Autophagy as a cell death and tumor suppressor mechanism (original) (raw)
References
Abeliovich H, Zhang C, Dunn Jr WA, Shokat KM and Klionsky DJ . (2003). Mol. Biol. Cell, 14, 477–490.
Ahlberg J, Yucel T, Eriksson L and Glaumann H . (1987). Virchows Arch. B Cell Pathol. Incl. Mol. Pathol., 53, 79–88.
Aita VM, Liang XH, Murty VV, Pincus DL, Yu W, Cayanis E, Kalachikov S, Gilliam TC and Levine B . (1999). Genomics, 59, 59–65.
Alonso ME, Bello MJ, Gonzalez-Gomez P, Arjona D, Lomas J, de Campos JM, Isla A, Sarasa JL and Rey JA . (2003). Cancer Genet. Cytogenet., 144, 134–142.
Arico S, Petiot A, Bauvy C, Dubbelhuis PF, Meijer AJ, Codogno P and Ogier-Denis E . (2001). J. Biol. Chem., 276, 35243–35246.
Bauvy C, Gane P, Arico S, Codogno P and Ogier-Denis E . (2001). Exp. Cell Res., 268, 139–149.
Blommaart EF, Luiken JJ and Meijer AJ . (1997). Histochem. J., 29, 365–385.
Bursch W . (2001). Cell Death Differ., 8, 569–581.
Bursch W, Ellinger A, Kienzl H, Torok L, Pandey S, Sikorska M, Walker R and Hermann RS . (1996). Carcinogenesis, 17, 1595–1607.
Butler R, Mitchell SH, Tindall J and Young CYF . (2000). Cell Growth Differ., 11, 49–61.
Canuto RA, Tessitore L, Muzio G, Autelli R and Baccino FM . (1993). Carcinogenesis, 14, 2581–2587.
Chau YP, Lin SY, Chen JH and Tai MH . (2003). Histol. Histopathol., 18, 715–726.
Chen L, Wang H, Vicini S and Olsen RW . (2000). Proc. Natl. Acad. Sci. USA, 97, 11557–11562.
Chi S, Kitanaka C, Noguchi K, Mochizuki T, Nagashima Y, Shirouzu M, Fujita H, Yoshida M, Chen W, Asai A, Himeno M, Yokoyama S and Kuchino Y . (1999). Oncogene, 18, 2281–2290.
Cockle SM and Dean RT . (1984). Biochem. J., 221, 53–60.
Cohen O and Kimchi A . (2001). Cell Death Differ., 8, 6–15.
David H, Ellermann J and Uerlings I . (1992). Exp. Toxicol. Pathol., 44, 74–80.
Desai BN, Myers BR and Schreiber SL . (2002). Proc. Natl. Acad. Sci. USA, 99, 4319–4324.
Elmore SP, Qian T, Grissom SF and Lemasters JJ . (2001). FASEB J., 15, 2286–2287.
Fernandez J, Yaman I, Merrick WC, Koromilas A, Wek RC, Sood R, Hensold J and Hatzoglou M . (2002). J. Biol. Chem., 277, 2050–2058.
Gillooly DJ, Simonsen A and Stenmark H . (2001). Biochem. J., 355, 249–258.
Gorski SM, Chittaranjan S, Pleasance ED, Freeman JD, Anderson CL, Varhol RJ, Coughlin SM, Zuyderduyn SD, Jones SJ and Marra MA . (2003). Curr. Biol., 13, 358–363.
Green DR and Evan GI . (2002). Cancer Cell, 1, 19–30.
Gronostajski RM and Pardee AB . (1984). J. Cell. Physiol., 119, 127–132.
Gunn JM, Clark MG, Knowles SE, Hopgood MF and Ballard FJ . (1977). Nature, 266, 58–60.
Hanahan D and Weinberg RA . (2000). Cell, 100, 57–70.
Harding TM, Morano KA, Scott SV and Klionsky DJ . (1995). J. Cell Biol., 131, 591–602.
Hendil KB . (1977). J. Cell. Physiol., 92, 353–364.
Houri JJ, Ogier-Denis E, Trugnan G and Codogno P . (1993). Biochem. Biophys. Res. Commun., 197, 805–811.
Huang WP and Klionsky DJ . (2002). Cell Struct. Funct., 27, 409–420.
Huang WP, Scott SV, Kim J and Klionsky DJ . (2000). J. Biol. Chem., 275, 5845–5851.
Ichimura Y, Kirisako T, Takao T, Satomi Y, Shimonishi Y, Ishihara N, Mizushima N, Tanida I, Kominami E, Ohsumi M, Noda T and Ohsumi Y . (2000). Nature, 408, 488–492.
Inbal B, Bialik S, Sabanay I, Shani G and Kimchi A . (2002). J. Cell Biol., 157, 455–468.
