Nephrocystin-5, a ciliary IQ domain protein, is mutated in Senior-Loken syndrome and interacts with RPGR and calmodulin (original) (raw)

Accession codes

Accessions

GenBank/EMBL/DDBJ

References

  1. Smith, C. & Graham, J. Congenital medullary cysts of the kidneys with severe refractory anemia. Am. J. Dis. Child. 69, 369–377 (1945).
    Google Scholar
  2. Fanconi, G., Hanhart, E. & Albertini, A. Die familiäre juvenile Nephronophthise. Hel. Pediatr. Acta 6, 1–49 (1951).
    CAS Google Scholar
  3. Hildebrandt, F. Nephronophthisis—medullary cystic kidney disease. in Pediatric Nephrology (eds. Avner, E.D. & Niaudet, P.) 665–673 (Lippincott, Williams & Wilkins, Philadelphia, 2004).
    Google Scholar
  4. Hildebrandt, F. et al. A novel gene encoding an SH3 domain protein is mutated in nephronophthisis type 1. Nat. Genet. 17, 149–153 (1997).
    Article CAS Google Scholar
  5. Saunier, S. et al. A novel gene that encodes a protein with a putative src homology 3 domain is a candidate gene for familial juvenile nephronophthisis. Hum. Mol. Genet. 6, 2317–2323 (1997).
    Article CAS Google Scholar
  6. Otto, E. et al. A gene mutated in nephronophthisis and retinitis pigmentosa encodes a novel protein, nephroretinin, conserved in evolution. Am. J. Hum. Genet. 71, 1161–1167 (2002).
    Article CAS Google Scholar
  7. Mollet, G. et al. The gene mutated in juvenile nephronophthisis type 4 encodes a novel protein that interacts with nephrocystin. Nat. Genet. 32, 300–305 (2002).
    Article CAS Google Scholar
  8. Olbrich, H. et al. Mutations in a novel gene, NPHP3, cause adolescent nephronophthisis, tapeto-retinal degeneration and hepatic fibrosis. Nat. Genet. 34, 455–459 (2003).
    Article CAS Google Scholar
  9. Otto, E.A. et al. Mutations in INVS encoding inversin cause nephronophthisis type 2, linking renal cystic disease to the function of primary cilia and left-right axis determination. Nat. Genet. 34, 413–420 (2003).
    Article CAS Google Scholar
  10. Dehal, P. et al. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science 298, 2157–2167 (2002).
    Article CAS Google Scholar
  11. Otto, E. et al. Nephrocystin gene expression and sequence conservation between human, mouse, and Caenorhabditis elegans. J. Am. Soc. Nephrol. 11, 270–282 (2000).
    CAS PubMed Google Scholar
  12. Morgan, D. et al. The left-right determinant inversin has highly conserved ankyrin repeat and IQ domains and interacts with calmodulin. Hum. Genet. 110, 377–384 (2002).
    Article CAS Google Scholar
  13. Hong, D.H. et al. RPGR isoforms in photoreceptor connecting cilia and the transitional zone of motile cilia. Invest. Ophthalmol. Vis. Sci. 44, 2413–2421 (2003).
    Article Google Scholar
  14. Vervoort, R. et al. Mutational hot spot within a new RPGR exon in X-linked retinitis pigmentosa. Nat. Genet. 25, 462–466 (2000).
    Article CAS Google Scholar
  15. Breuer, D.K. et al. A comprehensive mutation analysis of RP2 and RPGR in a North American cohort of families with X-linked retinitis pigmentosa. Am. J. Hum. Genet. 70, 1545–1554 (2002).
    Article CAS Google Scholar
  16. Watnick, T. & Germino, G. From cilia to cyst. Nat. Genet. 34, 355–356 (2003).
    Article CAS Google Scholar
  17. Roepman, R. et al. The retinitis pigmentosa GTPase regulator (RPGR) interacts with novel transport-like proteins in the outer segments of rod photoreceptors. Hum. Mol. Genet. 9, 2095–2105 (2000).
    Article CAS Google Scholar
  18. Cuenca, N. et al. The neurons of the ground squirrel retina as revealed by immunostains for calcium binding proteins and neurotransmitters. J. Neurocytol. 31, 649–666 (2002).
    Article CAS Google Scholar
  19. Chen, T.Y. et al. Subunit 2 (or beta) of retinal rod cGMP-gated cation channel is a component of the 240-kDa channel-associated protein and mediates Ca2+-calmodulin modulation. Proc. Natl Acad. Sci. USA 91, 11757–11761 (1994).
    Article CAS Google Scholar
  20. Besharse, J.C. et al. The photoreceptor connecting cilium: a model for the transition zone. in The Photoreceptor Connecting Cilium: A Model for the Transitions Zone (ed. Ra, B.) 409–431 (Plenum, New York, 1990).
    Google Scholar
  21. Gattone, V.H. II, Wang, X., Harris, P.C. & Torres, V.E. Inhibition of renal cystic disease development and progression by a vasopressin V2 receptor antagonist. Nat. Med. 9, 1323–1326 (2003).
    Article CAS Google Scholar
  22. Wilkinson, D.G. Whole mount in situ hybridization of vertebrate embryos. in In Situ Hybridization: A Practical Approach (ed. Wilkinson, D.G.) 75–84 (Oxford University Press, Oxford, 1992).
    Google Scholar
  23. Hong, D.H. & Li, T. Complex expression pattern of RPGR reveals a role for purine-rich exonic splicing enhancers. Invest. Ophthalmol. Vis. Sci. 43, 3373–3382 (2002).
    PubMed Google Scholar
  24. Cheng, H. et al. Photoreceptor-specific nuclear receptor NR2E3 functions as a transcriptional activator in rod photoreceptors. Hum. Mol. Genet. 13, 1563–1575 (2004).
    Article CAS Google Scholar
  25. Gibbs, D. et al. Role of myosin VIIa and Rab27a in the motility and localization of RPE melanosomes. J. Cell Sci. 117, 6473–6483 (2004).
    Article CAS Google Scholar

