Deprecating old stderr stream setting code in packages using RcppArmadillo (original) (raw)

Issue #391 works towards no longer suppressing a deprecation warning for use of a very old scheme to instantiate variables. When we no longer suppress these warnings we also see a number of packages exhibting a deprecation warning such as

warning: ‘void arma::set_cerr_stream(std::ostream&)’ is deprecated

which is easy to address via an updated, not deprecated call. This issue regroups the stautus of pull requests (or emailed patches) for the packages involved:

• legion (at https://github.com/config-i1/legion) (PR filed 2023-01-15) (merged 2023-01-16) (version 0.1.2 on CRAN 2023-01-31)
• quadrupen (at https://github.com/jchiquet/quadrupenCRAN) (patch created, tested, and emailed 2023-01-15) (heard back 2023-01-16) (version 0.2-10 on CRAN 2023-01-16) (additional issue with deprecation, commit [already made in January] (jchiquet/quadrupenCRAN@544624d)) (new version on CRAN 2023-12-18)
• Rphylopars (at https://github.com/ericgoolsby/Rphylopars) (PR filed 2023-01-15) (no longer on CRAN as of 2024-01-12)
• rxode2 (at https://github.com/nlmixr2/rxode2) (PR filed 2023-01-15) (merged 2023-01-15) (version 2.0.12 on CRAN 2023-03-28)
• smooth (at https://github.com/config-i1) (PR filed 2023-01-15) (merged 2023-01-16) (version 3.2.0 on CRAN on 2023-01-18)
• stm (at https://github.com/bstewart/stm) (PR filed 2023-01-15) (heard back 2023-01-15) (merged 2023-11-30) (new version 1.3.7 at CRAN 2023-12-01)
• r2sundials (at https://github.com/sgsokol/r2sundials) (issue found in re-run 2023-10-29) (pr #2 made 2023-10-31) (new version on CRAN 2023-12-07)