Microbial ecosystems therapeutics: a new paradigm in medicine? (original) (raw)

• Allen-Vercoe, E., Reid, G., Viner, N., Gloor, G.B., Hota, S., Kim, P., Lee, C.H., O'Doherty, K., Vanner, S., Weese, J.S. and Petrof, E.O., 2012. A Canadian working group report on fecal microbial therapy: microbial ecosystems therapeutics. Canadian Journal of Gastroenterology 26: 457-462.
  'A Canadian working group report on fecal microbial therapy: microbial ecosystems therapeutics ' () 26 _Canadian Journal of Gastroenterology : 457 -462 .
  A Canadian working group report on fecal microbial therapy: microbial ecosystems therapeutics Canadian Journal of Gastroenterology 26 457 462
  )| false
• Search Google Scholar
• Andoh, A., Imaeda, H., Aomatsu, T., Inatomi, O., Bamba, S., Sasaki, M., Saito, Y., Tsujikawa, T. and Fujiyama, Y., 2011. Comparison of the fecal microbiota profiles between ulcerative colitis and Crohn's disease using terminal restriction fragment length polymorphism analysis. Journal of Gastroenterology 46: 479-486.
  'Comparison of the fecal microbiota profiles between ulcerative colitis and Crohn's disease using terminal restriction fragment length polymorphism analysis ' () 46 _Journal of Gastroenterology : 479 -486 .
  Comparison of the fecal microbiota profiles between ulcerative colitis and Crohn's disease using terminal restriction fragment length polymorphism analysis Journal of Gastroenterology 46 479 486
  )| false
• Search Google Scholar
• Arumugam, M., Raes, J., Pelletier, E., Le Paslier, D., Yamada, T., Mende, D.R., Fernandes, G.R., Tap, J., Bruls, T., Batto, J.M., Bertalan, M., Borruel, N., Casellas, F., Fernandez, L., Gautier, L., Hansen, T., Hattori, M., Hayashi, T., Kleerebezem, M., Kurokawa, K., Leclerc, M., Levenez, F., Manichanh, C., Nielsen, H.B., Nielsen, T., Pons, N., Poulain, J., Qin, J., Sicheritz-Ponten, T., Tims, S., Torrents, D., Ugarte, E., Zoetendal, E.G., Wang, J., Guarner, F., Pedersen, O., De Vos, W.M., Brunak, S., Dore, J., Antolin, M., Artiguenave, F., Blottiere, H.M., Almeida, M., Brechot, C., Cara, C., Chervaux, C., Cultrone, A., Delorme, C., Denariaz, G., Dervyn, R., Foerstner, K.U., Friss, C., Van de Guchte, M., Guedon, E., Haimet, F., Huber, W., Van Hylckama-Vlieg, J., Jamet, A., Juste, C., Kaci, G., Knol, J., Lakhdari, O., Layec, S., Le Roux, K., Maguin, E., Merieux, A., Melo Minardi, R., M'Rini, C., Muller, J., Oozeer, R., Parkhill, J., Renault, P., Rescigno, M., Sanchez, N., Sunagawa, S., Torrejon, A., Turner, K., Vandemeulebrouck, G., Varela, E., Winogradsky, Y., Zeller, G., Weissenbach, J., Ehrlich, S.D. and Bork, P., 2011. Enterotypes of the human gut microbiome. Nature 473: 174-180.
  'Enterotypes of the human gut microbiome ' () 473 _Nature : 174 -180 .
  Enterotypes of the human gut microbiome Nature 473 174 180
  )| false
• Search Google Scholar
• Bakken, J.S., 2009. Fecal bacteriotherapy for recurrent Clostridium difficile infection. Anaerobe 15: 285-289.
  'Fecal bacteriotherapy for recurrent Clostridium difficile infection ' () 15 _Anaerobe : 285 -289 .
  Fecal bacteriotherapy for recurrent Clostridium difficile infection Anaerobe 15 285 289
  )| false
• Search Google Scholar
• Bartlett, J.G. and Gerding, D.N., 2008. Clinical recognition and diagnosis of Clostridium difficile infection. Clinical Infectious Diseases 46 Suppl. 1: S12-S18.
  'Clinical recognition and diagnosis of Clostridium difficile infection ' () 46 _Clinical Infectious Diseases : S12 -S18 .
  Clinical recognition and diagnosis of Clostridium difficile infection Clinical Infectious Diseases 46 S12 S18
  )| false
• Search Google Scholar
• Bell, M.J., Shackelford, P.G., Feigin, R.D., Ternberg, J.L. and Brotherton, T., 1979. Alterations in gastrointestinal microbiota during antimicrobial therapy for necrotizing enterocolitis. Pediatrics 63: 425-428.
  'Alterations in gastrointestinal microbiota during antimicrobial therapy for necrotizing enterocolitis ' () 63 _Pediatrics : 425 -428 .
  Alterations in gastrointestinal microbiota during antimicrobial therapy for necrotizing enterocolitis Pediatrics 63 425 428
  )| false
• Search Google Scholar
• Bercik, P., Denou, E., Collins, J., Jackson, W., Lu, J., Jury, J., Deng, Y., Blennerhassett, P., Macri, J., McCoy, K.D., Verdu, E.F. and Collins, S.M., 2011. The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice. Gastroenterology 141: 599-609.
  'The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice ' () 141 _Gastroenterology : 599 -609 .
  The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice Gastroenterology 141 599 609
  )| false
• Search Google Scholar
• Bin-Nun, A., Bromiker, R., Wilschanski, M., Kaplan, M., Rudensky, B., Caplan, M. and Hammerman, C., 2005. Oral probiotics prevent necrotizing enterocolitis in very low birth weight neonates. Journal of Pediatrics 147: 192-196.
  'Oral probiotics prevent necrotizing enterocolitis in very low birth weight neonates ' () 147 _Journal of Pediatrics : 192 -196 .
  Oral probiotics prevent necrotizing enterocolitis in very low birth weight neonates Journal of Pediatrics 147 192 196
  )| false
• Search Google Scholar
• Blaut, M., 2012. Ecology and physiology of the intestinal tract. Current Topics in Microbiology and Immunology, in press. DOI: http://dx.doi.org/10.1007/82\_2011\_192.
• Bolte, E.R., 1998. Autism and Clostridium tetani. Medical Hypotheses 51: 133-144.
  'Autism and Clostridium tetani ' () 51 _Medical Hypotheses : 133 -144 .
  Autism and Clostridium tetani Medical Hypotheses 51 133 144
  )| false
• Search Google Scholar
• Borody, T.J. and Campbell, J., 2011. Fecal microbiota transplantation: current status and future directions. Expert Reviews in Gastroenterology and Hepatology 5: 653-655.
  'Fecal microbiota transplantation: current status and future directions ' () 5 _Expert Reviews in Gastroenterology and Hepatology : 653 -655 .
  Fecal microbiota transplantation: current status and future directions Expert Reviews in Gastroenterology and Hepatology 5 653 655
  )| false
• Search Google Scholar
• Borody, T.J. and Khoruts, A., 2012. Fecal microbiota transplantation and emerging applications. Nature Reviews Gastroenterology and Hepatology 9: 88-96.
