GitHub - emvolz/nyflu-skyline: Bayesian skyline and skyride analysis for human influenza virus in New York (original) (raw)

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• GPL-3.0 license

Bayesian skyline analysis (BEAST2) for human influenza virus in New York

This repository contains the BSP skyline analysis XML used in:

E.M. Volz and Siveroni, I.S., Bayesian phylodynamic inference with complex models

https://doi.org/10.1101/268052

This analysis used five population sizes which followed a Jeffrey's prior. MCMC was run for 50mil iterations.