Download references

Acknowledgements

We thank the affected individuals and their families for participation; R.H. Lyons for large-scale sequencing; M. Petry for technical assistance; and G. Feldhoff, T. Bonzel, H.P. Krohn, C.R. Lincke, H. Ruder, M.J. Schuermann, S. Briese, W. Wuyts, A. Raes, Y. Pirson and C. Dahan for contribution of materials and clinical data from affected individuals. This research was supported by grants from US National Institutes of Health to F.H., to A.S. and to D.S.W.; by grants to A.S. from the Foundation Fighting Blindness and Research to Prevent Blindness; and by grants from the German Research Foundation to H.O. F.H. is a Frederick G.L. Huetwell Professor. A.S. is Harold F. Falls Collegiate Professor and recipient of RPB Senior Scientific Investigator Award. B.M. is an investigator of the Howard Hughes Medical Institute. J. Hellemans is funded by the Institute for the Promotion of Innovation by Science and Technology in Flanders. A.K. is supported by grants from the German Research Foundation.

Author information

Authors and Affiliations

  1. Department of Pediatrics, University of Michigan, Ann Arbor, 48109, Michigan, USA
    Edgar A Otto, Ulla Muerb, John F O'Toole, Juliana Helou, Massimo Attanasio, Boris Utsch, John A Sayer & Friedhelm Hildebrandt
  2. McKusick-Nathans Institute for Genetic Medicine, Johns Hopkins University, Baltimore, 21205, Maryland, USA
    Bart Loeys
  3. Department of Ophthalmology, University of Michigan, Ann Arbor, 48109, Michigan, USA
    Hemant Khanna, Shirley He & Anand Swaroop
  4. Center for Medical Genetics, Ghent University Hospital, Ghent, 9000, Belgium
    Jan Hellemans, Paul Coucke & Anne De Paepe
  5. Max Planck Institute for Molecular Genetics, Berlin, Germany
    Ralf Sudbrak, Richard Reinhardt & Sven Klages
  6. Institute for Clinical Molecular Biology, Christian Albrechts University, Kiel, 24105, Germany
    Ralf Sudbrak
  7. Howard Hughes Medical Institute and Department of Internal Medicine, University of Michigan, Ann Arbor, 48109, Michigan, USA
    Shuling Fan & Benjamin Margolis
  8. Departments of Pharmacology and Neurosciences, School of Medicine, University of California at San Diego, La Jolla, 92093-0912, California, USA
    Concepcion Lillo, David Jimeno & David S Williams
  9. Department of Life Science, Graduate School of Life Science, University of Hyogo, Hyogo, 678-1297, Japan
    Motoyuki Tsuda, Isao Kawakami & Takehiro Kusakabe
  10. University Children's Hospital Freiburg, Freiburg, Germany
    Heymut Omran & Anita Imm
  11. Department of Cell and Developmental Biology, University of Michigan, Ann Arbor, 48109, Michigan, USA
    Melissa Tippens & Pamela A Raymond
  12. Molecular Medicine Unit, Institute of Child Health, University College London, London, UK
    Jo Hill & Phil Beales
  13. Institute for Molecular Biology, Medizinische Hochschule Hannover, Hannover, 30625, Germany
    Andreas Kispert
  14. Department of Human Genetics, University of Michigan, Ann Arbor, 48109, Michigan, USA
    Anand Swaroop & Friedhelm Hildebrandt

