nf-core (original) (raw)

Pinned Loading

1. Python package with helper tools for the nf-core community.
   Python 260 203
2. Repository to host tool-specific module files for the Nextflow DSL2 community!
   Nextflow 355 866
3. RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
   Nextflow 1k 765
4. Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
   Nextflow 451 447
5. Config files used to define parameters specific to compute environments at different Institutions
   Nextflow 99 311
6. Where new ideas for nf-core pipelines, special interest groups and more are proposed
   8 3