  'Fecal microbiota transplantation and emerging applications ' () 9 _Nature Reviews Gastroenterology and Hepatology : 88 -96 .
  Fecal microbiota transplantation and emerging applications Nature Reviews Gastroenterology and Hepatology 9 88 96
  )| false
• Search Google Scholar
• Borody, T.J., Warren, E.F., Leis, S., Surace, R. and Ashman, O., 2003. Treatment of ulcerative colitis using fecal bacteriotherapy. Journal of Clinical Gastroenterology 37: 42-47.
  'Treatment of ulcerative colitis using fecal bacteriotherapy ' () 37 _Journal of Clinical Gastroenterology : 42 -47 .
  Treatment of ulcerative colitis using fecal bacteriotherapy Journal of Clinical Gastroenterology 37 42 47
  )| false
• Search Google Scholar
• Bravo, J.A., Forsythe, P., Chew, M.V., Escaravage, E., Savignac, H.M., Dinan, T.G., Bienenstock, J. and Cryan, J.F., 2011. Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve. Proceedings of the National Academy of Sciences of the USA 108: 16050-16055.
  'Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve ' () 108 _Proceedings of the National Academy of Sciences of the USA : 16050 -16055 .
  Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve Proceedings of the National Academy of Sciences of the USA 108 16050 16055
  )| false
• Search Google Scholar
• Caplan, M.S., Miller-Catchpole, R., Kaup, S., Russell, T., Lickerman, M., Amer, M., Xiao, Y. and Thomson Jr., R., 1999. Bifidobacterial supplementation reduces the incidence of necrotizing enterocolitis in a neonatal rat model. Gastroenterology 117: 577-583.
  'Bifidobacterial supplementation reduces the incidence of necrotizing enterocolitis in a neonatal rat model ' () 117 _Gastroenterology : 577 -583 .
  Bifidobacterial supplementation reduces the incidence of necrotizing enterocolitis in a neonatal rat model Gastroenterology 117 577 583
  )| false
• Search Google Scholar
• Chang, J.Y., Antonopoulos, D.A., Kalra, A., Tonelli, A., Khalife, W.T., Schmidt, T.M. and Young, V.B., 2008. Decreased diversity of the fecal microbiome in recurrent _Clostridium difficile_-associated diarrhea. Journal of Infectious Diseases 197: 435-438.
  'Decreased diversity of the fecal microbiome in recurrent Clostridium difficile-associated diarrhea ' () 197 _Journal of Infectious Diseases : 435 -438 .
  Decreased diversity of the fecal microbiome in recurrent Clostridium difficile-associated diarrhea Journal of Infectious Diseases 197 435 438
  )| false
• Search Google Scholar
• Claud, E.C. and Walker, W.A., 2001. Hypothesis: inappropriate colonization of the premature intestine can cause neonatal necrotizing enterocolitis. The FASEB Journal 15: 1398-1403.
  'Hypothesis: inappropriate colonization of the premature intestine can cause neonatal necrotizing enterocolitis ' () 15 _The FASEB Journal : 1398 -1403 .
  Hypothesis: inappropriate colonization of the premature intestine can cause neonatal necrotizing enterocolitis The FASEB Journal 15 1398 1403
  )| false
• Search Google Scholar
• Claud, E.C., Zhang, X., Petrof, E.O. and Sun, J., 2007. Developmentally regulated tumor necrosis factor-alpha induced nuclear factor-kappaB activation in intestinal epithelium. American Journal of Physiology - Gastrointestinal and Liver Physiology 292: G1411-G1419.
  'Developmentally regulated tumor necrosis factor-alpha induced nuclear factor-kappaB activation in intestinal epithelium ' () 292 _American Journal of Physiology - Gastrointestinal and Liver Physiology : G1411 -G1419 .
  Developmentally regulated tumor necrosis factor-alpha induced nuclear factor-kappaB activation in intestinal epithelium American Journal of Physiology - Gastrointestinal and Liver Physiology 292 G1411 G1419
  )| false
• Search Google Scholar
• Clayton, T.A., 2012. Metabolic differences underlying two distinct rat urinary phenotypes, a suggested role for gut microbial metabolism of phenylalanine and a possible connection to autism. FEBS Letters 586: 956-961.
  'Metabolic differences underlying two distinct rat urinary phenotypes, a suggested role for gut microbial metabolism of phenylalanine and a possible connection to autism ' () 586 _FEBS Letters : 956 -961 .
  Metabolic differences underlying two distinct rat urinary phenotypes, a suggested role for gut microbial metabolism of phenylalanine and a possible connection to autism FEBS Letters 586 956 961
  )| false
• Search Google Scholar
• Cotten, C.M., Taylor, S., Stoll, B., Goldberg, R.N., Hansen, N.I., Sanchez, P.J., Ambalavanan, N. and Benjamin Jr., D.K., 2009. Prolonged duration of initial empirical antibiotic treatment is associated with increased rates of necrotizing enterocolitis and death for extremely low birth weight infants. Pediatrics 123: 58-66.
  'Prolonged duration of initial empirical antibiotic treatment is associated with increased rates of necrotizing enterocolitis and death for extremely low birth weight infants ' () 123 _Pediatrics : 58 -66 .
  Prolonged duration of initial empirical antibiotic treatment is associated with increased rates of necrotizing enterocolitis and death for extremely low birth weight infants Pediatrics 123 58 66
  )| false
• Search Google Scholar
• Duncan, S.H., Lobley, G.E., Holtrop, G., Ince, J., Johnstone, A.M., Louis, P. and Flint, H.J., 2008. Human colonic microbiota associated with diet, obesity and weight loss. International Journal of Obesity 32: 1720-1724.
  'Human colonic microbiota associated with diet, obesity and weight loss ' () 32 _International Journal of Obesity : 1720 -1724 .
  Human colonic microbiota associated with diet, obesity and weight loss International Journal of Obesity 32 1720 1724
  )| false
• Search Google Scholar
• Duncan, S.H., Louis, P. and Flint, H.J., 2007. Cultivable bacterial diversity from the human colon. Letters in Applied Microbiology 44: 343-350.
  'Cultivable bacterial diversity from the human colon ' () 44 _Letters in Applied Microbiology : 343 -350 .
  Cultivable bacterial diversity from the human colon Letters in Applied Microbiology 44 343 350
  )| false
• Search Google Scholar
• Eckburg, P.B., Bik, E.M., Bernstein, C.N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S.R., Nelson, K.E. and Relman, D.A., 2005. Diversity of the human intestinal microbial flora. Science 308: 1635-1638.
  'Diversity of the human intestinal microbial flora ' () 308 _Science : 1635 -1638 .
  Diversity of the human intestinal microbial flora Science 308 1635 1638
  )| false
• Search Google Scholar
• Eiseman, B., Silen, W., Bascom, G.S. and Kauvar, A.J., 1958. Fecal enema as an adjunct in the treatment of pseudomembranous enterocolitis. Surgery 44: 854-859.
  'Fecal enema as an adjunct in the treatment of pseudomembranous enterocolitis ' () 44 _Surgery : 854 -859 .
