- Chourey, P.S., Jain, M., Li, Q.-B. & Carlson, S.J. Genetic control of cell wall invertases in developing endosperm of maize. Planta 223, 159–167 (2006).
Article CAS PubMed Google Scholar
- Wang, E. et al. Control of rice grain-filling and yield by a gene with a potential signature of domestication. Nat. Genet. 40, 1370–1374 (2008).
Article CAS PubMed Google Scholar
- Lalonde, S., Wipf, D. & Frommer, W.B. Transport mechanisms for organic forms of carbon and nitrogen between source and sink. Annu. Rev. Plant Biol. 55, 341–372 (2004).
Article CAS PubMed Google Scholar
- Bihmidine, S., Hunter, C.T.I., Johns, C.E., Koch, K.E. & Braun, D.M. Regulation of assimilate import into sink organs: update on molecular drivers of sink strength. Front. Plant Sci. 4, 177 (2013).
Article PubMed PubMed Central Google Scholar
- Glémin, S. & Battaillon, T. A comparative view of the evolution of grasses under domestication. New Phytol. 183, 273–290 (2009).
Article CAS PubMed Google Scholar
- Peng, J. et al. 'Green revolution' genes encode mutant gibberellin response modulators. Nature 400, 256–261 (1999).
Article CAS PubMed Google Scholar
- Sekhon, R.S. et al. Genome-wide atlas of transcription during maize development. Plant J. 66, 553–563 (2011).
Article CAS PubMed Google Scholar
- Li, G. et al. Temporal patterns of gene expression in developing maize endosperm identified through transcriptome sequencing. Proc. Natl. Acad. Sci. USA 111, 7582–7587 (2014).
Article CAS PubMed PubMed Central Google Scholar
- Davidson, R.M., Hansey, C.N. & Gowda, M. Utility of RNA sequencing for analysis of maize reproductive transcriptomes. Plant Genome 4, 191–203 (2011).
Article CAS Google Scholar
- Hufford, M.B. et al. Comparative population genomics of maize domestication and improvement. Nat. Genet. 44, 808–811 (2012).
Article CAS PubMed PubMed Central Google Scholar
- Chen, L.-Q. et al. Sugar transporters for intercellular exchange and nutrition of pathogens. Nature 468, 527–532 (2010).
Article CAS PubMed PubMed Central Google Scholar
- Chen, L.-Q. et al. Sucrose efflux mediated by SWEET proteins as a key step for phloem transport. Science 335, 207–211 (2012).
Article CAS PubMed Google Scholar
- Lin, I.W. et al. Nectar secretion requires sucrose phosphate synthases and the sugar transporter SWEET9. Nature 508, 546–549 (2014).
Article CAS PubMed Google Scholar
- Lemmon, Z.H. et al. The role of cis regulatory evolution in maize domestication. PLoS Genet. 10, e1004745 (2014).
Article CAS PubMed PubMed Central Google Scholar
- Chourey, P.S., Li, Q.-B. & Cevallos-Cevallos, J. Pleiotropy and its dissection through a metabolic gene Miniature1 (Mn1) that encodes a cell wall invertase in developing seeds of maize. Plant Sci. 184, 45–53 (2012).
Article CAS PubMed Google Scholar
- Flint-Garcia, S.A., Bodnar, A. & Scott, M.P. Wide variability in seed characteristics, kernel quality, and zein profiles among diverse maize inbreds, landraces, and teosinte. Theor. Appl. Genet. 119, 1129–1142 (2009).
Article PubMed Google Scholar
- Sosso, D., Javelle, M. & Rogowsky, P.M. in Advances in Maize Vol. 3 (eds. Prioul, J.L., Thevenot, C. & Molnar, T.) 163–188 (Society for Experimental Biology, 2011).
- Lucas, W.J. et al. The plant vascular system: evolution, development and functions. J. Integr. Plant Biol. 55, 294–388 (2013).
Article CAS PubMed Google Scholar
- Chen, L.-Q. et al. Embryo nutrition by a cascade of sequentially expressed sucrose transporters in the seed coat. Plant Cell 27, 607–619 (2015).
Article CAS PubMed PubMed Central Google Scholar
- Shannon, J.C. Movement of 14C-labeled assimilates into kernels of Zea mays L.: I. pattern and rate of sugar movement. Plant Physiol. 49, 198–202 (1972).
