GitHub - BioinformaticsPlatformWIV-ISP/MiST: A rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller. (original) (raw)

PyPI version install with bioconda

MiST is a rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller. It provides tools to download, index, and query schemes, as well as to construct (cg)MLST-based phylogenies.

DOCUMENTATION

The documentation is available on the Wiki.

CONTACT

Create an issue to report bugs, propose new functions or ask for help.

CITATION

Bogaerts, B., Roosens, N.H.C. & Vanneste, K. MiST: rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele calling from draft genomes. BMC Genomics (2025). https://doi.org/10.1186/s12864-025-12324-z