  Fecal enema as an adjunct in the treatment of pseudomembranous enterocolitis Surgery 44 854 859
  )| false
• Search Google Scholar
• Finegold, S.M., 2011a. Desulfovibrio species are potentially important in regressive autism. Medical Hypotheses 77: 270-274.
  'Desulfovibrio species are potentially important in regressive autism ' () 77 _Medical Hypotheses : 270 -274 .
  Desulfovibrio species are potentially important in regressive autism Medical Hypotheses 77 270 274
  )| false
• Search Google Scholar
• Finegold, S.M., 2011b. State of the art; microbiology in health and disease. Intestinal bacterial flora in autism. Anaerobe 17: 367-368.
  'State of the art; microbiology in health and disease. Intestinal bacterial flora in autism ' () 17 _Anaerobe : 367 -368 .
  State of the art; microbiology in health and disease. Intestinal bacterial flora in autism Anaerobe 17 367 368
  )| false
• Search Google Scholar
• Finegold, S.M., Dowd, S.E., Gontcharova, V., Liu, C., Henley, K.E., Wolcott, R.D., Youn, E., Summanen, P.H., Granpeesheh, D., Dixon, D., Liu, M., Molitoris, D.R. and Green 3rd, J.A., 2010. Pyrosequencing study of fecal microbiota of autistic and control children. Anaerobe 16: 444-453.
  'Pyrosequencing study of fecal microbiota of autistic and control children ' () 16 _Anaerobe : 444 -453 .
  Pyrosequencing study of fecal microbiota of autistic and control children Anaerobe 16 444 453
  )| false
• Search Google Scholar
• Finegold, S.M., Downes, J. and Summanen, P.H., 2012. Microbiology of regressive autism. Anaerobe 18: 260-262.
  'Microbiology of regressive autism ' () 18 _Anaerobe : 260 -262 .
  Microbiology of regressive autism Anaerobe 18 260 262
  )| false
• Search Google Scholar
• Flint, H.J., Duncan, S.H., Scott, K.P. and Louis, P., 2007. Interactions and competition within the microbial community of the human colon: links between diet and health. Environmental Microbiology 9: 1101-1111.
  'Interactions and competition within the microbial community of the human colon: links between diet and health ' () 9 _Environmental Microbiology : 1101 -1111 .
  Interactions and competition within the microbial community of the human colon: links between diet and health Environmental Microbiology 9 1101 1111
  )| false
• Search Google Scholar
• Forsythe, P. and Kunze, W.A., 2012. Voices from within: gut microbes and the CNS. Cellular and Molecular Life Sciences, in press. DOI: http://dx.doi.org/10.1007/s00018-012-1028-z.
• Frazier, T.H., DiBaise, J.K. and McClain, C.J., 2011. Gut microbiota, intestinal permeability, obesity-induced inflammation, and liver injury. Journal of Parenteral and Enteral Nutrition 35: 14S-20S.
  'Gut microbiota, intestinal permeability, obesity-induced inflammation, and liver injury ' () 35 _Journal of Parenteral and Enteral Nutrition : 14S -20S .
  Gut microbiota, intestinal permeability, obesity-induced inflammation, and liver injury Journal of Parenteral and Enteral Nutrition 35 14S 20S
  )| false
• Search Google Scholar
• Gareau, M.G., Wine, E., Rodrigues, D.M., Cho, J.H., Whary, M.T., Philpott, D.J., Macqueen, G. and Sherman, P.M., 2011. Bacterial infection causes stress-induced memory dysfunction in mice. Gut 60: 307-317.
  'Bacterial infection causes stress-induced memory dysfunction in mice ' () 60 _Gut : 307 -317 .
  Bacterial infection causes stress-induced memory dysfunction in mice Gut 60 307 317
  )| false
• Search Google Scholar
• Gerding, D.N., Muto, C.A. and Owens Jr., R.C., 2008. Measures to control and prevent Clostridium difficile infection. Clinical Infectious Diseases 46 Suppl. 1: S43-S49.
  'Measures to control and prevent Clostridium difficile infection ' () 46 _Clinical Infectious Diseases : S43 -S49 .
  Measures to control and prevent Clostridium difficile infection Clinical Infectious Diseases 46 S43 S49
  )| false
• Search Google Scholar
• Goldmann, D.A., Leclair, J. and Macone, A., 1978. Bacterial colonization of neonates admitted to an intensive care environment. Journal of Pediatrics 93: 288-293.
  'Bacterial colonization of neonates admitted to an intensive care environment ' () 93 _Journal of Pediatrics : 288 -293 .
  Bacterial colonization of neonates admitted to an intensive care environment Journal of Pediatrics 93 288 293
  )| false
• Search Google Scholar
• Gosiewski, T., Strus, M., Fyderek, K., Kowalska-Duplaga, K., Wedrychowicz, A., Jedynak-Wasowicz, U., Sladek, M., Pieczarkowski, S., Adamski, P. and Heczko, P.B., 2012. Horizontal distribution of the fecal microbiota in adolescents with inflammatory bowel disease. Journal of Pediatric Gastroenterology and Nutrition 54: 20-27.
  'Horizontal distribution of the fecal microbiota in adolescents with inflammatory bowel disease ' () 54 _Journal of Pediatric Gastroenterology and Nutrition : 20 -27 .
  Horizontal distribution of the fecal microbiota in adolescents with inflammatory bowel disease Journal of Pediatric Gastroenterology and Nutrition 54 20 27
  )| false
• Search Google Scholar
• Gough, E., Shaikh, H. and Manges, A.R., 2011. Systematic review of intestinal microbiota transplantation (fecal bacteriotherapy) for recurrent Clostridium difficile infection. Clinical Infectious Diseases 53: 994-1002.
  'Systematic review of intestinal microbiota transplantation (fecal bacteriotherapy) for recurrent Clostridium difficile infection ' () 53 _Clinical Infectious Diseases : 994 -1002 .
  Systematic review of intestinal microbiota transplantation (fecal bacteriotherapy) for recurrent Clostridium difficile infection Clinical Infectious Diseases 53 994 1002
  )| false
• Search Google Scholar
• Greenblum, S., Turnbaugh, P.J. and Borenstein, E., 2012. Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease. Proceedings of the National Academy of Sciences of the USA 109: 594-599.
  'Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease ' () 109 _Proceedings of the National Academy of Sciences of the USA : 594 -599 .
  Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease Proceedings of the National Academy of Sciences of the USA 109 594 599
  )| false
• Search Google Scholar
• Guo, B., Harstall, C., Louie, T., Veldhuyzen van Zanten, S. and Dieleman, L.A., 2012. Systematic review: faecal transplantation for the treatment of _Clostridium difficile_-associated disease. Alimentary Pharmacology and Therapeutics 35: 865-875.
  'Systematic review: faecal transplantation for the treatment of Clostridium difficile-associated disease ' () 35 _Alimentary Pharmacology and Therapeutics : 865 -875 .
  Systematic review: faecal transplantation for the treatment of Clostridium difficile-associated disease Alimentary Pharmacology and Therapeutics 35 865 875
  )| false
• Search Google Scholar
• Harris, K., Kassis, A., Major, G. and Chou, C.J., 2012. Is the gut microbiota a new factor contributing to obesity and its metabolic disorders? Journal of Obesity 2012: 879151.
