Transposable Elements for Transgenesis and Insertional Mutagenesis in Vertebrates (original) (raw)

References

  1. International Human Genome Sequencing Consortium. (2001) Initial sequencing and analysis of the human genome. Nature 409, 860–921.
    Article Google Scholar
  2. Driever, W., Solnica-Krezel, L., Schier, A., Neuhauss, S., Maliki, J., Stemple, D., et al. (1996) A genetic screen for mutations affecting embryogenesis in zebrafish. Development 123, 37–46.
    PubMed CAS Google Scholar
  3. Haffter, P., Granato, M., Brand, M., Mullins, M. C., Hammerschmidt, M., Kane, D. A., et al. (1996) The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio. Development 123, 1–36.
    PubMed CAS Google Scholar
  4. Verma, I. M. and Somia, N. (1997) Gene therapy—Promises, problems and prospects. Nature 389, 239–242.
    Article PubMed CAS Google Scholar
  5. Craig, N. L. (1995) Unity in transposition reactions. Science 270, 253–254.
    Article PubMed CAS Google Scholar
  6. Amsterdam, A., Burgess, S., Golling, G., Chen, W., Sun, Z., Townsend, K., et al. (1999) A large-scale insertional mutagenesis screen in zebrafish. Genes Dev. 13, 2713–2724.
    Article PubMed CAS Google Scholar
  7. Burns, J. C., Friedmann, T., Driever, W., Burrascano, M., and Yee, J. K. (1993) Vesicular stomatitis virus G glycoprotein pseudotyped retroviral vectors: concentration to very high titer and efficient gene transfer into mammalian and nonmammalian cells. Proc. Natl. Acad. Sci. USA 90, 8033–8037.
    Article PubMed CAS Google Scholar
  8. Lin, S., Gaiano, N., Culp, P., Burns, J. C., Friedmann, T., Yee, J. K., et al. (1994) Integration and germ-line transmission of a pseudotyped retroviral vector in zebrafish. Science 265, 666–669.
    Article PubMed CAS Google Scholar
  9. Gaiano, N., Amsterdam, A., Kawakami, K., Allende, M., Becker, T., and Hopkins, N. (1996) Insertional mutagenesis and rapid cloning of essential genes in zebrafish. Nature 383, 829–832.
    Article PubMed CAS Google Scholar
  10. Koga, A., Suzuki, M., Inagaki, H., Bessho, Y., and Hori, H. (1996) Transposable element in fish. Nature 383, 30.
    Article PubMed CAS Google Scholar
  11. Koga, A., Shimada, A., Shima, A., Sakaizumi, M., Tachida, H., and Hori, H. (2000) Evidence for recent invasion of the medaka fish genome by the _Tol_2 transposable element. Genetics 155, 273–281.
    PubMed CAS Google Scholar
  12. Kawakami, K., Shima, A., and Kawakami, N. (2000) Identification of a functional transposase of the _Tol_2 element, an _Ac_-like element from the japanese medaka fish, and its transposition in the zebrafish germ lineage. Proc. Natl. Acad. Sci. USA 97, 11,403–11,408.
    Article PubMed CAS Google Scholar
  13. Plasterk, R. H., Izsvák, Z., and Ivics, Z. (1999) Resident aliens: the Tc_1/mariner_ superfamily of transposable elements. Trends Genet. 15, 326–332.
    Article PubMed CAS Google Scholar
  14. Capy, P., Vitalis, R., Langin, T., Higuet, D., and Bazin, C. (1996) Relationships between transposable elements based upon the integrase-transposase domains: is there a common ancestor? J. Mol. Evol. 42, 359–368.
    Article PubMed CAS Google Scholar
  15. Robertson, H. M. (1995) The Tc_1-mariner_ superfamily of transposons in animals. J. Insect Physiol. 41, 99–105.
    Article CAS Google Scholar
  16. Rio, D. C., Barnes, G., Laski, F. A., Rine, J., and Rubin, G. M. (1988) Evidence for Drosophila P element transposase activity in mammalian cells and yeast. J. Mol. Biol. 200, 411–415.
    Article PubMed CAS Google Scholar
  17. Kidwell, M. G. (1992) Horizontal transfer of P elements and other short inverted repeat transposons. Genetica 86, 275–286.
    Article PubMed CAS Google Scholar
  18. Ivics, Z., Izsvák, Z., Minter, A., and Hackett, P. B. (1996) Identification of functional domains and evolution of Tc_1_-like transposable elements. Proc. Natl. Acad. Sci. USA 93, 5008–5013.
    Article PubMed CAS Google Scholar
  19. Vos, J. C., De Baere, I., and Plasterk, R. H. (1996) Transposase is the only nematode protein required for in vitro transposition of Tc_1_. Genes Dev. 10, 755–761.