Inbal B, Cohen O, Polak-Charcon S, Kopolovic J, Vadai E, Eisenbach L and Kimchi A . (1997). Nature, 390, 180–184.
Inoki K, Li Y, Zhu T, Wu J and Guan KL . (2002). Nat. Cell Biol., 4, 648–657.
Jang CW, Chen CH, Chen CC, Chen JY, Su YH and Chen RH . (2002). Nat. Cell Biol., 4, 51–58.
Jia L, Dourmashkin RR, Allen PD, Gray AB, Newland AC and Kelsey SM . (1997). Br. J. Haematol., 98, 673–685.
Kabeya Y, Mizushima N, Ueno T, Yamamoto A, Kirisako T, Noda T, Kominami E, Ohsumi Y and Yoshimori T . (2000). EMBO J., 19, 5720–5728.
Kamada Y, Funakoshi T, Shintani T, Nagano K, Ohsumi M and Ohsumi Y . (2000). J. Cell. Biol., 150, 1507–1513.
Kanzawa T, Kondo Y, Ito H, Kondo S and Germano I . (2003). Cancer Res., 63, 2103–2108.
Kerr JF, Wyllie AH and Currie AR . (1972). Br. J. Cancer, 26, 239–257.
Kihara A, Kabeya Y, Ohsumi Y and Yoshimori T . (2001a). EMBO Rep., 2, 330–335.
Kihara A, Noda T, Ishihara N and Ohsumi Y . (2001b). J. Cell Biol., 152, 519–530.
Kim DH, Nelson HH, Wiencke JK, Christiani DC, Wain JC, Mark EJ and Kelsey KT . (2001). Oncogene, 20, 1765–1770.
Kim J, Huang WP, Stromhaug PE and Klionsky DJ . (2002). J. Biol. Chem., 277, 763–773.
Kim J and Klionsky DJ . (2000). Annu. Rev. Biochem., 69, 303–342.
Kirisako T, Baba M, Ishihara N, Miyazawa K, Ohsumi M, Yoshimori T, Noda T and Ohsumi Y . (1999). J. Cell Biol., 147, 435–446.
Kirisako T, Ichimura Y, Okada H, Kabeya Y, Mizushima N, Yoshimori T, Ohsumi M, Takao T, Noda T and Ohsumi Y . (2000). J. Cell Biol., 151, 263–276.
Kisen GO, Tessitore L, Costelli P, Gordon PB, Schwarze PE, Baccino FM and Seglen PO . (1993). Carcinogenesis, 14, 2501–2505.
Kissil JL, Feinstein E, Cohen O, Jones PA, Tsai YC, Knowles MA, Eydmann ME and Kimchi A . (1997). Oncogene, 15, 403–407.
Kitanaka C, Kato K, Ijiri R, Sakurada K, Tomiyama A, Noguchi K, Nagashima Y, Nakagawara A, Momoi T, Toyoda Y, Kigasawa H, Nishi T, Shirouzu M, Yokoyama S, Tanaka Y and Kuchino Y . (2002). J. Natl. Cancer Inst., 94, 358–368.
Kitanaka C and Kuchino Y . (1999). Cell Death Differ., 6, 508–515.
Klionsky DJ, Cregg JM, Dunn Jr WA, Emr SD, Sakai Y, Sandoval IV, Sibirny A, Subramani S, Thumm M, Veenhuis M and Ohsumi Y . (2003). Dev. Cell, 5, 539–545.
Knecht E, Hernandez-Yago J and Grisolia S . (1984). Exp. Cell Res., 154, 224–232.
Kuma A, Mizushima N, Ishihara N and Ohsumi Y . (2002). J. Biol. Chem., 277, 18619–18625.
Lee CY, Clough EA, Yellon P, Teslovich TM, Stephan DA and Baehrecke EH . (2003). Curr. Biol., 13, 350–357.
Lee HK, Jones RT, Myers RA and Marzella L . (1992). Arch. Biochem. Biophys., 296, 271–278.
Lehmann U, Celikkaya G, Hasemeier B, Langer F and Kreipe H . (2002). Cancer Res., 62, 6634–6638.
Leist M and Jaattela M . (2001). Nat. Rev. Mol. Cell Biol., 2, 589–598.
Lemasters JJ, Nieminen AL, Qian T, Trost LC, Elmore SP, Nishimura Y, Crowe RA, Cascio WE, Bradham CA, Brenner DA and Herman B . (1998). Biochim. Biophys. Acta, 1366, 177–196.
Liang XH, Jackson S, Seaman M, Brown K, Kempkes B, Hibshoosh H and Levine B . (1999). Nature, 402, 672–676.
Liang XH, Kleeman LK, Jiang HH, Gordon G, Goldman JE, Berry G, Herman B and Levine B . (1998). J. Virol., 72, 8586–8596.
