BUG: pandas incompatible with Python installations lacking bzip2 headers · Issue #53857 · pandas-dev/pandas (original) (raw)

On some Python installations, the libbzip2 headers are not compiled into Python. This is also true on some lightweight Python binaries, including (recently) several used by GitHub actions. It does not make much sense for pandas to require bz2 if one is not doing bzip compression, so I think this import should be safely skipped if not available.

Using /Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages
Finished processing dependencies for pysr==0.14.2
Traceback (most recent call last):
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/runpy.py", line 183, in _run_module_as_main
    mod_name, mod_spec, code = _get_module_details(mod_name, _Error)
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/runpy.py", line 142, in _get_module_details
    return _get_module_details(pkg_main_name, error)
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/runpy.py", line 109, in _get_module_details
    __import__(pkg_name)
  File "/Users/runner/work/PySR/PySR/pysr/__init__.py", line 3, in <module>
    from .sr import (
  File "/Users/runner/work/PySR/PySR/pysr/sr.py", line 7, in <module>
    import pandas as pd
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/__init__.py", line 50, in <module>
    from pandas.core.api import (
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/api.py", line 48, in <module>
    from pandas.core.groupby import (
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/__init__.py", line 1, in <module>
    from pandas.core.groupby.generic import (
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/groupby/generic.py", line 73, in <module>
    from pandas.core.frame import DataFrame
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/frame.py", line 129, in <module>
    from pandas.core import (
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/generic.py", line 122, in <module>
    from pandas.core.describe import describe_ndframe
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/core/describe.py", line 39, in <module>
    from pandas.io.formats.format import format_percentiles
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/formats/format.py", line 99, in <module>
    from pandas.io.common import stringify_path
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/site-packages/pandas/io/common.py", line 4, in <module>
    import bz2
  File "/Users/runner/hostedtoolcache/Python/3.7.17/x64/lib/python3.7/bz2.py", line 19, in <module>
    from _bz2 import BZ2Compressor, BZ2Decompressor
ModuleNotFoundError: No module named '_bz2'
Error: Process completed with exit code 1.

I will submit a PR to fix this shortly.