  31. Bellwood, D. R., Hoey, A. S. & Hughes, T. P. Human activity selectively impacts the ecosystem roles of parrotfishes on coral reefs. Proc. R. Soc. B 279, 1621–1629 (2012).
    PubMed Google Scholar
  32. Graham, N. A. J. et al. Managing resilience to reverse phase shifts in coral reefs. Front. Ecol. Environ. 11, 541–548 (2013).
    Google Scholar
  33. Swain, T. D. et al. Coral bleaching response index: a new tool to standardize and compare susceptibility to thermal bleaching. Glob. Change Biol. 22, 2475–2488 (2016).
    ADS Google Scholar
  34. Zhang, K., Dearing, J. A., Tong, S. L. & Hughes, T. P. China's degraded environment enters a new normal. Trends Ecol. Evol. 31, 175–177 (2016).
    PubMed Google Scholar
  35. Barnosky, A. D. et al. Merging paleobiology with conservation biology to guide the future of terrestrial ecosystems. Science 355, eaah4787 (2017).
    PubMed Google Scholar
  36. Vitousek, P. M., Mooney, H. A., Lubchenco, J. & Melillo, J. M. Human domination of Earth's ecosystems. Science 277, 494–499 (1997).
    CAS Google Scholar
  37. Bellwood, D. R., Hughes, T. P., Folke, C. & Nyström, M. Confronting the coral reef crisis. Nature 429, 827–833 (2004).
    ADS CAS PubMed Google Scholar
  38. Hicks, C. C., Crowder, L. B., Graham, N. A. J., Kittinger, J. N. & Le Cornu, E. Social drivers forewarn of marine regime shifts. Front. Ecol. Environ. 14, 252–260 (2016).
    Google Scholar
  39. Cinner, J. E. & Kittinger, J. N. in Ecology of Fishes on Coral Reefs (ed. Mora, C.) 215–220 (Cambridge Univ. Press, 2015).
    Google Scholar
  40. Levin, S. et al. Social–ecological systems as complex adaptive systems: modeling and policy implications. Environ. Dev. Econ. 18, 111–132 (2013).
    Google Scholar
  41. Fischer, J. et al. Advancing sustainability through mainstreaming a social–ecological systems perspective. Curr. Opin. Env. Sust. 14, 144–149 (2015).
    Google Scholar
  42. Cumming, G. S., Morrison, T. H. & Hughes, T. P. New directions for understanding the spatial resilience of social–ecological systems. Ecosystems http://dx.doi.org/10.1007/s10021-016-0089-5 (2016).
  43. Satake, A., Janssen, M. A., Levin, S. A. & Iwasa, Y. Synchronized deforestation induced by social learning under uncertainty of forest-use value. Ecol. Econ. 63, 452–462 (2007).
    Google Scholar
  44. Martin, R. & Schlüter, M. Combining system dynamics and agent-based modeling to analyze social–ecological interactions — an example from modeling restoration of a shallow lake. Front. Environ. Sci. 3, 66 (2015).
    Google Scholar
  45. Laborde, S. et al. Social–ecological feedbacks lead to unsustainable lock-in in an inland fishery. Glob. Environ. Change 41, 13–25 (2016).
    Google Scholar
  46. Figueiredo, J. & Pereira, H. M. Regime shifts in a socio–ecological model of farmland abandonment. Landscape Ecol. 26, 737–749 (2011).
    Google Scholar
  47. Ban, S. S., Graham, N. A. J. & Connolly, S. R. Evidence for multiple stressor interactions and effects on coral reefs. Glob. Change Biol. 20, 681–697 (2014).
    ADS Google Scholar
  48. Cinner, J. E. et al. Bright spots among the world's coral reefs. Nature 535, 416–419 (2016).
    ADS CAS PubMed Google Scholar
  49. Graham, N. A. J., Jennings, S., MacNeil, M. A., Mouillot, D. & Wilson, S. K. Predicting climate-driven regime shifts versus rebound potential in coral reefs. Nature 518, 94–97 (2015).
