Translations This category contains translations of the QIIME 2 documentation in different languages, developed and contributed by members of the QIIME 2 user community. The translated documentation should be considered supplemental to the primary documentation at https://docs.qiime2.org. If the translated documentation is popular, we may eventually work towards including it at https://docs.qiime2.org. Plugins The Community Plugins category is for sharing QIIME 2 plugins that are not part of a QIIME 2 Distribution. Data resources The Community Data Resources category is for sharing QIIME 2 resources, such as trained feature classifiers or reference databases, that are not listed on the QIIME 2 Data Resources page. These may be contributed by members of the QIIME 2 developer or user community, or by QIIME 2 developers who are not ready to include their resource on the QIIME 2 Data Resources page yet. Tutorials The Community Tutorials category is for sharing QIIME 2 tutorials that are not part of the official QIIME 2 documentation. These may be contributed by members of the QIIME 2 user community, or by plugin developers who are drafting new tutorials that may ultimately be included in the QIIME 2 documentation.
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| About the Community Contributions category Community Contributions |
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February 14, 2018 |
| pre-trained UNITE ITS classifiers for QIIME 2026.1 (and older!) Data resources feature-classifier , taxonomy , its , fungi , unite |
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January 20, 2026 |
| Gut-to-soil tutorial typo Tutorials |
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January 16, 2026 |
| PRONAME: Enhancing Taxonomic Accuracy with Nanopore Long-Read Metabarcoding and QIIME2 Community Contributions |
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December 29, 2025 |
| NaMeco - pipeline for nanopore reads Community Contributions nanopore |
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December 15, 2025 |
| Exciting News: New QIIME 2 Tutorial on Arbuscular Mycorrhizal Fungi (AMF) Analysis Now Available! Tutorials taxonomy |
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November 4, 2025 |
| Python Tutorial: Data Visualization with Dokdo API Tutorials tutorial |
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September 18, 2025 |
| Processing, filtering, and evaluating the SILVA database (and other reference sequence data) with RESCRIPt Tutorials feature-classifier , taxonomy , plugin-development , tutorials , rescript |
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June 23, 2025 |
| PICRUSt installation on Mac Community Contributions install , picrust |
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April 29, 2025 |
| ITS, 18S, 23S and 28S new reference databases to use in QIIME2 Community Contributions its , 18s , qiime2 , classifier |
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April 17, 2025 |
| q2-boots: bootstrapped and rarefaction-based diversity analysis 🥾 Plugins q2-boots |
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April 15, 2025 |
| Building a COI database from BOLD references Tutorials |
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March 19, 2025 |
| Greengenes2 2024.09 Community Contributions taxonomy , greengenes2 |
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3814 |
March 3, 2025 |
| q2-kmerizer: a QIIME 2 plugin for k-mer-based diversity analysis Plugins q2-kmerizer |
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February 21, 2025 |
| Calculating dispersion using q2-convexhull Tutorials beta , longitudinal , pcoa |
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February 15, 2025 |
| Artifact Cache Basic Instructions Tutorials |
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June 10, 2024 |
| How to train a GTDB SSU classifier using RESCRIPt Community Contributions feature-classifier , taxonomy , tutorial , rescript , ssu , gtdb |
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January 13, 2025 |
| Q2-ITSxpress: A tutorial on a QIIME 2 plugin to trim ITS sequences Plugins tutorial , its , fungi |
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January 10, 2025 |
| Introducing Greengenes2 2022.10 Community Contributions taxonomy , phylogeny , greengenes , greengenes2 |
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January 9, 2025 |
| How to train a UNITE classifier using RESCRIPt Tutorials feature-classifier , taxonomy , tutorial , its , unite , rescript |
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January 3, 2025 |
| eKOI database in qiime2 format Community Contributions |
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December 17, 2024 |
| Python 3 function cld4py to assign compact letter display letters Data resources |
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December 7, 2024 |
| Pretrained EUKARYOME(v1.9) Database for Eukaryotic Taxonomy in QIIME2 Community Contributions |
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304 |
November 22, 2024 |
| Curated 16S database (MIMt) Data resources taxonomy |
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November 15, 2024 |
| Using RESCRIPt to compile sequence databases and taxonomy classifiers from NCBI Genbank Tutorials taxonomy , rescript |
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October 22, 2024 |
| Decontam functionality within QIIME2 Tutorials Tutorials decontam |
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October 11, 2024 |
| add Linear Regression Lines to Mantel Test Community Contributions |
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September 24, 2024 |
| Fungal ITS analysis tutorial Tutorials |
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May 21, 2024 |
| Available: Pre-trained classifier of V3-V4 (341F, 805R) region with gg_99 Community Contributions feature-classifier |
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9594 |
May 17, 2024 |
| Importing dada2 and Phyloseq objects to QIIME 2 Tutorials |
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May 14, 2024 |