Article CAS PubMed PubMed Central Google Scholar
- Schmalstig, J.G. & Hitz, W.D. Transport and metabolism of a sucrose analog (1′-fluorosucrose) into Zea mays L. endosperm without invertase hydrolysis. Plant Physiol. 85, 902–905 (1987).
Article CAS PubMed PubMed Central Google Scholar
- Cheng, W.H., Taliercio, E.W. & Chourey, P.S. The Miniature1 seed locus of maize encodes a cell wall invertase required for normal development of endosperm and maternal cells in the pedicel. Plant Cell 8, 971–983 (1996).
Article CAS PubMed PubMed Central Google Scholar
- Koch, K. Sucrose metabolism: regulatory mechanisms and pivotal roles in sugar sensing and plant development. Curr. Opin. Plant Biol. 7, 235–246 (2004).
Article CAS PubMed Google Scholar
- Xiong, Y., Li, Q.-B., Kang, B.-H. & Chourey, P.S. Discovery of genes expressed in basal endosperm transfer cells in maize using 454 transcriptome sequencing. Plant Mol. Biol. Rep. 29, 835–847 (2011).
Article CAS Google Scholar
- Klemens, P.A.W. et al. Overexpression of the vacuolar sugar carrier AtSWEET16 modifies germination, growth, and stress tolerance in Arabidopsis. Plant Physiol. 163, 1338–1352 (2013).
Article CAS PubMed PubMed Central Google Scholar
- Guo, W.J. et al. SWEET17, a facilitative transporter, mediates fructose transport across the tonoplast of Arabidopsis roots and leaves. Plant Physiol. 164, 777–789 (2014).
Article CAS PubMed Google Scholar
- Tao, Y. et al. Structure of a eukaryotic SWEET transporter in a homotrimeric complex. Nature doi:10.1038/nature15391 (19 October 2015).
- Chen, H.-Y. et al. The Arabidopsis vacuolar sugar transporter SWEET2 limits carbon sequestration from roots and restricts Pythium infection. Plant J. 83, 1046–1058 (2015).
Article CAS PubMed Google Scholar
- Wieczorke, R. et al. Concurrent knock-out of at least 20 transporter genes is required to block uptake of hexoses in Saccharomyces cerevisiae. FEBS Lett. 464, 123–128 (1999).
Article CAS PubMed Google Scholar
- Kellett, G.L., Brot-Laroche, E., Mace, O.J. & Leturque, A. Sugar absorption in the intestine: the role of GLUT2. Annu. Rev. Nutr. 28, 35–54 (2008).
Article CAS PubMed Google Scholar
- Zheng, Y. & Wang, Z. Current opinions on endosperm transfer cells in maize. Plant Cell Rep. 29, 935–942 (2010).
Article CAS PubMed Google Scholar
- Thompson, R.D., Hueros, G., Becker, H.A. & Maitz, M. Development and functions of seed transfer cells. Plant Sci. 160, 775–783 (2001).
Article CAS PubMed Google Scholar
- Wardini, T., Talbot, M.J., Offler, C.E. & Patrick, J.W. Role of sugars in regulating transfer cell development in cotyledons of developing Vicia faba seeds. Protoplasma 230, 75–88 (2007).
Article CAS PubMed Google Scholar
- Gómez, E. et al. The maize transcription factor Myb-related protein-1 is a key regulator of the differentiation of transfer cells. Plant Cell 21, 2022–2035 (2009).
Article CAS PubMed PubMed Central Google Scholar
- Barrero, C. et al. The promoter of ZmMRP-1, a maize transfer cell–specific transcriptional activator, is induced at solute exchange surfaces and responds to transport demands. Planta 229, 235–247 (2009).
Article CAS PubMed Google Scholar
- Borisjuk, L. et al. Seed development and differentiation: a role for metabolic regulation. Plant Biol. 6, 375–386 (2004).
Article CAS PubMed Google Scholar
- Eom, J.S. et al. SWEETs, transporters for intracellular and intercellular sugar translocation. Curr. Opin. Plant Biol. 25, 53–62 (2015).
Article CAS PubMed Google Scholar
- Huang, X. et al. A map of rice genome variation reveals the origin of cultivated rice. Nature 490, 497–501 (2012).
Article CAS PubMed PubMed Central Google Scholar
- McCarty, D.R. et al. Steady-state transposon mutagenesis in inbred maize. Plant J. 44, 52–61 (2005).
Article CAS PubMed Google Scholar
- McCarty, D.R. et al. Mu-seq: sequence-based mapping and identification of transposon induced mutations. PLoS ONE 8, e77172 (2013).