  'Is the gut microbiota a new factor contributing to obesity and its metabolic disorders? ' () 2012 _Journal of Obesity : 879151 .
  Is the gut microbiota a new factor contributing to obesity and its metabolic disorders? Journal of Obesity 2012 879151
  )| false
• Search Google Scholar
• Hold, G.L., Pryde, S.E., Russell, V.J., Furrie, E. and Flint, H.J., 2002. Assessment of microbial diversity in human colonic samples by 16S rDNA sequence analysis. FEMS Microbiology Ecology 39: 33-39.
  'Assessment of microbial diversity in human colonic samples by 16S rDNA sequence analysis ' () 39 _FEMS Microbiology Ecology : 33 -39 .
  Assessment of microbial diversity in human colonic samples by 16S rDNA sequence analysis FEMS Microbiology Ecology 39 33 39
  )| false
• Search Google Scholar
• Hoyos, A.B., 1999. Reduced incidence of necrotizing enterocolitis associated with enteral administration of Lactobacillus acidophilus and Bifidobacterium infantis to neonates in an intensive care unit. International Journal of Infectious Diseases 3: 197-202.
  'Reduced incidence of necrotizing enterocolitis associated with enteral administration of Lactobacillus acidophilus and Bifidobacterium infantis to neonates in an intensive care unit ' () 3 _International Journal of Infectious Diseases : 197 -202 .
  Reduced incidence of necrotizing enterocolitis associated with enteral administration of Lactobacillus acidophilus and Bifidobacterium infantis to neonates in an intensive care unit International Journal of Infectious Diseases 3 197 202
  )| false
• Search Google Scholar
• Huebner, E.S. and Surawicz, C.M., 2006. Treatment of recurrent Clostridium difficile diarrhea. Gastroenterology and Hepatology 2: 203-208.
  'Treatment of recurrent Clostridium difficile diarrhea ' () 2 _Gastroenterology and Hepatology : 203 -208 .
  Treatment of recurrent Clostridium difficile diarrhea Gastroenterology and Hepatology 2 203 208
  )| false
• Search Google Scholar
• Jumpertz, R., Le, D.S., Turnbaugh, P.J., Trinidad, C., Bogardus, C., Gordon, J.I. and Krakoff, J., 2011. Energy-balance studies reveal associations between gut microbes, caloric load, and nutrient absorption in humans. The American Journal of Clinical Nutrition 94: 58-65.
  'Energy-balance studies reveal associations between gut microbes, caloric load, and nutrient absorption in humans ' () 94 _The American Journal of Clinical Nutrition : 58 -65 .
  Energy-balance studies reveal associations between gut microbes, caloric load, and nutrient absorption in humans The American Journal of Clinical Nutrition 94 58 65
  )| false
• Search Google Scholar
• Kaplan, J.L. and Walker, W.A., 2012. Early gut colonization and subsequent obesity risk. Current Opinion in Clinical Nutrition and Metabolic Care 15: 278-284.
  'Early gut colonization and subsequent obesity risk ' () 15 _Current Opinion in Clinical Nutrition and Metabolic Care : 278 -284 .
  Early gut colonization and subsequent obesity risk Current Opinion in Clinical Nutrition and Metabolic Care 15 278 284
  )| false
• Search Google Scholar
• Kassam, Z., Hundal, R., Marshall, J.K. and Lee, C.H., 2012. Fecal transplant via retention enema for refractory or recurrent Clostridium difficile infection. Archives of Internal Medicine 172: 191-193.
  'Fecal transplant via retention enema for refractory or recurrent Clostridium difficile infection ' () 172 _Archives of Internal Medicine : 191 -193 .
  Fecal transplant via retention enema for refractory or recurrent Clostridium difficile infection Archives of Internal Medicine 172 191 193
  )| false
• Search Google Scholar
• Kenyon, S.L., Taylor, D.J. and Tarnow-Mordi, W., 2001. Broad-spectrum antibiotics for spontaneous preterm labour: the ORACLE II randomised trial. ORACLE Collaborative Group. The Lancet 357: 989-994.
  'Broad-spectrum antibiotics for spontaneous preterm labour: the ORACLE II randomised trial. ORACLE Collaborative Group ' () 357 _The Lancet : 989 -994 .
  Broad-spectrum antibiotics for spontaneous preterm labour: the ORACLE II randomised trial. ORACLE Collaborative Group The Lancet 357 989 994
  )| false
• Search Google Scholar
• Khailova, L., Dvorak, K., Arganbright, K.M., Halpern, M.D., Kinouchi, T., Yajima, M. and Dvorak, B., 2009. Bifidobacterium bifidum improves intestinal integrity in a rat model of necrotizing enterocolitis. American Journal of Physiology - Gastrointestinal and Liver Physiology 297: G940-G949.
  'Bifidobacterium bifidum improves intestinal integrity in a rat model of necrotizing enterocolitis ' () 297 _American Journal of Physiology - Gastrointestinal and Liver Physiology : G940 -G949 .
  Bifidobacterium bifidum improves intestinal integrity in a rat model of necrotizing enterocolitis American Journal of Physiology - Gastrointestinal and Liver Physiology 297 G940 G949
  )| false
• Search Google Scholar
• Khoruts, A., Dicksved, J., Jansson, J.K. and Sadowsky, M.J., 2010. Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent _Clostridium difficile_-associated diarrhea. Journal of Clinical Gastroenterology 44: 354-360.
  'Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea ' () 44 _Journal of Clinical Gastroenterology : 354 -360 .
  Changes in the composition of the human fecal microbiome after bacteriotherapy for recurrent Clostridium difficile-associated diarrhea Journal of Clinical Gastroenterology 44 354 360
  )| false
• Search Google Scholar
• Kim, Y.G., Graham, D.Y. and Jang, B.I., 2012. Proton pump inhibitor use and recurrent _Clostridium difficile_-associated disease: a case-control analysis matched by propensity score. Journal of Clinical Gastroenterology 46: 397-400.
  'Proton pump inhibitor use and recurrent Clostridium difficile-associated disease: a case-control analysis matched by propensity score ' () 46 _Journal of Clinical Gastroenterology : 397 -400 .
  Proton pump inhibitor use and recurrent Clostridium difficile-associated disease: a case-control analysis matched by propensity score Journal of Clinical Gastroenterology 46 397 400
  )| false
• Search Google Scholar
• Kosloske, A.M., 1994. Epidemiology of necrotizing enterocolitis. Acta Paediatrica. Suppl. 396: 2-7.
  'Epidemiology of necrotizing enterocolitis ' () 396 _Acta Paediatrica : 2 -7 .
  Epidemiology of necrotizing enterocolitis Acta Paediatrica 396 2 7
  )| false
• Search Google Scholar
• Lemons, J.A., Bauer, C.R., Oh, W., Korones, S.B., Papile, L.A., Stoll, B.J., Verter, J., Temprosa, M., Wright, L.L., Ehrenkranz, R.A., Fanaroff, A.A., Stark, A., Carlo, W., Tyson, J.E., Donovan, E.F., Shankaran, S. and Stevenson, D.K., 2001. Very low birth weight outcomes of the National Institute of Child Health and Human Development Neonatal Research N etwork, January 1995 through December 1996. NICHD Neonatal Research Network. Pediatrics 107: E1.