    ADS CAS PubMed Google Scholar
  50. Burke, L., Reytar, K., Spalding, M. & Perry, A. Reefs at Risk Revisited (World Resources Institute, 2011).
    Google Scholar
  51. Halpern, B. S. et al. Spatial and temporal changes in cumulative human impacts on the world's ocean. Nature Commun. 6, 7615 (2015).
    ADS CAS Google Scholar
  52. Hughes, T. P., Linares, C., Dakos, V., van de Leemput, I. A. & van Nes, E. H. Living dangerously on borrowed time during slow, unrecognized regime shifts. Trends Ecol. Evol. 28, 149–155 (2013).
    PubMed Google Scholar
  53. Owen-Smith, N. Spatial ecology of large herbivore populations. Ecography 37, 416–430 (2014).
    Google Scholar
  54. Plowright, R. K., Sokolow, S. H., Gorman, M. E., Daszak, P. & Foley, J. E. Causal inference in disease ecology: investigating ecological drivers of disease emergence. Front. Ecol. Environ. 6, 420–429 (2008).
    Google Scholar
  55. Scheffer, M., Carpenter, S., Foley, J. A., Folke, C. & Walker, B. Catastrophic shifts in ecosystems. Nature 413, 591–596 (2001).
    ADS CAS PubMed Google Scholar
  56. van de Leemput, I. A., Hughes, T. P., van Nes, E. H. & Scheffer, M. Multiple feedbacks and the prevalence of alternate stable states. Coral Reefs 35, 857–865 (2016).
    ADS Google Scholar
  57. Nyström, M. et al. Confronting feedbacks of degraded marine ecosystems. Ecosystems 15, 695–710 (2012).
    Google Scholar
  58. Knowlton, N. & Jackson, J. B. C. Shifting baselines, local impacts, and global change on coral reefs. PLoS Biol. 6, 215–220 (2008).
    CAS Google Scholar
  59. Johnston, M. W. & Purkis, S. J. Spatial analysis of the invasion of lionfish in the western Atlantic and Caribbean. Mar. Pollut. Bull. 62, 1218–1226 (2011).
    CAS PubMed Google Scholar
  60. Cardinale, B. J. et al. Biodiversity loss and its impact on humanity. Nature 486, 59–67 (2012). This Review provides a scientific consensus on biodiversity, ecosystem functioning and their potential impacts on society.
    ADS CAS PubMed Google Scholar
  61. Madin, J. S. et al. A trait-based approach to advance coral reef science. Trends Ecol. Evol. 31, 419–428 (2016).
    PubMed Google Scholar
  62. Devictor, V. et al. Defining and measuring ecological specialization. J. Appl. Ecol. 47, 15–25 (2010).
    Google Scholar
  63. Mouillot, D. et al. Functional over-redundancy and high functional vulnerability in global fish faunas on tropical reefs. Proc. Natl Acad. Sci. USA 111, 13757–13762 (2014).
    ADS CAS PubMed PubMed Central Google Scholar
  64. Mouillot, D. et al. Rare species support vulnerable functions in high-diversity ecosystems. PLoS Biol. 11, e1001569 (2013). This paper highlights the potential vulnerability of high-diversity systems owing to the loss of rare species with functional importance.
    CAS PubMed PubMed Central Google Scholar
  65. Naeem, S., Duffy, J. E. & Zavaleta, E. The functions of biological diversity in an age of extinction. Science 336, 1401–1406 (2012).
    ADS CAS PubMed Google Scholar
  66. Nyborg, K. et al. Social norms as solutions. Science 354, 42–43 (2016).
    ADS CAS PubMed Google Scholar
  67. Gurney, G. G., Pressey, R. L., Cinner, J. E., Pollnac, R. & Campbell, S. J. Integrated conservation and development: evaluating a community-based marine protected area project for equality of socioeconomic impacts. Phil. Trans. R. Soc. B 370, 20140277 (2015).
    PubMed PubMed Central Google Scholar
  68. Christie, P. et al. Improving human and environmental conditions through the Coral Triangle Initiative: progress and challenges. Curr. Opin. Env. Sust. 19, 169–181 (2016).
    Google Scholar
  69. Johnson, A. E. Reducing bycatch in coral reef trap fisheries: escape gaps as a step towards sustainability. Mar. Ecol. Prog. Ser. 415, 201–209 (2010).