Authors

  1. Edgar A Otto
    You can also search for this author inPubMed Google Scholar
  2. Bart Loeys
    You can also search for this author inPubMed Google Scholar
  3. Hemant Khanna
    You can also search for this author inPubMed Google Scholar
  4. Jan Hellemans
    You can also search for this author inPubMed Google Scholar
  5. Ralf Sudbrak
    You can also search for this author inPubMed Google Scholar
  6. Shuling Fan
    You can also search for this author inPubMed Google Scholar
  7. Ulla Muerb
    You can also search for this author inPubMed Google Scholar
  8. John F O'Toole
    You can also search for this author inPubMed Google Scholar
  9. Juliana Helou
    You can also search for this author inPubMed Google Scholar
  10. Massimo Attanasio
    You can also search for this author inPubMed Google Scholar
  11. Boris Utsch
    You can also search for this author inPubMed Google Scholar
  12. John A Sayer
    You can also search for this author inPubMed Google Scholar
  13. Concepcion Lillo
    You can also search for this author inPubMed Google Scholar
  14. David Jimeno
    You can also search for this author inPubMed Google Scholar
  15. Paul Coucke
    You can also search for this author inPubMed Google Scholar
  16. Anne De Paepe
    You can also search for this author inPubMed Google Scholar
  17. Richard Reinhardt
    You can also search for this author inPubMed Google Scholar
  18. Sven Klages
    You can also search for this author inPubMed Google Scholar
  19. Motoyuki Tsuda
    You can also search for this author inPubMed Google Scholar
  20. Isao Kawakami
    You can also search for this author inPubMed Google Scholar
  21. Takehiro Kusakabe
    You can also search for this author inPubMed Google Scholar
  22. Heymut Omran
    You can also search for this author inPubMed Google Scholar
  23. Anita Imm
    You can also search for this author inPubMed Google Scholar
  24. Melissa Tippens
    You can also search for this author inPubMed Google Scholar
  25. Pamela A Raymond
    You can also search for this author inPubMed Google Scholar
  26. Jo Hill
    You can also search for this author inPubMed Google Scholar
  27. Phil Beales
    You can also search for this author inPubMed Google Scholar
  28. Shirley He
    You can also search for this author inPubMed Google Scholar
  29. Andreas Kispert
    You can also search for this author inPubMed Google Scholar
  30. Benjamin Margolis
    You can also search for this author inPubMed Google Scholar
  31. David S Williams
    You can also search for this author inPubMed Google Scholar
  32. Anand Swaroop
    You can also search for this author inPubMed Google Scholar
  33. Friedhelm Hildebrandt
    You can also search for this author inPubMed Google Scholar

Corresponding author

Correspondence toFriedhelm Hildebrandt.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Supplementary information

Supplementary Fig. 1

Northern blot analysis of NPHP5. (PDF 298 kb)

Supplementary Fig. 2

Whole-mount in situ hybridization analysis of Nphp5 expression during embryonic development of mouse and C. intestinalis, respectively. (PDF 188 kb)

Supplementary Fig. 3

Amino acid sequence alignment for nephrocystin-5 (NPHP5) orthologs of mouse, rat, human, zebrafish, and C. intestinalis. (PDF 191 kb)

Supplementary Fig. 4

Characterization of anti-NPHP5 antibody by immunoblot analysis. (PDF 178 kb)

Supplementary Fig. 5

Characterization of the anti-ORG15CP antibody. (PDF 228 kb)

Supplementary Table 1

Exon-flanking primers used for PCR in the human NPHP5 gene. (PDF 159 kb)

Rights and permissions

About this article

Cite this article

Otto, E., Loeys, B., Khanna, H. et al. Nephrocystin-5, a ciliary IQ domain protein, is mutated in Senior-Loken syndrome and interacts with RPGR and calmodulin.Nat Genet 37, 282–288 (2005). https://doi.org/10.1038/ng1520

Download citation