Bacterial cell factories for recombinant protein production; expanding the catalogue (original) (raw)

• Sorensen HP: Towards universal systems for recombinant gene expression. Microb Cell Fact. 2010, 9: 27-10.1186/1475-2859-9-27.
  Article Google Scholar
• Ferrer-Miralles N, Domingo-Espin J, Corchero JL, Vazquez E, Villaverde A: Microbial factories for recombinant pharmaceuticals. Microb Cell Fact. 2009, 8: 17-10.1186/1475-2859-8-17.
  Article Google Scholar
• Ward OP: Production of recombinant proteins by filamentous fungi. Biotechnol Adv. 2012, 30: 1119-1139. 10.1016/j.biotechadv.2011.09.012.
  Article CAS Google Scholar
• Arya R, Bhattacharya A, Saini KS: Dictyostelium discoideum –a promising expression system for the production of eukaryotic proteins. FASEB J. 2008, 22: 4055-4066. 10.1096/fj.08-110544.
  Article CAS Google Scholar
• Decker EL, Reski R: Moss bioreactors producing improved biopharmaceuticals. Curr Opin Biotechnol. 2007, 18: 393-398. 10.1016/j.copbio.2007.07.012.
  Article CAS Google Scholar
• Potvin G, Zhang Z: Strategies for high-level recombinant protein expression in transgenic microalgae: a review. Biotechnol Adv. 2010, 28: 910-918.
  Article CAS Google Scholar
• LEXSY Biosafety Status. 2013, http://www.jenabioscience.com/cms/en/1/browse/1879_biosafety.html . 2013 Ref Type: Electronic Citation
• Porro D, Gasser B, Fossati T, Maurer M, Branduardi P, Sauer M, et al: Production of recombinant proteins and metabolites in yeasts: when are these systems better than bacterial production systems?. Appl Microbiol Biotechnol. 2011, 89: 939-948. 10.1007/s00253-010-3019-z.
  Article CAS Google Scholar
• Corchero JL, Gasser B, Resina D, Smith W, Parrilli E, Vazquez F, et al: Unconventional microbial systems for the cost-efficient production of high-quality protein therapeutics. Biotechnol Adv. 2013, 31: 140-153. 10.1016/j.biotechadv.2012.09.001.
  Article CAS Google Scholar
• Mustalahti E, Saloheimo M, Joensuu JJ: Intracellular protein production in Trichoderma reesei (Hypocrea jecorina) with hydrophobin fusion technology. N Biotechnol. 2011, 30: 262-268.
  Article Google Scholar
• Idiris A, Tohda H, Kumagai H, Takegawa K: Engineering of protein secretion in yeast: strategies and impact on protein production. Appl Microbiol Biotechnol. 2010, 86: 403-417. 10.1007/s00253-010-2447-0.
  Article CAS Google Scholar
• Decker EL, Reski R: Current achievements in the production of complex biopharmaceuticals with moss bioreactors. Bioprocess Biosyst Eng. 2008, 31: 3-9. 10.1007/s00449-007-0151-y.
  Article CAS Google Scholar
• Gerngross TU: Advances in the production of human therapeutic proteins in yeasts and filamentous fungi. Nat Biotechnol. 2004, 22: 1409-1414. 10.1038/nbt1028.
  Article CAS Google Scholar
• Spolaore P, Joannis-Cassan C, Duran E, Isambert A: Commercial applications of microalgae. J Biosci Bioeng. 2006, 101: 87-96. 10.1263/jbb.101.87.
  Article CAS Google Scholar
• Rme-Vega TC, Lim DK, Timmins M, Vernen F, Li Y, Schenk PM: Microalgal biofactories: a promising approach towards sustainable omega-3 fatty acid production. Microb Cell Fact. 2012, 11: 96-10.1186/1475-2859-11-96.
  Article Google Scholar
• Hempel F, Bozarth AS, Lindenkamp N, Klingl A, Zauner S, Linne U, et al: Microalgae as bioreactors for bioplastic production. Microb Cell Fact. 2011, 10: 81-10.1186/1475-2859-10-81.
  Article CAS Google Scholar
• Specht E, Miyake-Stoner S, Mayfield S: Micro-algae come of age as a platform for recombinant protein production. Biotechnol Lett. 2010, 32: 1373-1383. 10.1007/s10529-010-0326-5.
  Article CAS Google Scholar
• Rhee SJ, Lee JE, Lee CH: Importance of lactic acid bacteria in Asian fermented foods. Microb Cell Fact. 2011, 10 (1): S5-10.1186/1475-2859-10-5.