• Lepage, P., Hasler, R., Spehlmann, M.E., Rehman, A., Zvirbliene, A., Begun, A., Ott, S., Kupcinskas, L., Dore, J., Raedler, A. and Schreiber, S., 2011. Twin study indicates loss of interaction between microbiota and mucosa of patients with ulcerative colitis. Gastroenterology 141: 227-236.
  'Twin study indicates loss of interaction between microbiota and mucosa of patients with ulcerative colitis ' () 141 _Gastroenterology : 227 -236 .
  Twin study indicates loss of interaction between microbiota and mucosa of patients with ulcerative colitis Gastroenterology 141 227 236
  )| false
• Search Google Scholar
• Ley, R.E., Backhed, F., Turnbaugh, P., Lozupone, C.A., Knight, R.D. and Gordon, J.I., 2005. Obesity alters gut microbial ecology. Proceedings of the National Academy of Sciences of the USA 102: 11070-11075.
  'Obesity alters gut microbial ecology ' () 102 _Proceedings of the National Academy of Sciences of the USA : 11070 -11075 .
  Obesity alters gut microbial ecology Proceedings of the National Academy of Sciences of the USA 102 11070 11075
  )| false
• Search Google Scholar
• Ley, R.E., Peterson, D.A. and Gordon, J.I., 2006a. Ecological and evolutionary forces shaping microbial diversity in the human intestine. Cell 124: 837-848.
  'Ecological and evolutionary forces shaping microbial diversity in the human intestine ' () 124 _Cell : 837 -848 .
  Ecological and evolutionary forces shaping microbial diversity in the human intestine Cell 124 837 848
  )| false
• Search Google Scholar
• Ley, R.E., Turnbaugh, P.J., Klein, S. and Gordon, J.I., 2006b. Microbial ecology: human gut microbes associated with obesity. Nature 444: 1022-1023.
  'Microbial ecology: human gut microbes associated with obesity ' () 444 _Nature : 1022 -1023 .
  Microbial ecology: human gut microbes associated with obesity Nature 444 1022 1023
  )| false
• Search Google Scholar
• Lin, H.C., Hsu, C.H., Chen, H.L., Chung, M.Y., Hsu, J.F., Lien, R.I., Tsao, L.Y., Chen, C.H. and Su, B.H., 2008. Oral probiotics prevent necrotizing enterocolitis in very low birth weight preterm infants: a multicenter, randomized, controlled trial. Pediatrics 122: 693-700.
  'Oral probiotics prevent necrotizing enterocolitis in very low birth weight preterm infants: a multicenter, randomized, controlled trial ' () 122 _Pediatrics : 693 -700 .
  Oral probiotics prevent necrotizing enterocolitis in very low birth weight preterm infants: a multicenter, randomized, controlled trial Pediatrics 122 693 700
  )| false
• Search Google Scholar
• Lin, H.C., Su, B.H., Chen, A.C., Lin, T.W., Tsai, C.H., Yeh, T.F. and Oh, W., 2005. Oral probiotics reduce the incidence and severity of necrotizing enterocolitis in very low birth weight infants. Pediatrics 115: 1-4.
  'Oral probiotics reduce the incidence and severity of necrotizing enterocolitis in very low birth weight infants ' () 115 _Pediatrics : 1 -4 .
  Oral probiotics reduce the incidence and severity of necrotizing enterocolitis in very low birth weight infants Pediatrics 115 1 4
  )| false
• Search Google Scholar
• Lucke, K., Miehlke, S., Jacobs, E. and Schuppler, M., 2006. Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis. Journal of Medical Microbiology 55: 617-624.
  'Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis ' () 55 _Journal of Medical Microbiology : 617 -624 .
  Prevalence of Bacteroides and Prevotella spp. in ulcerative colitis Journal of Medical Microbiology 55 617 624
  )| false
• Search Google Scholar
• MacFabe, D.F., Cain, N.E., Boon, F., Ossenkopp, K.P. and Cain, D.P., 2011. Effects of the enteric bacterial metabolic product propionic acid on object-directed behavior, social behavior, cognition, and neuroinflammation in adolescent rats: relevance to autism spectrum disorder. Behavioural Brain Research 217: 47-54.
  'Effects of the enteric bacterial metabolic product propionic acid on object-directed behavior, social behavior, cognition, and neuroinflammation in adolescent rats: relevance to autism spectrum disorder ' () 217 _Behavioural Brain Research : 47 -54 .
  Effects of the enteric bacterial metabolic product propionic acid on object-directed behavior, social behavior, cognition, and neuroinflammation in adolescent rats: relevance to autism spectrum disorder Behavioural Brain Research 217 47 54
  )| false
• Search Google Scholar
• MacKendrick, W. and Caplan, M., 1993. Necrotizing enterocolitis. New thoughts about pathogenesis and potential treatments. Pediatric Clinics of North America 40: 1047-1059.
  'Necrotizing enterocolitis. New thoughts about pathogenesis and potential treatments ' () 40 _Pediatric Clinics of North America : 1047 -1059 .
  Necrotizing enterocolitis. New thoughts about pathogenesis and potential treatments Pediatric Clinics of North America 40 1047 1059
  )| false
• Search Google Scholar
• Michail, S., Durbin, M., Turner, D., Griffiths, A.M., Mack, D.R., Hyams, J., Leleiko, N., Kenche, H., Stolfi, A. and Wine, E., 2011. Alterations in the gut microbiome of children with severe ulcerative colitis. Inflammatory Bowel Diseases, in press. DOI: http://dx.doi.org/10.1002/ibd.22860.
• Millar, M.R., MacKay, P., Levene, M., Langdale, V. and Martin, C., 1992. Enterobacteriaceae and neonatal necrotising enterocolitis. Archives of Disease in Childhood 67: 53-56.
  'Enterobacteriaceae and neonatal necrotising enterocolitis ' () 67 _Archives of Disease in Childhood : 53 -56 .
  Enterobacteriaceae and neonatal necrotising enterocolitis Archives of Disease in Childhood 67 53 56
  )| false
• Search Google Scholar
• Nemoto, H., Kataoka, K., Ishikawa, H., Ikata, K., Arimochi, H., Iwasaki, T., Ohnishi, Y., Kuwahara, T. and Yasutomo, K., 2012. Reduced diversity and imbalance of fecal microbiota in patients with ulcerative colitis. Digestive Diseases and Sciences, in press. DOI: http://dx.doi.org/10.1007/s10620-012-2236-y.
• Noor, S.O., Ridgway, K., Scovell, L., Kemsley, E.K., Lund, E.K., Jamieson, C., Johnson, I.T. and Narbad, A., 2010. Ulcerative colitis and irritable bowel patients exhibit distinct abnormalities of the gut microbiota. BMC Gastroenterology 10: 134.
