GitHub - tgac-vumc/StatescopeR (original) (raw)

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• MIT license

StatescopeR

StatescopeR is an R wrapper around Statescope, a computational framework designed to discover cell states from cell type-specific gene expression profiles inferred from bulk RNA profiles. See https://github.com/tgac-vumc/Statescope for the original Python version.

Installation

To install this package, start R (version "4.6") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
    
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("StatescopeR")