    Article PubMed CAS Google Scholar
  20. Lampe, D. J., Churchill, M. E., and Robertson, H. M. (1996) A purified mariner transposase is sufficient to mediate transposition in vitro. EMBO J. 15, 5470–5479.
    PubMed CAS Google Scholar
  21. Schouten, G. J., van Luenen, H. G., Verra, N. C., Valerio, D., and Plasterk, R. H. (1998) Transposon Tc_1_ of the nematode Caenorhabditis elegans jumps in human cells. Nucleic Acids Res. 26, 3013–3017.
    Article PubMed CAS Google Scholar
  22. Zhang, L., Sankar, U., Lampe, D. J., Robertson, H. M., and Graham, F. L. (1998) The _Himar_1 mariner transposase cloned in a recombinant adenovirus vector is functional in mammalian cells. Nucleic Acids Res. 26, 3687–3693.
    Article PubMed CAS Google Scholar
  23. Fischer, S. E. J., Wienholds, E., and Plasterk, R. H. A. (2001) Regulated transposition of a fish transposon in the mouse germ line. Proc. Natl. Acad. Sci. USA 98, 6759–6764.
    Article PubMed CAS Google Scholar
  24. Klinakis, A. G., Zagoraiou, L., Vassilatis, D. K., and Savakis, C. (2000) Genome-wide insertional mutagenesis in human cells by the Drosophila mobile element Minos. EMBO Rep. 1, 416–421.
    Article PubMed CAS Google Scholar
  25. Fadool, J. M., Hartl, D. L., and Dowling, J. E. (1998) Transposition of the mariner element from Drosophila mauritiana in zebrafish. Proc. Natl. Acad. Sci. USA 95, 5182–5186.
    Article PubMed CAS Google Scholar
  26. Raz, E., van Luenen, H. G., Schaerringer, B., Plasterk, R. H. A., and Driever, W. (1998) Transposition of the nematode Caenorhabditis elegans Tc_3_ element in the zebrafish Danio rerio. Curr. Biol. 8, 82–88.
    Article PubMed CAS Google Scholar
  27. Sherman, A., Dawson, A., Mather, C., Gilhooley, H., Li, Y., Mitchell, R., et al. (1998) Transposition of the Drosophila element mariner into the chicken germ line. Nat. Biotechnol. 16, 1050–1053.
    Article PubMed CAS Google Scholar
  28. Radice, A. D., Bugaj, B., Fitch, D. H., and Emmons, S. W. (1994) Widespread occurrence of the Tc_1_ transposon family: Tc_1_-like transposons from teleost fish. Mol. Gen. Genet. 244, 606–612.
    Article PubMed CAS Google Scholar
  29. Goodier, J. L. and Davidson, W. S. (1994) Tc_1_ transposon-like sequences are widely distributed in salmonids. J. Mol. Biol. 241, 26–34.
    Article PubMed CAS Google Scholar
  30. Lam, W. L., Seo, P., Robison, K., Virk, S., and Gilbert, W. (1996) Discovery of amphibian Tc_1_-like transposon families. J. Mol. Biol. 257, 359–366.
    Article PubMed CAS Google Scholar
  31. Lam, W. L., Lee, T. S., and Gilbert, W. (1996) Active transposition in zebrafish. Proc. Natl. Acad. Sci. USA 93, 10,870–10,875.
    Article PubMed CAS Google Scholar
  32. Auge-Gouillou, C., Bigot, Y., Pollet, N., Hamelin, M. H., Meunier-Rotival, M., and Periquet, G. (1995) Human and other mammalian genomes contain transposons of the mariner family. FEBS Lett. 368, 541–546.
    Article PubMed CAS Google Scholar
  33. Morgan, G. T. (1995) Identification in the human genome of mobile elements spread by DNA-mediated transposition. J. Mol. Biol. 254, 1–5.
    Article PubMed CAS Google Scholar
  34. Oosumi, T., Belknap, W. R., and Garlick, B. (1995) Mariner transposons in humans. Nature 378, 672.
    Article PubMed CAS Google Scholar
  35. Ivics, Z., Hackett, P. B., Plasterk, R. H., and Izsvák, Z. (1997) Molecular reconstruction of Sleeping Beauty, a Tc_1_-like transposon from fish, and its transposition in human cells. Cell 91, 501–510.
    Article PubMed CAS Google Scholar
  36. Doak, T. G., Doerder, F. P., Jahn, C. L., and Herrick, G. (1994) A proposed super-family of transposase genes: transposon-like elements in ciliated protozoa and a common “D35E” motif. Proc. Natl. Acad. Sci. USA 91, 942–946.
    Article PubMed CAS Google Scholar
  37. Izsvák, Z., Ivics, Z., and Hackett, P. B. (1995) Characterization of a Tc_1_-like transposable element in zebrafish (Danio rerio). Mol. Gen. Genet. 247, 312–322.