  'Ulcerative colitis and irritable bowel patients exhibit distinct abnormalities of the gut microbiota ' () 10 _BMC Gastroenterology : 134 .
  Ulcerative colitis and irritable bowel patients exhibit distinct abnormalities of the gut microbiota BMC Gastroenterology 10 134
  )| false
• Search Google Scholar
• Overturf, G.D., Sherman, M.P., Scheifele, D.W. and Wong, L.C., 1990. Neonatal necrotizing enterocolitis associated with delta toxin-producing methicillin-resistant Staphylococcus aureus. Pediatric Infectious Disease Journal 9: 88-91.
  'Neonatal necrotizing enterocolitis associated with delta toxin-producing methicillin-resistant Staphylococcus aureus ' () 9 _Pediatric Infectious Disease Journal : 88 -91 .
  Neonatal necrotizing enterocolitis associated with delta toxin-producing methicillin-resistant Staphylococcus aureus Pediatric Infectious Disease Journal 9 88 91
  )| false
• Search Google Scholar
• Parracho, H.M., Bingham, M.O., Gibson, G.R. and McCartney, A.L., 2005. Differences between the gut microflora of children with autistic spectrum disorders and that of healthy children. Journal of Medical Microbiology 54: 987-991.
  'Differences between the gut microflora of children with autistic spectrum disorders and that of healthy children ' () 54 _Journal of Medical Microbiology : 987 -991 .
  Differences between the gut microflora of children with autistic spectrum disorders and that of healthy children Journal of Medical Microbiology 54 987 991
  )| false
• Search Google Scholar
• Pennesi, C.M. and Klein, L.C., 2012. Effectiveness of the gluten-free, casein-free diet for children diagnosed with autism spectrum disorder: based on parental report. Nutritional Neuroscience 15: 85-91.
  'Effectiveness of the gluten-free, casein-free diet for children diagnosed with autism spectrum disorder: based on parental report ' () 15 _Nutritional Neuroscience : 85 -91 .
  Effectiveness of the gluten-free, casein-free diet for children diagnosed with autism spectrum disorder: based on parental report Nutritional Neuroscience 15 85 91
  )| false
• Search Google Scholar
• Petrof, E.O., Gloor, G.B., Vanner, S.J., Weese, J.S., Carter, D., Daigneault, M.C., Brown, E.M., Schroeter, K. and Allen-Vercoe, E., in press. Stool substitute transplant therapy for the eradication of C. difficile infection: RePOOPulating the gut. Microbiome, in press.
• Potter, V.A. and Aravinthan, A., 2012. Identifying patients at risk of severe _Clostridium difficile_-associated disease. British Journal of Hospital Medicine 73: 265-270.
  'Identifying patients at risk of severe Clostridium difficile-associated disease ' () 73 _British Journal of Hospital Medicine : 265 -270 .
  Identifying patients at risk of severe Clostridium difficile-associated disease British Journal of Hospital Medicine 73 265 270
  )| false
• Search Google Scholar
• Qin, J., Li, R., Raes, J., Arumugam, M., Burgdorf, K.S., Manichanh, C., Nielsen, T., Pons, N., Levenez, F., Yamada, T., Mende, D.R., Li, J., Xu, J., Li, S., Li, D., Cao, J., Wang, B., Liang, H., Zheng, H., Xie, Y., Tap, J., Lepage, P., Bertalan, M., Batto, J.M., Hansen, T., Le Paslier, D., Linneberg, A., Nielsen, H.B., Pelletier, E., Renault, P., Sicheritz-Ponten, T., Turner, K., Zhu, H., Yu, C., Jian, M., Zhou, Y., Li, Y., Zhang, X., Qin, N., Yang, H., Wang, J., Brunak, S., Dore, J., Guarner, F., Kristiansen, K., Pedersen, O., Parkhill, J., Weissenbach, J., Bork, P. and Ehrlich, S.D., 2010. A human gut microbial gene catalogue established by metagenomic sequencing. Nature 464: 59-65.
  'A human gut microbial gene catalogue established by metagenomic sequencing ' () 464 _Nature : 59 -65 .
  A human gut microbial gene catalogue established by metagenomic sequencing Nature 464 59 65
  )| false
• Search Google Scholar
• Rayyis, S.F., Ambalavanan, N., Wright, L. and Carlo, W.A., 1999. Randomized trial of ‘slow’ versus ‘fast’ feed advancements on the incidence of necrotizing enterocolitis in very low birth weight infants. Journal of Pediatrics 134: 293-297.
  'Randomized trial of ‘slow’ versus ‘fast’ feed advancements on the incidence of necrotizing enterocolitis in very low birth weight infants ' () 134 _Journal of Pediatrics : 293 -297 .
  Randomized trial of ‘slow’ versus ‘fast’ feed advancements on the incidence of necrotizing enterocolitis in very low birth weight infants Journal of Pediatrics 134 293 297
  )| false
• Search Google Scholar
• Reeves, A.E., Theriot, C.M., Bergin, I.L., Huffnagle, G.B., Schloss, P.D. and Young, V.B., 2011. The interplay between microbiome dynamics and pathogen dynamics in a murine model of Clostridium difficile infection. Gut Microbes 2: 145-158.
  'The interplay between microbiome dynamics and pathogen dynamics in a murine model of Clostridium difficile infection ' () 2 _Gut Microbes : 145 -158 .
  The interplay between microbiome dynamics and pathogen dynamics in a murine model of Clostridium difficile infection Gut Microbes 2 145 158
  )| false
• Search Google Scholar
• Reichelt, K.L. and Knivsberg, A.M., 2009. The possibility and probability of a gut-to-brain connection in autism. Annals of Clinical Psychiatry 21: 205-211.
  'The possibility and probability of a gut-to-brain connection in autism ' () 21 _Annals of Clinical Psychiatry : 205 -211 .
  The possibility and probability of a gut-to-brain connection in autism Annals of Clinical Psychiatry 21 205 211
  )| false
• Search Google Scholar
• Rolfe, R.D., 1984. Role of volatile fatty acids in colonization resistance to Clostridium difficile. Infection and Immunity 45: 185-191.
  'Role of volatile fatty acids in colonization resistance to Clostridium difficile ' () 45 _Infection and Immunity : 185 -191 .
  Role of volatile fatty acids in colonization resistance to Clostridium difficile Infection and Immunity 45 185 191
  )| false
• Search Google Scholar
• Sandler, R.H., Finegold, S.M., Bolte, E.R., Buchanan, C.P., Maxwell, A.P., Vaisanen, M.L., Nelson, M.N. and Wexler, H.M., 2000. Short-term benefit from oral vancomycin treatment of regressive-onset autism. Journal of Child Neurology 15: 429-435.
  'Short-term benefit from oral vancomycin treatment of regressive-onset autism ' () 15 _Journal of Child Neurology : 429 -435 .
  Short-term benefit from oral vancomycin treatment of regressive-onset autism Journal of Child Neurology 15 429 435
  )| false
• Search Google Scholar
• Schwiertz, A., Gruhl, B., Lobnitz, M., Michel, P., Radke, M. and Blaut, M., 2003. Development of the intestinal bacterial composition in hospitalized preterm infants in comparison with breast-fed, full-term infants. Pediatric Research 54: 393-399.