  Article Google Scholar
• De Vos WM: Systems solutions by lactic acid bacteria: from paradigms to practice. Microb Cell Fact. 2011, 10 (1): S2-10.1186/1475-2859-10-2.
  Article Google Scholar
• Arendt EK, Moroni A, Zannini E: Medical nutrition therapy: use of sourdough lactic acid bacteria as a cell factory for delivering functional biomolecules and food ingredients in gluten free bread. Microb Cell Fact. 2011, 10 (1): S15-10.1186/1475-2859-10-15.
  Article Google Scholar
• Teusink B, Bachmann H, Molenaar D: Systems biology of lactic acid bacteria: a critical review. Microb Cell Fact. 2011, 10 (1): S11-10.1186/1475-2859-10-11.
  Article Google Scholar
• Garcia-Fruitos E: Lactic Acid Bacteria: a promising alternative for recombinant protein production. Microb Cell Fact. 2012, 11: 157-10.1186/1475-2859-11-157.
  Article CAS Google Scholar
• Peterbauer C, Maischberger T, Haltrich D: Food-grade gene expression in lactic acid bacteria. Biotechnol J. 2011, 6: 1147-1161. 10.1002/biot.201100034.
  Article CAS Google Scholar
• Morello E, Bermudez-Humaran LG, Llull D, Sole V, Miraglio N, Langella P, et al: Lactococcus lactis, an efficient cell factory for recombinant protein production and secretion. J Mol Microbiol Biotechnol. 2008, 14: 48-58. 10.1159/000106082.
  Article CAS Google Scholar
• Pontes DS, de Azevedo MS, Chatel JM, Langella P, Azevedo V, Miyoshi A: Lactococcus lactis as a live vector: heterologous protein production and DNA delivery systems. Protein Expr Purif. 2011, 79: 165-175. 10.1016/j.pep.2011.06.005.
  Article CAS Google Scholar
• Daniel C, Roussel Y, Kleerebezem M, Pot B: Recombinant lactic acid bacteria as mucosal biotherapeutic agents. Trends Biotechnol. 2011, 29: 499-508. 10.1016/j.tibtech.2011.05.002.
  Article CAS Google Scholar
• Hu S, Kong J, Sun Z, Han L, Kong W, Yang P: Heterologous protein display on the cell surface of lactic acid bacteria mediated by the S-layer protein. Microb Cell Fact. 2011, 10: 86-10.1186/1475-2859-10-86.
  Article CAS Google Scholar
• Bermudez-Humaran LG, Kharrat P, Chatel JM, Langella P: Lactococci and lactobacilli as mucosal delivery vectors for therapeutic proteins and DNA vaccines. Microb Cell Fact. 2011, 10 (1): S4-10.1186/1475-2859-10-4.
  Article Google Scholar
• Scavone P, Miyoshi A, Rial A, Chabalgoity A, Langella P, Azevedo V, et al: Intranasal immunisation with recombinant lactococcus lactis displaying either anchored or secreted forms of proteus mirabilis MrpA fimbrial protein confers specific immune response and induces a significant reduction of kidney bacterial colonisation in mice. Microbes Infect. 2007, 9: 821-828. 10.1016/j.micinf.2007.02.023.
  Article CAS Google Scholar
• Chen R: Bacterial expression systems for recombinant protein production: E. coli and beyond. Biotechnol Adv. 2012, 30: 1102-1107. 10.1016/j.biotechadv.2011.09.013.
  Article CAS Google Scholar
• Terpe K: Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol. 2003, 60: 523-533.
  Article CAS Google Scholar
• Hahn HP, von Specht BU: Secretory delivery of recombinant proteins in attenuated salmonella strains: potential and limitations of type I protein transporters. FEMS Immunol Med Microbiol. 2003, 37: 87-98. 10.1016/S0928-8244(03)00092-0.
  Article CAS Google Scholar
• Simon B, Nomellini J, Chiou P, Bingle W, Thornton J, Smit J, et al: Recombinant vaccines against infectious hematopoietic necrosis virus: production by the Caulobacter crescentus S-layer protein secretion system and evaluation in laboratory trials. Dis Aquat Organ. 2001, 44: 17-27.
  Article CAS Google Scholar
• Duncan G, Tarling CA, Bingle WH, Nomellini JF, Yamage M, Dorocicz IR, et al: Evaluation of a new system for developing particulate enzymes based on the surface (S)-layer protein (RsaA) of Caulobacter crescentus: fusion with the beta-1,4-glycanase (Cex) from the cellulolytic bacterium Cellulomonas fimi yields a robust, catalytically active product. Appl Biochem Biotechnol. 2005, 127: 95-110. 10.1385/ABAB:127:2:095.