    ADS Google Scholar
  70. Barrett, C. B. & Constas, M. A. Toward a theory of resilience for international development applications. Proc. Natl Acad. Sci. USA 111, 14625–14630 (2014).
    ADS CAS PubMed PubMed Central Google Scholar
  71. Arias, A. Understanding and managing compliance in the nature conservation context. J. Environ. Manage. 153, 134–143 (2015).
    PubMed Google Scholar
  72. Ostrom, E. Polycentric systems for coping with collective action and global environmental change. Glob. Environ. Change 20, 550–557 (2010).
    Google Scholar
  73. Brown, K. Resilience, Development and Global Change (Routledge, 2016).
    Google Scholar
  74. Keohane, R. O. The global politics of climate change: challenge for political science. Political Sci. Politics 48, 19–26 (2015).
    Google Scholar
  75. Ruckelshaus, M., Klinger, T., Knowlton, N. & DeMaster, D. P. Marine ecosystem-based management in practice: scientific and governance challenges. Bioscience 58, 53–63 (2008).
    Google Scholar
  76. McCook, L. J. et al. Adaptive management of the Great Barrier Reef: a globally significant demonstration of the benefits of networks of marine reserves. Proc. Natl Acad. Sci. USA 107, 18278–18285 (2010).
    ADS CAS PubMed PubMed Central Google Scholar
  77. Lubchenco, J., Cerny-Chipman, E. B., Reimer, J. N. & Levin, S. A. The right incentives enable ocean sustainability successes and provide hope for the future. Proc. Natl Acad. Sci. USA 113, 14507–14514 (2016).
    ADS CAS PubMed PubMed Central Google Scholar
  78. Hughes, T. P., Bellwood, D. R., Folke, C., Steneck, R. S. & Wilson, J. New paradigms for supporting the resilience of marine ecosystems. Trends Ecol. Evol. 20, 380–386 (2005).
    PubMed Google Scholar
  79. Lam, V. Y. Y., Doropoulos, C. & Mumby, P. J. The influence of resilience-based management on coral reef monitoring: a systematic review. PLoS ONE 12, e0172064 (2017).
    PubMed PubMed Central Google Scholar
  80. Hobbs, R. J., Hallett, L. M., Ehrlich, P. R. & Mooney, H. A. Intervention ecology: applying ecological science in the twenty-first century. Bioscience 61, 442–450 (2011).
    Google Scholar
  81. van Oppen, M. J. H., Oliver, J. K., Putnam, H. M. & Gates, R. D. Building coral reef resilience through assisted evolution. Proc. Natl Acad. Sci. USA 112, 2307–2313 (2015).
    ADS CAS PubMed PubMed Central Google Scholar
  82. Hoegh-Guldberg, O. et al. Assisted colonization and rapid climate change. Science 321, 345–346 (2008).
    CAS PubMed Google Scholar
  83. Bayraktarov, E. et al. The cost and feasibility of marine coastal restoration. Ecol. Appl. 26, 1055–1074 (2016).
    PubMed Google Scholar
  84. US National Marine Fisheries Service. Recovery Plan for Elkhorn Coral (Acropora palmata) and Staghorn Coral (A. cervicornis) http://www.nmfs.noaa.gov/pr/recovery/plans/final_acropora_recovery_plan.pdf (2015).
  85. Walker, B. et al. Looming global-scale failures and missing institutions. Science 325, 1345–1346 (2009).
    CAS PubMed Google Scholar
  86. Keohane, R. O. & Victor, D. G. The regime complex for climate change. Perspect. Polit. 9, 7–23 (2011).
    Google Scholar
  87. Levin, K., Cashore, B., Bernstein, S. & Auld, G. Overcoming the tragedy of super wicked problems: constraining our future selves to ameliorate global climate change. Policy Sci. 45, 123–152 (2012).
    Google Scholar
  88. Bai, X. et al. Plausible and desirable futures in the Anthropocene: a new research agenda. Glob. Environ. Change 39, 351–362 (2016).