Article CAS PubMed PubMed Central Google Scholar
- Hunter, C.T. et al. Phenotype to genotype using forward-genetic Mu-seq for identification and functional classification of maize mutants. Front. Plant Sci. 4, 545 (2014).
Article PubMed PubMed Central Google Scholar
- Hufford, M.B. et al. Comparative population genomics of maize domestication and improvement. Nat. Genet. 44, 808–811 (2012).
Article CAS PubMed PubMed Central Google Scholar
- Thornton, K. et al. Libsequence: a C. class library for evolutionary genetic analysis. Bioinformatics 19, 2325–2327 (2003).
Article CAS PubMed Google Scholar
- Piperno, D.R. et al. Starch grain and phytolith evidence for early ninth millennium B.P. maize from the Central Balsas River Valley, Mexico. Proc. Natl. Acad. Sci. USA 106, 5019–5024 (2009).
Article PubMed PubMed Central Google Scholar
- Wright, S.I. et al. The effects of artificial selection on the maize genome. Science 308, 1310–1314 (2005).
Article CAS PubMed Google Scholar
- Hudson, R.R. et al. Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 18, 337–338 (2002).
Article CAS PubMed Google Scholar
- Hudson, R.R. et al. A statistical test for detecting geographic subdivision. Mol. Biol. Evol. 9, 138–151 (1992).
CAS PubMed Google Scholar
- Danecek, P. et al. The variant call format and VCFtools. Bioinformatics 27, 2156–2158 (2011).
Article CAS PubMed PubMed Central Google Scholar
- Jackson, D.P. in Molecular Plant Pathology: A Practical Approach (eds. Bowles, D.J., Gurr, S.J. & McPhereson, M.) 163–174 (Oxford University Press, 1991).
- Wang, C. et al. Isolation and characterization of expressed sequence tags (ESTs) from cambium tissue of birch (Betula platyphylla Suk). Plant Mol. Biol. Rep. 28, 438–449 (2010).
Article CAS Google Scholar
- De Oliveira, R.R. et al. In silico and quantitative analyses of MADS-Box genes in Coffea arabica. Plant Mol. Biol. Rep. 28, 460–472 (2010).
Article CAS Google Scholar
- Hou, B.H. et al. Optical sensors for monitoring dynamic changes of metabolite levels in mammalian cells. Nat. Protoc. 6, 1818–1833 (2011).
Article CAS PubMed Google Scholar
- Zhou, J. et al. Gene targeting by the TAL effector PthXo2 reveals cryptic resistance gene for bacterial blight of rice. Plant J. 82, 632–643 (2015).
Article CAS PubMed Google Scholar
- Cheng, W.H. & Chourey, P.S. Genetic evidence that invertase-mediated release of hexoses is critical for appropriate carbon partitioning and normal seed development in maize. Theor. Appl. Genet. 98, 485–495 (1999).
Article CAS Google Scholar
- Li, T. et al. TALEN utilization in rice genome modifications. Methods 69, 9–16 (2014).
Article CAS PubMed Google Scholar
- Li, T. et al. High efficiency TALEN-based gene editing produces disease resistant rice. Nat. Biotechnol. 30, 390–392 (2012).
Article CAS PubMed Google Scholar
- Bleckmann, A. et al. Stem cell signaling in Arabidopsis requires CRN to localize CLV2 to the plasma membrane. Plant Physiol. 152, 166–176 (2010).
Article CAS PubMed PubMed Central Google Scholar
- Dupreet, P. et al. Expression of photosynthesis gene-promoter fusions in leaf epidermal cells of transgenic tobacco plants. Plant J. 1, 115–120 (1991).
Article Google Scholar
- Zhang, Y. et al. A highly efficient rice green tissue protoplast system for transient gene expression and studying light/chloroplast-related processes. Plant Methods 7, 30 (2011).
Article CAS PubMed PubMed Central Google Scholar
- Jefferson, R.A., Kavanagh, T.A. & Bevan, M.W. GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6, 3901–3907 (1987).
Article CAS PubMed PubMed Central Google Scholar
- Scheet, P. & Stephens, M. A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase. Am. J. Hum. Genet. 78, 629–644 (2006).
Article CAS PubMed PubMed Central Google Scholar
- Paradis, E. pegas: an R package for population genetics with an integrated-modular approach. Bioinformatics 26, 419–420 (2010).
Article CAS PubMed Google Scholar