  'Development of the intestinal bacterial composition in hospitalized preterm infants in comparison with breast-fed, full-term infants ' () 54 _Pediatric Research : 393 -399 .
  Development of the intestinal bacterial composition in hospitalized preterm infants in comparison with breast-fed, full-term infants Pediatric Research 54 393 399
  )| false
• Search Google Scholar
• Schwiertz, A., Taras, D., Schafer, K., Beijer, S., Bos, N.A., Donus, C. and Hardt, P.D., 2010. Microbiota and SCFA in lean and overweight healthy subjects. Obesity 18: 190-195.
  'Microbiota and SCFA in lean and overweight healthy subjects ' () 18 _Obesity : 190 -195 .
  Microbiota and SCFA in lean and overweight healthy subjects Obesity 18 190 195
  )| false
• Search Google Scholar
• Stecher, B. and Hardt, W.D., 2008. The role of microbiota in infectious disease. Trends in Microbiology 16: 107-114.
  'The role of microbiota in infectious disease ' () 16 _Trends in Microbiology : 107 -114 .
  The role of microbiota in infectious disease Trends in Microbiology 16 107 114
  )| false
• Search Google Scholar
• Stefanatos, G.A., 2008. Regression in autistic spectrum disorders. Neuropsychology Review 18: 305-319.
  'Regression in autistic spectrum disorders ' () 18 _Neuropsychology Review : 305 -319 .
  Regression in autistic spectrum disorders Neuropsychology Review 18 305 319
  )| false
• Search Google Scholar
• Stoll, B.J., Hansen, N.I., Bell, E.F., Shankaran, S., Laptook, A.R., Walsh, M.C., Hale, E.C., Newman, N.S., Schibler, K., Carlo, W.A., Kennedy, K.A., Poindexter, B.B., Finer, N.N., Ehrenkranz, R.A., Duara, S., Sanchez, P.J., O'Shea, T.M., Goldberg, R.N., Van Meurs, K.P., Faix, R.G., Phelps, D.L., Frantz III, I.D., Watterberg, K.L., Saha, S., Das, A. and Higgins, R.D., 2010. Neonatal outcomes of extremely preterm infants from the NICHD Neonatal Research Network. Pediatrics 126: 443-456.
  'Neonatal outcomes of extremely preterm infants from the NICHD Neonatal Research Network ' () 126 _Pediatrics : 443 -456 .
  Neonatal outcomes of extremely preterm infants from the NICHD Neonatal Research Network Pediatrics 126 443 456
  )| false
• Search Google Scholar
• Sturm, R., Staneck, J.L., Stauffer, L.R. and Neblett III, W.W., 1980. Neonatal necrotizing enterocolitis associated with penicillin-resistant, toxigenic Clostridium butyricum. Pediatrics 66: 928-931.
  'Neonatal necrotizing enterocolitis associated with penicillin-resistant, toxigenic Clostridium butyricum ' () 66 _Pediatrics : 928 -931 .
  Neonatal necrotizing enterocolitis associated with penicillin-resistant, toxigenic Clostridium butyricum Pediatrics 66 928 931
  )| false
• Search Google Scholar
• Suau, A., Bonnet, R., Sutren, M., Godon, J.J., Gibson, G.R., Collins, M.D. and Dore, J., 1999. Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut. Applied and Environmental Microbiology 65: 4799-4807.
  'Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut ' () 65 _Applied and Environmental Microbiology : 4799 -4807 .
  Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut Applied and Environmental Microbiology 65 4799 4807
  )| false
• Search Google Scholar
• Sudo, N., Chida, Y., Aiba, Y., Sonoda, J., Oyama, N., Yu, X.N., Kubo, C. and Koga, Y., 2004. Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice. Journal of Physiology 558: 263-275.
  'Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice ' () 558 _Journal of Physiology : 263 -275 .
  Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice Journal of Physiology 558 263 275
  )| false
• Search Google Scholar
• Talley, N.J., Abreu, M.T., Achkar, J.P., Bernstein, C.N., Dubinsky, M.C., Hanauer, S.B., Kane, S.V., Sandborn, W.J., Ullman, T.A. and Moayyedi, P., 2011. An evidence-based systematic review on medical therapies for inflammatory bowel disease. The American Journal of Gastroenterology 106 Suppl. 1: S2-25; quiz S26.
  'An evidence-based systematic review on medical therapies for inflammatory bowel disease ' () 106 _The American Journal of Gastroenterology : S2 -25 .
  An evidence-based systematic review on medical therapies for inflammatory bowel disease The American Journal of Gastroenterology 106 S2 25
  )| false
• Search Google Scholar
• The, H.M.P.C., 2012. Structure, function and diversity of the healthy human microbiome. Nature 486: 207-214.
• Thomas, R.H., Meeking, M.M., Mepham, J.R., Tichenoff, L., Possmayer, F., Liu, S. and MacFabe, D.F., 2012. The enteric bacterial metabolite propionic acid alters brain and plasma phospholipid molecular species: further development of a rodent model of autism spectrum disorders. Journal of Neuroinflammation 9: 153.
  'The enteric bacterial metabolite propionic acid alters brain and plasma phospholipid molecular species: further development of a rodent model of autism spectrum disorders ' () 9 _Journal of Neuroinflammation : 153 .
  The enteric bacterial metabolite propionic acid alters brain and plasma phospholipid molecular species: further development of a rodent model of autism spectrum disorders Journal of Neuroinflammation 9 153
  )| false
• Search Google Scholar
• Thompson, A.L., 2012. Developmental origins of obesity: early feeding environments, infant growth, and the intestinal microbiome. American Journal of Human Biology 24: 350-360.
  'Developmental origins of obesity: early feeding environments, infant growth, and the intestinal microbiome ' () 24 _American Journal of Human Biology : 350 -360 .
  Developmental origins of obesity: early feeding environments, infant growth, and the intestinal microbiome American Journal of Human Biology 24 350 360
  )| false
• Search Google Scholar
• Tsai, H.H., Dwarakanath, A.D., Hart, C.A., Milton, J.D. and Rhodes, J.M., 1995. Increased faecal mucin sulphatase activity in ulcerative colitis: a potential target for treatment. Gut 36: 570-576.
  'Increased faecal mucin sulphatase activity in ulcerative colitis: a potential target for treatment ' () 36 _Gut : 570 -576 .
  Increased faecal mucin sulphatase activity in ulcerative colitis: a potential target for treatment Gut 36 570 576
  )| false
• Search Google Scholar
• Tsai, H.H., Sunderland, D., Gibson, G.R., Hart, C.A. and Rhodes, J.M., 1992. A novel mucin sulphatase from human faeces: its identification, purification and characterization. Clinical Science 82: 447-454.
  'A novel mucin sulphatase from human faeces: its identification, purification and characterization ' () 82 _Clinical Science : 447 -454 .
