Evolutionary and biomedical implications of a Schistosoma japonicum complementary DNA resource (original) (raw)

• Ross, A.G. et al. Schistosomiasis in the People's Republic of China: prospects and challenges for the 21st century. Clin. Microbiol. Rev. 14, 270–295 (2001).
  Article CAS Google Scholar
• Holland, P.W. The future of evolutionary developmental biology. Nature 402, C41–C44 (1999).
  Article CAS Google Scholar
• Dacks, J.B. & Doolittle, W.F. Reconstructing/deconstructing the earliest eukaryotes: how comparative genomics can help. Cell 107, 419–425 (2001).
  Article CAS Google Scholar
• Morand, S. & Muller-Graf, C.D. Muscles or testes? Comparative evidence for sexual competition among dioecious blood parasites (Schistosomatidae) of vertebrates. Parasitology 120, 45–56 (2000).
  Article Google Scholar
• Boag, P.R., Newton, S.E. & Gasser, R.B. Molecular aspects of sexual development and reproduction in nematodes and schistosomes. Adv. Parasitol. 50, 153–198 (2001).
  Article CAS Google Scholar
• Ross, A.G. et al. Schistosomiasis. N. Engl. J. Med. 346, 1212–1220 (2002).
  Article Google Scholar
• Salzet, M., Capron, A. & Stefano, G.B. Molecular crosstalk in host-parasite relationships: schistosome- and leech-host interactions. Parasitol. Today 16, 536–540 (2000).
  Article CAS Google Scholar
• Davies, S.J. et al. Modulation of blood fluke development in the liver by hepatic CD4+ lymphocytes. Science 294, 1358–1361 (2001).
  Article CAS Google Scholar
• Johnston, D.A. et al. Genomics and the biology of parasites. Bioessays 21, 131–147 (1999).
  Article CAS Google Scholar
• Rubin, G.M. et al. A Drosophila complementary DNA resource. Science 287, 2222–2224 (2000).
  Article CAS Google Scholar
• Thornton, J.W. & DeSalle, R. Gene family evolution and homology: genomics meets phylogenetics. Annu. Rev. Genomics Hum. Genet. 1, 41–73 (2000).
  Article CAS Google Scholar
• Venter, J.C. et al. The sequence of the human genome. Science 291, 1304–1351 (2001).
  Article CAS Google Scholar
• Lander, E.S. et al. Initial sequencing and analysis of the human genome. Nature 409, 860–921 (2001).
  Article CAS Google Scholar
• Ashburner, M. et al. Gene Ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat. Genet. 25, 25–29 (2000).
  Article CAS Google Scholar
• The Gene Ontology Consortium. Creating the gene ontology resource: design and implementation. Genome Res. 11, 1425–1433 (2001).
• Brindley, P.J. et al. Proteolytic degradation of host hemoglobin by schistosomes. Mol. Biochem. Parasitol. 89, 1–9 (1997).
  Article CAS Google Scholar
• Halton, D.W. Nutritional adaptations to parasitism within the platyhelminthes. Int. J. Parasitol. 27, 693–704 (1997).
  Article CAS Google Scholar
• Camacho, M. & Agnew, A. Glucose uptake rates by Schistosoma mansoni, S. haematobium, and S. bovis adults using a flow in vitro culture system. J. Parasitol. 81, 637–640 (1995).
  Article CAS Google Scholar
• Skelly, P.J., Kim, J.W., Cunningham, J. & Shoemaker, C.B. Cloning, characterization, and functional expression of cDNAs encoding glucose transporter proteins from the human parasite Schistosoma mansoni. J. Biol. Chem. 269, 4247–4253 (1994).
  CAS PubMed Google Scholar
• Skelly, P.J. & Shoemaker, C.B. Rapid appearance and asymmetric distribution of glucose transporter SGTP4 at the apical surface of intramammalian-stage Schistosoma mansoni. Proc. Natl. Acad. Sci. USA 93, 3642–3646 (1996).
  Article CAS Google Scholar
• Bueding, E. & Fisher, J. Metabolic requirements of schistosomes. J. Parasitol. 68, 208–212 (1982).
  Article CAS Google Scholar
• Hoffmann, K.F., Johnston, D.A. & Dunne, D.W. Identification of Schistosoma mansoni gender-associated gene transcripts by cDNA microarray profiling. Genome Biol. 3, RESEARCH0041 (2002).
  PubMed PubMed Central Google Scholar
• Gorman, M., Kuroda, M.I. & Baker, B.S. Regulation of the sex-specific binding of the maleless dosage compensation protein to the male X chromosome in Drosophila. Cell 72, 39–49 (1993).
  Article CAS Google Scholar
• Pultz, M.A. & Baker, B.S. The dual role of hermaphrodite in the Drosophila sex determination regulatory hierarchy. Development 121, 99–111 (1995).