    Google Scholar
  89. Biermann, F. et al. Navigating the Anthropocene: improving earth system governance. Science 335, 1306–1307 (2012). A key paper that emphasizes the need for governance approaches to changes that occur in response to human impacts on the environment.
    ADS CAS PubMed Google Scholar
  90. Cole, D. H. Advantages of a polycentric approach to climate change policy. Nature Clim. Change 5, 114–118 (2015).
    ADS Google Scholar
  91. Young, H. P. The evolution of social norms. Annu. Rev. Econom. 7, 359–387 (2015).
    Google Scholar
  92. Kahneman, D. Thinking, Fast and Slow (Farrar, Straus and Giroux, 2011).
    Google Scholar
  93. Oliver, T. H. et al. Biodiversity and resilience of ecosystem functions. Trends Ecol. Evol. 30, 673–684 (2015).
    PubMed Google Scholar
  94. Ferraro, P. J. & Pressey, R. L. Measuring the difference made by conservation initiatives: protected areas and their environmental and social impacts. Phil. Trans. R. Soc. B 370, 20140270 (2015).
    PubMed PubMed Central Google Scholar
  95. Rogelj, J., Meinshausen, M. & Knutti, R. Global warming under old and new scenarios using IPCC climate sensitivity range estimates. Nature Clim. Change 2, 248–253 (2012).
    ADS Google Scholar
  96. Hartmann, D. et al. in Climate Change 2013: The Physical Science Basis. Contribution of Working Group I to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change (eds Stocker, T. F. et al.) Ch. 2, 159–254 (Cambridge Univ. Press, 2013).
  97. Rayner, N. A. et al. Global analyses of sea surface temperature, sea ice, and night marine air temperature since the late nineteenth century. J. Geophys. Res. 108, 4407 (2003). A foundational study that establishes the main physical characteristics of global climate change.
    Google Scholar
  98. Lough, J. M. Small change, big difference: sea surface temperature distributions for tropical coral reef ecosystems, 1950–2011. J. Geophys. Res. 117, C09018 (2012).
    ADS Google Scholar
  99. Palumbi, S. R., Barshis, D. J., Traylor-Knowles, N. & Bay, R. A. Mechanisms of reef coral resistance to future climate change. Science 344, 895–898 (2014).
    ADS CAS PubMed Google Scholar
  100. Kenkel, C. D. & Matz, M. V. Gene expression plasticity as a mechanism of coral adaptation to a variable environment. Nature Ecol. Evol. 1, 0014 (2016).
    Google Scholar
  101. Baker, A. C. Reef corals bleach to survive change. Nature 411, 765–766 (2001).
    ADS CAS PubMed Google Scholar
  102. Dixon, G. B. et al. Genomic determinants of coral heat tolerance across latitudes. Science 348, 1460–1462 (2015).
    ADS CAS PubMed Google Scholar
  103. Howells, E. J., Berkelmans, R., van Oppen, M. J. H., Willis, B. L. & Bay, L. K. Historical thermal regimes define limits to coral acclimatization. Ecology 94, 1078–1088 (2013).
    PubMed Google Scholar
  104. Bay, R. A. & Palumbi, S. R. Multilocus adaptation associated with heat resistance in reef-building corals. Curr. Biol. 24, 2952–2956 (2014).
    CAS PubMed Google Scholar
  105. Silverstein, R. N., Cunning, R. & Baker, A. C. Change in algal symbiont communities after bleaching, not prior heat exposure, increases heat tolerance of reef corals. Glob. Change Biol. 21, 236–249 (2015).
    ADS Google Scholar
  106. Munday, P. L., Donelson, J. M. & Domingos, J. A. Potential for adaptation to climate change in a coral reef fish. Glob. Change Biol. 23, 307–317 (2017).
    ADS Google Scholar
  107. Putnam, H. M., Davidson, J. M. & Gates, R. D. Ocean acidification influences host DNA methylation and phenotypic plasticity in environmentally susceptible corals. Evol. Appl. 9, 1165–1178 (2016).
    CAS PubMed PubMed Central Google Scholar
  108. Ainsworth, T. D. et al. Climate change disables coral bleaching protection on the Great Barrier Reef. Science 352, 338–342 (2016).
    ADS CAS PubMed Google Scholar

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