How to interpret OrthologuesStats*.tsv files? (original) (raw)
Hello,
it is not clear to my me how to interpret the files in OrthologuesStats*.tsv.
For instance, this matrix from the OrthologuesStats_one-to-one.tsv file is not symmetric. It is not clear how to infer the total number of one-to-one orthologs for ach species. Is it the rows sum or either le columns sum?
Chaar Latma Pagma Parch Perfl Sanlu Silsi
Chaar 0.0 12540.0 11361.0 13307.0 9480.0 6867.0 14564.0
Latma 12540.0 0.0 10242.0 11736.0 8457.0 6323.0 12891.0
Pagma 11361.0 10242.0 0.0 11388.0 7496.0 6068.0 12220.0
Parch 13307.0 11736.0 11388.0 0.0 9261.0 6840.0 13963.0
Perfl 9480.0 8457.0 7496.0 9261.0 0.0 5292.0 9781.0
Sanlu 6867.0 6323.0 6068.0 6840.0 5292.0 0.0 7035.0
Silsi 14564.0 12891.0 12220.0 13963.0 9781.0 7035.0 0.0
Thank you,
Julien