Liang XH, Yu J, Brown K and Levine B . (2001). Cancer Res., 61, 3443–3449.
Lockwood TD and Minassian IA . (1982). Biochem. J., 206, 251–258.
Lowe SW and Lin AW . (2000). Carcinogenesis, 21, 485–495.
Mann SS and Hammarback JA . (1994). J. Biol. Chem., 269, 11492–11497.
McCarthy NJ, Whyte MK, Gilbert CS and Evan GI . (1997). J. Cell Biol., 136, 215–227.
Mizushima N, Kuma A, Kobayashi Y, Yamamoto A, Matsubae M, Takao T, Natsume T, Ohsumi Y and Yoshimori T . (2003a). J. Cell Sci., 116, 1679–1688.
Mizushima N, Noda T and Ohsumi Y . (1999). EMBO J., 18, 3888–3896.
Mizushima N, Noda T, Yoshimori T, Tanaka Y, Ishii T, George MD, Klionsky DJ, Ohsumi M and Ohsumi Y . (1998). Nature, 395, 395–398.
Mizushima N, Ohsumi Y and Yoshimori T . (2002). Cell Struct. Funct., 27, 421–429.
Mizushima N, Yamamoto A, Hatano M, Kobayashi Y, Kabeya Y, Suzuki K, Tokuhisa T, Ohsumi Y and Yoshimori T . (2001). J. Cell Biol., 152, 657–668.
Mizushima N, Yoshimori T and Ohsumi Y . (2003b). Int. J. Biochem. Cell Biol., 35, 553–561.
Mizushima N, Yamamoto A, Matsul M, Yashimori T and Ohsumi Y . (2003c). Mol. Biol. Cell, published online on December 29.
Natarajan K, Meyer MR, Jackson BM, Slade D, Roberts C, Hinnebusch AG and Marton MJ . (2001). Mol. Cell. Biol., 21, 4347–4368.
Noda T, Suzuki K and Ohsumi Y . (2002). Trends Cell. Biol., 12, 231–235.
Ogier-Denis E, Couvineau A, Maoret JJ, Houri JJ, Bauvy C, De Stefanis D, Isidoro C, Laburthe M and Codogno P . (1995). J. Biol. Chem., 270, 13–16.
Ogier-Denis E, Pattingre S, El Benna J and Codogno P . (2000). J. Biol. Chem., 275, 39090–39095.
Ogier-Denis E, Petiot A, Bauvy C and Codogno P . (1997). J. Biol. Chem., 272, 24599–24603.
Otsuka H and Moskowitz M . (1978). Exp. Cell Res., 112, 127–135.
Paglin S, Hollister T, Delohery T, Hackett N, McMahill M, Sphicas E, Domingo D and Yahalom J . (2001). Cancer Res., 61, 439–444.
Panaretou C, Domin J, Cockcroft S and Waterfield MD . (1997). J. Biol. Chem., 272, 2477–2485.
Papadopoulos T and Pfeifer U . (1987). Exp. Cell Res., 171, 110–121.
Pattingre S, Bauvy C and Codogno P . (2003a). J. Biol. Chem., 278, 16667–16674.
Pattingre S, De Vries L, Bauvy C, Chantret I, Cluzeaud F, Ogier-Denis E, Vandewalle A and Codogno P . (2003b). J. Biol. Chem., 278, 20995–21002.
Petiot A, Ogier-Denis E, Blommaart EF, Meijer AJ and Codogno P . (2000). J. Biol. Chem., 275, 992–998.
Pfeifer U and Dunker R . (1985). Prog. Clin. Biol. Res., 180, 659–661.
Pfeifer U, Tessitore L, Bonelli G and Baccino FM . (1988). Virchows Arch. B Cell Pathol. Incl. Mol. Pathol., 55, 363–369.
Piacentini M, Evangelisti C, Mastroberardino PG, Nardacci R and Kroemer G . (2003). Cell Death Differ., 10, 937–939.
Qu X, Yu J, Bhagat G, Furuya N, Hibshoosh H, Troxel A, Rosen J, Eskelinen EL, Mizushima N, Ohsumi Y, Cattoretti G and Levine B . (2003). J. Clin. Invest., 112, 1809–1820.
Raveh T, Droguett G, Horwitz MS, DePinho RA and Kimchi A . (2001). Nat. Cell Biol., 3, 1–7.
Raveh T and Kimchi A . (2001). Exp. Cell Res., 264, 185–192.
Reed JC . (2002). Nat. Rev. Drug Discov., 1, 111–121.
Rez G, Toth S and Palfia Z . (1999). Carcinogenesis, 20, 1893–1898.
Sagiv Y, Legesse-Miller A, Porat A and Elazar Z . (2000). EMBO J., 19, 1494–1504.