  Article CAS Google Scholar
• Laible PD, Scott HN, Henry L, Hanson DK: Towards higher-throughput membrane protein production for structural genomics initiatives. J Struct Funct Genomics. 2004, 5: 167-172.
  Article CAS Google Scholar
• Duilio A, Tutino ML, Marino G: Recombinant protein production in Antarctic Gram-negative bacteria. Methods Mol Biol. 2004, 267: 225-237.
  CAS Google Scholar
• Rippa V, Papa R, Giuliani M, Pezzella C, Parrilli E, Tutino ML, et al: Regulated recombinant protein production in the Antarctic bacterium Pseudoalteromonas haloplanktis TAC125. Methods Mol Biol. 2012, 824: 203-218. 10.1007/978-1-61779-433-9_10.
  Article CAS Google Scholar
• Giuliani M, Parrilli E, Ferrer P, Baumann K, Marino C, Tutino ML: Process optimization for recombinant protein production in the psychrophilic bacterium Pseudoalteromonas haloplanktis. Process Biochem. 2011, 46: 953-959. 10.1016/j.procbio.2011.01.011.
  Article CAS Google Scholar
• Vigentini I, Merico A, Tutino ML, Compagno C, Marino G: Optimization of recombinant human nerve growth factor production in the psychrophilic Pseudoalteromonas haloplanktis. J Biotechnol. 2006, 127: 141-150. 10.1016/j.jbiotec.2006.05.019.
  Article CAS Google Scholar
• Miyake R, Kawamoto J, Wei YL, Kitagawa M, Kato I, Kurihara T, et al: Construction of a low-temperature protein expression system using a cold-adapted bacterium, Shewanella sp. strain Ac10, as the host. Appl Environ Microbiol. 2007, 73: 4849-4856. 10.1128/AEM.00824-07.
  Article CAS Google Scholar
• Retallack DM, Jin H, Chew L: Reliable protein production in a Pseudomonas fluorescens expression system. Protein Expr Purif. 2011, 81: 157-165.
  Article Google Scholar
• Jin H, Cantin GT, Maki S, Chew LC, Resnick SM, Ngai J, et al: Soluble periplasmic production of human granulocyte colony-stimulating factor (G-CSF) in Pseudomonas fluorescens. Protein Expr Purif. 2011, 78: 69-77. 10.1016/j.pep.2011.03.002.
  Article CAS Google Scholar
• Dammeyer T, Steinwand M, Kruger SC, Dubel S, Hust M, Timmis KN: Efficient production of soluble recombinant single chain Fv fragments by a Pseudomonas putida strain KT2440 cell factory. Microb Cell Fact. 2011, 10: 11-10.1186/1475-2859-10-11.
  Article CAS Google Scholar
• Krzeslak J, Braun P, Voulhoux R, Cool RH, Quax WJ: Heterologous production of Escherichia coli penicillin G acylase in Pseudomonas aeruginosa. J Biotechnol. 2009, 142: 250-258. 10.1016/j.jbiotec.2009.05.005.
  Article CAS Google Scholar
• Tokunaga H, Arakawa T, Tokunaga M: Novel soluble expression technologies derived from unique properties of halophilic proteins. Appl Microbiol Biotechnol. 2010, 88: 1223-1231. 10.1007/s00253-010-2832-8.
  Article CAS Google Scholar
• Nagayoshi C, Tokunaga H, Hayashi A, Harazono H, Hamasaki K, Ando A, et al: Efficient expression of haloarchaeal nucleoside diphosphate kinase via strong porin promoter in moderately halophilic bacteria. Protein Pept Lett. 2006, 13: 611-615. 10.2174/092986606777145760.
  Article CAS Google Scholar
• Anne J, Maldonado B, Van IJ, Van ML, Bernaerts K: Recombinant protein production and streptomycetes. J Biotechnol. 2012, 158: 159-167. 10.1016/j.jbiotec.2011.06.028.
  Article CAS Google Scholar
• Liu L, Yang H, Shin HD, Li J, Du G, Chen J: Recent advances in recombinant protein expression by Corynebacterium, Brevibacterium, and Streptomyces: from transcription and translation regulation to secretion pathway selection. Appl Microbiol Biotechnol. 2013, 97: 9597-9608. 10.1007/s00253-013-5250-x.
  Article CAS Google Scholar
• Ayala JC, Pimienta E, Rodriguez C, Anne J, Vallin C, Milanes MT, et al: Use of Strep-tag II for rapid detection and purification of Mycobacterium tuberculosis recombinant antigens secreted by Streptomyces lividans. J Microbiol Methods. 2013, 94: 192-198. 10.1016/j.mimet.2013.06.004.