  CAS PubMed Google Scholar
• Sokol, S.B. & Kuwabara, P.E. Proteolysis in Caenorhabditis elegans sex determination: cleavage of TRA-2A by TRA-3. Genes Dev. 14, 901–906 (2000).
  CAS PubMed PubMed Central Google Scholar
• Kuwabara, P.E., Okkema, P.G. & Kimble, J. Germ-line regulation of the Caenorhabditis elegans sex-determining gene tra-2. Dev. Biol. 204, 251–262 (1998).
  Article CAS Google Scholar
• Lum, D.H., Kuwabara, P.E., Zarkower, D. & Spence, A.M. Direct protein-protein interaction between the intracellular domain of TRA-2 and the transcription factor TRA-1A modulates feminizing activity in C. elegans. Genes Dev. 14, 3153–3165 (2000).
  CAS PubMed PubMed Central Google Scholar
• Bostic, J.R. & Strand, M. Molecular cloning of a Schistosoma mansoni protein expressed in the gynecophoral canal of male worms. Mol. Biochem. Parasitol. 79, 79–89 (1996).
  Article CAS Google Scholar
• Ravindran, B. Are inflammation and immunological hyperactivity needed for filarial parasite development? Trends Parasitol. 17, 70–73 (2001).
  Article CAS Google Scholar
• Amiri, P. et al. Tumour necrosis factor alpha restores granulomas and induces parasite egg-laying in schistosome-infected SCID mice. Nature 356, 604–607 (1992).
  Article CAS Google Scholar
• Pearce, E.J. & MacDonald, A.S. The immunobiology of schistosomiasis. Nat. Rev. Immunol. 2, 499–511 (2002).
  Article CAS Google Scholar
• Gardner, M.J. et al. Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419, 498–511 (2002).
  Article CAS Google Scholar
• Santos, T.M. et al. Analysis of the gene expression profile of Schistosoma mansoni cercariae using the expressed sequence tag approach. Mol. Biochem. Parasitol. 103, 79–97 (1999).
  Article CAS Google Scholar
• Li, L. et al. Gene discovery in the apicomplexa as revealed by EST sequencing and assembly of a comparative gene database. Genome Res. 13, 443–454 (2003).
  Article Google Scholar
• Blair, J.E., Ikeo, K., Gojobori, T. & Hedges, S.B. The evolutionary position of nematodes. BMC Evol. Biol. 2, 7 (2002).
  Article Google Scholar
• Adoutte, A. et al. The new animal phylogeny: reliability and implications. Proc. Natl. Acad. Sci. USA 97, 4453–4456 (2000).
  Article CAS Google Scholar
• Le, T.H., Blair, D. & McManus, D.P. Mitochondrial genomes of parasitic flatworms. Trends Parasitol. 18, 206–213 (2002).
  Article CAS Google Scholar
• Rubin, G.M. et al. Comparative genomics of the eukaryotes. Science 287, 2204–2215 (2000).
  Article CAS Google Scholar
• Li, W.H., Gu, Z., Wang, H. & Nekrutenko, A. Evolutionary analyses of the human genome. Nature 409, 847–849 (2001).
  Article CAS Google Scholar
• Lipman, D.J., Souvorov, A., Koonin, E.V., Panchenko, A.R. & Tatusova, T.A. The relationship of protein conservation and sequence length. BMC Evol. Biol. 2, 20 (2002).
  Article Google Scholar
• de Mendonca, R.L., Escriva, H., Bouton, D., Laudet, V. & Pierce, R.J. Hormones and nuclear receptors in schistosome development. Parasitol. Today 16, 233–240 (2000).
  Article CAS Google Scholar
• Imase, A., Kobayashi, K., Ohmae, H., Matsuda, H. & Iwamura, Y. Horizontal and vertical transmission of mouse class I MHC sequence in Schistosoma mansoni. Parasitology 123, 163–168 (2001).
  Article CAS Google Scholar
• Xu, X.R. et al. Insight into hepatocellular carcinogenesis at transcriptome level by comparing gene expression profiles of hepatocellular carcinoma with those of corresponding noncancerous liver. Proc. Natl. Acad. Sci. USA 98, 15089–15094 (2001).
  Article CAS Google Scholar
• Kumar, S., Tamura, K., Jakobsen, I.B. & Nei M. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17, 1244–1245 (2001).
  Article CAS Google Scholar
• Mei, H. & LoVerde, P.T. Schistosoma mansoni: the developmental regulation and immunolocalization of antioxidant enzymes. Exp. Parasitol. 86, 69–78 (1997).
  Article CAS Google Scholar
• Audic, S. & Claverie, J.M. The significance of digital gene expression profiles. Genome Res. 7, 986–995 (1997).
  Article CAS Google Scholar