    Article PubMed Google Scholar
  38. Izsvák, Z., Ivics, Z., and Plasterk, R. H. (2000) Sleeping Beauty, a wide hostrange transposon vector for genetic transformation in vertebrates. J. Mol. Biol. 302, 93–102.
    Article PubMed Google Scholar
  39. Yant, S. R., Meuse, L., Chiu, W., Ivics, Z., Izsvak, Z., and Kay, M. A. (2000) Somatic integration and long-term transgene expression in normal and haemophilic mice using a DNA transposon system. Nat. Genet. 25, 35–41.
    Article PubMed CAS Google Scholar
  40. Luo, G., Ivics, Z., Izsvák, Z., and Bradley, A. (1998) Chromosomal transposition of a Tc_1/mariner_-like element in mouse embryonic stem cells. Proc. Natl. Acad. Sci. USA 95, 10,769–10,773.
    Article PubMed CAS Google Scholar
  41. Montini, E., Held, P. K., Noll, M., Morcinek, N., Al-Dhalimy, M., Finegold, M., et al. (2002) In Vivo Correction of Murine Tyrosinemia Type I by DNA-Mediated Transposition. Mol. Ther. 6, 759–769.
    Article PubMed CAS Google Scholar
  42. Yant, S. R., Ehrhardt, A., Mikkelsen, J. G., Meuse, L., Pham, T., and Kay, M. A. (2002) Transposition from a gutless adeno-transposon vector stabilizes transgene expression in vivo. Nat. Biotechnol. 20, 999–1005.
    Article PubMed CAS Google Scholar
  43. Zagoraiou, L., Drabek, D., Alexaki, S., Guy, J. A., Klinakis, A. G., Langeveld, A., et al. (2001) In vivo transposition of Minos, a Drosophila mobile element, in mammalian tissues. Proc. Natl. Acad. Sci. USA 98, 11,474–11,478.
    Article PubMed CAS Google Scholar
  44. Nasevicius, A. and Ekker, S. C. (2000) Effective targeted gene “knockdown” in zebrafish. Nat. Genet. 26, 216–220.
    Article PubMed CAS Google Scholar
  45. Lavitrano, M., Camaioni, A., Fazio, V. M., Dolci, S., Farace, M. G., and Spadafora, C. (1989) Sperm cells as vectors for introducing foreign DNA into eggs: Genetic transformation of mice. Cell 57, 717–723.
    Article PubMed CAS Google Scholar
  46. Müller, F., Ivics, Z., Erdélyi, F., Papp, T., Váradi, L., Horváth, L., et al. (1992) Introducing foreign genes into fish eggs by electroporated sperm as a carrier. Mol. Marine Biol. Biotech. 1, 276–281.
    Google Scholar
  47. Kroll, K. L. and Amaya, E. (1996) Transgenic Xenopus embryos from sperm nuclear transplantations reveal FGF signaling requirements during gastrulation. Development 122, 3173–3183.
    PubMed CAS Google Scholar
  48. Dupuy, A. J., Fritz, S., and Largaespada, D. A. (2001) Transposition and gene disruption in the male germline of the mouse. Genesis 30, 82–88.
    Article PubMed CAS Google Scholar
  49. Horie, K., Kuroiwa, A., Ikawa, M., Okabe, M., Kondoh, G., Matsuda, Y., et al. (2001) Efficient chromosomal transposition of a Tc_1/mariner_-like transposon Sleeping Beauty in mice. Proc. Natl. Acad. Sci. USA 98, 9191–9196.
    Article PubMed CAS Google Scholar
  50. Scherdin, U., Rhodes, K., and Breindl, M. (1990) Transcriptionally active genome regions are preferred targets for retrovirus integration. J. Virol. 64, 907–912.
    PubMed CAS Google Scholar
  51. Bellen, H. J., O’Kane, C. J., Wilson, C., Grossniklaus, U., Pearson, R. K., and Gehring, W. J. (1989) _P_-element-mediated enhancer detection: a versatile method to study development in Drosophila. Genes Dev. 3, 1288–1300.
    Article PubMed CAS Google Scholar
  52. Spradling, A. C., Stern, D. M., Kiss, I., Roote, J., Laverty, T., and Rubin, G. M. (1995) Gene disruptions using P transposable elements: an integral component of the Drosophila genome project. Proc. Natl. Acad. Sci. USA 92, 10,824–10,830.
    Article PubMed CAS Google Scholar
  53. Vigdal, T. J., Kaufman, C. D., Izsvák, Z., Voytas, D. F., and Ivics, Z. (2002) Common physical properties of DNA affecting target site selection of Sleeping Beauty and other Tc_1/mariner_ transposable elements. J. Mol. Biol. 323, 441–452.
    Article PubMed CAS Google Scholar
  54. Bronchain, O. J., Hartley, K. O., and Amaya, E. (1999) A gene trap approach in Xenopus. Curr. Biol. 9, 1195–1198.
    Article PubMed CAS Google Scholar

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