  Article CAS Google Scholar
• Chi WJ, Song JH, Oh EA, Park SW, Chang YK, Kim ES, et al: Medium optimization and application of an affinity column chromatography for streptomyces griseus trypsin production from the recombinant Streptomyces griseus. J Microbiol Biotechnol. 2009, 19: 1191-1196.
  Article CAS Google Scholar
• Chary VK, de la Fuente JL, Leitao AL, Liras P, Martin JF: Overexpression of the lat gene in Nocardia lactamdurans from strong heterologous promoters results in very high levels of lysine-6-aminotransferase and up to two-fold increase in cephamycin C production. Appl Microbiol Biotechnol. 2000, 53: 282-288. 10.1007/s002530050022.
  Article CAS Google Scholar
• Connell ND: Expression systems for use in actinomycetes and related organisms. Curr Opin Biotechnol. 2001, 12: 446-449. 10.1016/S0958-1669(00)00243-3.
  Article CAS Google Scholar
• Guo XQ, Wei YM, Yu B: Recombinant Mycobacterium smegmatis expressing Hsp65-hIL-2 fusion protein and its influence on lymphocyte function in mice. Asian Pac J Trop Med. 2012, 5: 347-351. 10.1016/S1995-7645(12)60056-X.
  Article CAS Google Scholar
• Noens EE, Williams C, Anandhakrishnan M, Poulsen C, Ehebauer MT, Wilmanns M: Improved mycobacterial protein production using a Mycobacterium smegmatis groEL1DeltaC expression strain. BMC Biotechnol. 2011, 11: 27-10.1186/1472-6750-11-27.
  Article CAS Google Scholar
• Srivastava P, Deb JK: Gene expression systems in corynebacteria. Protein Expr Purif. 2005, 40: 221-229. 10.1016/j.pep.2004.06.017.
  Article CAS Google Scholar
• Kikuchi Y, Itaya H, Date M, Matsui K, Wu LF: Production of Chryseobacterium proteolyticum protein-glutaminase using the twin-arginine translocation pathway in Corynebacterium glutamicum. Appl Microbiol Biotechnol. 2008, 78: 67-74. 10.1007/s00253-007-1283-3.
  Article CAS Google Scholar
• Itaya H, Kikuchi Y: Secretion of Streptomyces mobaraensis pro-transglutaminase by coryneform bacteria. Appl Microbiol Biotechnol. 2008, 78: 621-625. 10.1007/s00253-007-1340-y.
  Article CAS Google Scholar
• Paradis FW, Warren RA, Kilburn DG, Miller RC: The expression of Cellulomonas fimi cellulase genes in Brevibacterium lactofermentum. Gene. 1987, 61: 199-206. 10.1016/0378-1119(87)90114-4.
  Article CAS Google Scholar
• van Dijl JM, Hecker M: Bacillus subtilis: from soil bacterium to super-secreting cell factory. Microb Cell Fact. 2013, 12: 3-10.1186/1475-2859-12-3.
  Article CAS Google Scholar
• Terpe K: Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems. Appl Microbiol Biotechnol. 2006, 72: 211-222. 10.1007/s00253-006-0465-8.
  Article CAS Google Scholar
• Westers L, Westers H, Quax WJ: Bacillus subtilis as cell factory for pharmaceutical proteins: a biotechnological approach to optimize the host organism. Biochim Biophys Acta. 2004, 1694: 299-310. 10.1016/j.bbamcr.2004.02.011.
  Article CAS Google Scholar
• Pohl S, Harwood CR: Heterologous protein secretion by bacillus species from the cradle to the grave. Adv Appl Microbiol. 2010, 73: 1-25.
  Article Google Scholar
• Biedendieck R, Bunk B, Furch T, Franco-Lara E, Jahn M, Jahn D: Systems biology of recombinant protein production in bacillus megaterium. Adv Biochem Eng Biotechnol. 2010, 120: 133-161.
  CAS Google Scholar
• Schallmey M, Singh A, Ward OP: Developments in the use of Bacillus species for industrial production. Can J Microbiol. 2004, 50: 1-17. 10.1139/w03-076.
  Article CAS Google Scholar
• Yang M, Zhang W, Ji S, Cao P, Chen Y, Zhao X: Generation of an artificial double promoter for protein expression in Bacillus subtilis through a promoter trap system. PLoS One. 2013, 8: e56321-10.1371/journal.pone.0056321.