  A novel mucin sulphatase from human faeces: its identification, purification and characterization Clinical Science 82 447 454
  )| false
• Search Google Scholar
• Turnbaugh, P.J., Hamady, M., Yatsunenko, T., Cantarel, B.L., Duncan, A., Ley, R.E., Sogin, M.L., Jones, W.J., Roe, B.A., Affourtit, J.P., Egholm, M., Henrissat, B., Heath, A.C., Knight, R. and Gordon, J.I., 2009. A core gut microbiome in obese and lean twins. Nature 457: 480-484.
  'A core gut microbiome in obese and lean twins ' () 457 _Nature : 480 -484 .
  A core gut microbiome in obese and lean twins Nature 457 480 484
  )| false
• Search Google Scholar
• Turnbaugh, P.J., Ley, R.E., Hamady, M., Fraser-Liggett, C.M., Knight, R. and Gordon, J.I., 2007. The human microbiome project. Nature 449: 804-810.
  'The human microbiome project ' () 449 _Nature : 804 -810 .
  The human microbiome project Nature 449 804 810
  )| false
• Search Google Scholar
• Turnbaugh, P.J., Ley, R.E., Mahowald, M.A., Magrini, V., Mardis, E.R. and Gordon, J.I., 2006. An obesity-associated gut microbiome with increased capacity for energy harvest. Nature 444: 1027-1031.
  'An obesity-associated gut microbiome with increased capacity for energy harvest ' () 444 _Nature : 1027 -1031 .
  An obesity-associated gut microbiome with increased capacity for energy harvest Nature 444 1027 1031
  )| false
• Search Google Scholar
• Tvede, M. and Rask-Madsen, J., 1989. Bacteriotherapy for chronic relapsing Clostridium difficile diarrhoea in six patients. The Lancet 333: 1156-1160.
  'Bacteriotherapy for chronic relapsing Clostridium difficile diarrhoea in six patients ' () 333 _The Lancet : 1156 -1160 .
  Bacteriotherapy for chronic relapsing Clostridium difficile diarrhoea in six patients The Lancet 333 1156 1160
  )| false
• Search Google Scholar
• Van den Abbeele, P., Van de Wiele, T., Verstraete, W. and Possemiers, S., 2011. The host selects mucosal and luminal associations of coevolved gut microorganisms: a novel concept. FEMS Microbiology Reviews 35: 681-704.
  'The host selects mucosal and luminal associations of coevolved gut microorganisms: a novel concept ' () 35 _FEMS Microbiology Reviews : 681 -704 .
  The host selects mucosal and luminal associations of coevolved gut microorganisms: a novel concept FEMS Microbiology Reviews 35 681 704
  )| false
• Search Google Scholar
• Vrieze, A., Van Nood, E., Holleman, F., Salojarvi, J., Kootte, R.S., Bartelsman, J.F., Dallinga-Thie, G.M., Ackermans, M.T., Serlie, M.J., Oozeer, R., Derrien, M., Druesne, A., Van Hylckama Vlieg, J.E., Bloks, V.W., Groen, A.K., Heilig, H.G., Zoetendal, E.G., Stroes, E.S., De Vos, W.M., Hoekstra, J.B. and Nieuwdorp, M., 2012. Transfer of intestinal microbiota from lean donors increases insulin sensitivity in subjects with metabolic syndrome. Gastroenterology, in press. DOI: http://dx.doi.org/10.1053/j.gastro.2012.06.031.
• Wagner, R.D., 2008. Effects of microbiota on GI health: gnotobiotic research. Advances in Experimental Medicine and Biology 635: 41-56.
  'Effects of microbiota on GI health: gnotobiotic research ' () 635 _Advances in Experimental Medicine and Biology : 41 -56 .
  Effects of microbiota on GI health: gnotobiotic research Advances in Experimental Medicine and Biology 635 41 56
  )| false
• Search Google Scholar
• Wang, L., Christophersen, C.T., Sorich, M.J., Gerber, J.P., Angley, M.T. and Conlon, M.A., 2011. Low relative abundances of the mucolytic bacterium Akkermansia muciniphila and Bifidobacterium spp. in feces of children with autism. Applied and Environmental Microbiology 77: 6718-6721.
  'Low relative abundances of the mucolytic bacterium Akkermansia muciniphila and Bifidobacterium spp. in feces of children with autism ' () 77 _Applied and Environmental Microbiology : 6718 -6721 .
  Low relative abundances of the mucolytic bacterium Akkermansia muciniphila and Bifidobacterium spp. in feces of children with autism Applied and Environmental Microbiology 77 6718 6721
  )| false
• Search Google Scholar
• Wang, Y., Hoenig, J.D., Malin, K.J., Qamar, S., Petrof, E.O., Sun, J., Antonopoulos, D.A., Chang, E.B. and Claud, E.C., 2009. 16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis. ISME Journal 3: 944-954.
  '16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis ' () 3 _ISME Journal : 944 -954 .
  16S rRNA gene-based analysis of fecal microbiota from preterm infants with and without necrotizing enterocolitis ISME Journal 3 944 954
  )| false
• Search Google Scholar
• Williams, B.L., Hornig, M., Parekh, T. and Lipkin, W.I., 2012. Application of novel PCR-based methods for detection, quantitation, and phylogenetic characterization of Sutterella species in intestinal biopsy samples from children with autism and gastrointestinal disturbances. mBio 3: e00261-11.
• Wright, D.P., Rosendale, D.I. and Robertson, A.M., 2000. Prevotella enzymes involved in mucin oligosaccharide degradation and evidence for a small operon of genes expressed during growth on mucin. FEMS Microbiology Letters 190: 73-79.
  'Prevotella enzymes involved in mucin oligosaccharide degradation and evidence for a small operon of genes expressed during growth on mucin ' () 190 _FEMS Microbiology Letters : 73 -79 .
  Prevotella enzymes involved in mucin oligosaccharide degradation and evidence for a small operon of genes expressed during growth on mucin FEMS Microbiology Letters 190 73 79
  )| false
• Search Google Scholar
• Wu, G.D., Chen, J., Hoffmann, C., Bittinger, K., Chen, Y.Y., Keilbaugh, S.A., Bewtra, M., Knights, D., Walters, W.A., Knight, R., Sinha, R., Gilroy, E., Gupta, K., Baldassano, R., Nessel, L., Li, H., Bushman, F.D. and Lewis, J.D., 2011. Linking long-term dietary patterns with gut microbial enterotypes. Science 334: 105-108.
  'Linking long-term dietary patterns with gut microbial enterotypes ' () 334 _Science : 105 -108 .
  Linking long-term dietary patterns with gut microbial enterotypes Science 334 105 108
  )| false
• Search Google Scholar
• Yap, I.K., Angley, M., Veselkov, K.A., Holmes, E., Lindon, J.C. and Nicholson, J.K., 2010. Urinary metabolic phenotyping differentiates children with autism from their unaffected siblings and age-matched controls. Journal of Proteome Research 9: 2996-3004.
  'Urinary metabolic phenotyping differentiates children with autism from their unaffected siblings and age-matched controls ' () 9 _Journal of Proteome Research : 2996 -3004 .
  Urinary metabolic phenotyping differentiates children with autism from their unaffected siblings and age-matched controls Journal of Proteome Research 9 2996 3004
  )| false
• Search Google Scholar