Sanchez-Cespedes M, Esteller M, Wu L, Nawroz-Danish H, Yoo GH, Koch WM, Jen J, Herman JG and Sidransky D . (2000). Cancer Res., 60, 892–895.
Schwarze PE and Seglen PO . (1985). Exp. Cell Res., 157, 15–28.
Schweichel JU and Merker HJ . (1973). Teratology, 7, 253–266.
Scott SV, Nice III DC, Nau JJ, Weisman LS, Kamada Y, Keizer-Gunnink I, Funakoshi T, Veenhuis M, Ohsumi Y and Klionsky DJ . (2000). J. Biol. Chem., 275, 25840–25849.
Seglen PO and Gordon PB . (1982). Proc. Natl. Acad. Sci. USA, 79, 1889–1892.
Shintani T, Mizushima N, Ogawa Y, Matsuura A, Noda T and Ohsumi Y . (1999). EMBO J., 18, 5234–5241.
Simpson DJ, Clayton RN and Farrell WE . (2002). Oncogene, 21, 1217–1224.
Stack JH, DeWald DB, Takegawa K and Emr SD . (1995). J. Cell Biol., 129, 321–334.
Suzuki K, Kirisako T, Kamada Y, Mizushima N, Noda T and Ohsumi Y . (2001). EMBO J., 20, 5971–5981.
Tada Y, Wada M, Taguchi K, Mochida Y, Kinugawa N, Tsuneyoshi M, Naito S and Kuwano M . (2002). Cancer Res., 62, 4048–4053.
Talloczy Z, Jiang W, Virgin HWt, Leib DA, Scheuner D, Kaufman RJ, Eskelinen EL and Levine B . (2002). Proc. Natl. Acad. Sci. USA, 99, 190–195.
Tang X, Khuri FR, Lee JJ, Kemp BL, Liu D, Hong WK and Mao L . (2000). J. Natl. Cancer Inst., 92, 1511–1516.
Tanida I, Mizushima N, Kiyooka M, Ohsumi M, Ueno T, Ohsumi Y and Kominami E . (1999). Mol. Biol. Cell, 10, 1367–1379.
Tanida I, Tanida-Miyake E, Komatsu M, Ueno T and Kominami E . (2002). J. Biol. Chem., 277, 13739–13744.
Tanida I, Tanida-Miyake E, Ueno T and Kominami E . (2001). J. Biol. Chem., 276, 1701–1706.
Tee AR, Fingar DC, Manning BD, Kwiatkowski DJ, Cantley LC and Blenis J . (2002). Proc. Natl. Acad. Sci. USA, 99, 13571–13576.
Tessitore L, Bonelli G, Cecchini G, Autelli R, Amenta JS and Baccino FM . (1988). Biochem. J., 251, 483–490.
Thumm M, Egner R, Koch B, Schlumpberger M, Straub M, Veenhuis M and Wolf DH . (1994). FEBS Lett., 349, 275–280.
Toth S, Nagy K, Palfia Z and Rez G . (2002). Cell Tissue Res., 309, 409–416.
Tsukada M and Ohsumi Y . (1993). FEBS Lett., 333, 169–174.
Tsuneoka M, Umata T, Kimura H, Koda Y, Nakajima M, Kosai K, Takahashi T, Takahashi Y and Yamamoto A . (2003). Cell Struct. Funct., 28, 195–204.
Vande Velde C, Cizeau J, Dubik D, Alimonti J, Brown T, Israels S, Hakem R and Greenberg AH . (2000). Mol. Cell. Biol., 20, 5454–5468.
Wang WJ, Kuo JC, Yao CC and Chen RH . (2002). J. Cell Biol., 159, 169–179.
Wen S, Stolarov J, Myers MP, Su JD, Wigler MH, Tonks NK and Durden DL . (2001). Proc. Natl. Acad. Sci. USA, 98, 4622–4627.
Wishart MJ, Taylor GS and Dixon JE . (2001). Cell, 105, 817–820.
Xue L, Fletcher GC and Tolkovsky AM . (1999). Mol. Cell. Neurosci., 14, 180–198.
Xue L, Fletcher GC and Tolkovsky AM . (2001). Curr. Biol., 11, 361–365.
Yanagisawa H, Miyashita T, Nakano Y and Yamamoto D . (2003). Cell Death Differ., 10, 798–807.
Yao KC, Komata T, Kondo Y, Kanzawa T, Kondo S and Germano IM . (2003). J. Neurosurg., 98, 378–384.
Yucel T, Ahlberg J and Glaumann H . (1989). Exp. Mol. Pathol., 50, 38–49.
Yue Z, Jin S, Yang C, Levine AJ and Heintz N . (2003). Proc. Natl. Acad. Sci. USA, 100, 15077–15082.