  Article CAS Google Scholar
• Kajino T, Ohto C, Muramatsu M, Obata S, Udaka S, Yamada Y, et al: A protein disulfide isomerase gene fusion expression system that increases the extracellular productivity of Bacillus brevis. Appl Environ Microbiol. 2000, 66: 638-642. 10.1128/AEM.66.2.638-642.2000.
  Article CAS Google Scholar
• Kajino T, Kato K, Miyazaki C, Asami O, Hirai M, Yamada Y, et al: Isolation of a protease-deficient mutant of Bacillus brevis and efficient secretion of a fungal protein disulfide isomerase by the mutant. J Biosci Bioeng. 1999, 87: 37-42. 10.1016/S1389-1723(99)80005-X.
  Article CAS Google Scholar
• David F, Steinwand M, Hust M, Bohle K, Ross A, Dubel S, et al: Antibody production in Bacillus megaterium: strategies and physiological implications of scaling from micro titer plates to industrial bioreactors. Biotechnol J. 2011, 6: 1516-1531. 10.1002/biot.201000417.
  Article CAS Google Scholar
• Toyokawa Y, Takahara H, Reungsang A, Fukuta M, Hachimine Y, Tachibana S, et al: Purification and characterization of a halotolerant serine proteinase from thermotolerant Bacillus licheniformis RKK-04 isolated from Thai fish sauce. Appl Microbiol Biotechnol. 2010, 86: 1867-1875. 10.1007/s00253-009-2434-5.
  Article CAS Google Scholar
• Deb P, Talukdar SA, Mohsina K, Sarker PK, Sayem SA: Production and partial characterization of extracellular amylase enzyme from P-001. Springerplus. 2013, 2: 154-10.1186/2193-1801-2-154.
  Article Google Scholar
• Le LY, Azevedo V, Oliveira SC, Freitas DA, Miyoshi A, Bermudez-Humaran LG, et al: Protein secretion in Lactococcus lactis: an efficient way to increase the overall heterologous protein production. Microb Cell Fact. 2005, 4: 2-10.1186/1475-2859-4-2.
  Article Google Scholar
• Innocentin S, Guimaraes V, Miyoshi A, Azevedo V, Langella P, Chatel JM, et al: Lactococcus lactis expressing either Staphylococcus aureus fibronectin-binding protein A or Listeria monocytogenes internalin A can efficiently internalize and deliver DNA in human epithelial cells. Appl Environ Microbiol. 2009, 75: 4870-4878. 10.1128/AEM.00825-09.
  Article CAS Google Scholar
• Miyoshi A, Bermudez-Humaran LG, Ribeiro LA, Le LY, Oliveira SC, Langella P, et al: Heterologous expression of Brucella abortus GroEL heat-shock protein in Lactococcus lactis. Microb Cell Fact. 2006, 5: 14-10.1186/1475-2859-5-14.
  Article Google Scholar
• Nguyen TT, Nguyen HA, Arreola SL, Mlynek G, Djinovic-Carugo K, Mathiesen G, et al: Homodimeric beta-galactosidase from Lactobacillus delbrueckii subsp. bulgaricus DSM 20081: expression in Lactobacillus plantarum and biochemical characterization. J Agric Food Chem. 2012, 60: 1713-1721. 10.1021/jf203909e.
  Article CAS Google Scholar
• Zhao LL, Liu M, Ge JW, Qiao XY, Li YJ, Liu DQ: Expression of infectious pancreatic necrosis virus (IPNV) VP2-VP3 fusion protein in Lactobacillus casei and immunogenicity in rainbow trouts. Vaccine. 2012, 30: 1823-1829. 10.1016/j.vaccine.2011.12.132.
  Article CAS Google Scholar
• Eom JE, Moon SK, Moon GS: Heterologous production of pediocin PA-1 in Lactobacillus reuteri. J Microbiol Biotechnol. 2010, 20: 1215-1218. 10.4014/jmb.1003.03026.
  Article CAS Google Scholar
• Damelin LH, Mavri-Damelin D, Klaenhammer TR, Tiemessen CT: Plasmid transduction using bacteriophage Phi(adh) for expression of CC chemokines by Lactobacillus gasseri ADH. Appl Environ Microbiol. 2010, 76: 3878-3885. 10.1128/AEM.00139-10.
  Article CAS Google Scholar
• Chen GQ: New challenges and opportunities for industrial biotechnology. Microb Cell Fact. 2012, 11: 111-10.1186/1475-2859-11-111.
  Article CAS Google Scholar
• Lee SY, Mattanovich D, Villaverde A: Systems metabolic engineering, industrial biotechnology and microbial cell factories. Microb Cell Fact. 2012, 11: 156-10.1186/1475-2859-11-156.
  Article CAS Google Scholar