GitKraken Desktop GitHub Enterprise Integration (original) (raw)

Last updated: March 2026

This page explains how to connect GitKraken Desktop to GitHub Enterprise Server so you can authenticate, browse repositories, manage remotes, upload SSH keys, and work with pull requests from one interface. Use it when setting up a self-hosted GitHub Enterprise Server connection or switching between enterprise accounts with profiles.

Note: GitHub Enterprise Server integration is available on Advanced, Business, and Enterprise plans.

Requirements and limits

Requirement Value
Plan Advanced, Business, or Enterprise
Supported server versions GitHub Enterprise Server releases from the past year
Authentication Personal access token
Account limit One GitHub Enterprise Server account per profile
SSH behavior Uses Preferences > SSH unless overridden by a GitHub-specific key or system SSH Agent
Hosted variant Self-hosted GitHub Enterprise Server only

Quick Start

  1. Go to Preferences > Integrations in GitKraken Desktop.
  2. Enter your GitHub Enterprise Server host domain and click the link to generate an access token.
  3. Log in to your GitHub Enterprise Server, generate the token, and copy it.
  4. Paste the token into GitKraken Desktop and click Connect.

To configure SSH access after connecting:

Once connected, you can browse repositories when cloning, add remotes, and create and view pull requests from within GitKraken Desktop. GitKraken Desktop supports one GitHub Enterprise Server account per profile. Use multiple profiles to work with more than one account.

What you can do after connecting


How to connect GitHub Enterprise Server

Note: GitKraken supports any GitHub Enterprise Server version released within the past year.

Use GitHub Enterprise Server integration when: your repositories live on a self-hosted GitHub Enterprise Server instance and require token-based access. Don’t use the GitHub.com integration when: your environment depends on enterprise host domains, self-hosted server compatibility, or enterprise-specific credentials.

To authenticate with GitHub Enterprise Server:

  1. Go to Preferences > Integrations in the upper-right corner.

Accessing Preferences and Integrations

  1. Enter your GitHub Enterprise Server host domain and follow the link to generate an access token.

Enter host and generate access token

  1. Log in using your GitHub Enterprise Server credentials and copy the token. Paste it into GitKraken and click .

Generate and copy your GitHub Enterprise access token

Paste token into GitKraken and connect

How to generate or upload an SSH key for GitHub Enterprise Server

Note: GitKraken uses the SSH key set in Preferences > SSH unless you configure a GitHub-specific key or enable your system’s SSH Agent.

After connecting your GitHub Enterprise Server account, you can generate a new SSH key and upload it directly:

Generate SSH key and upload to GitHub Enterprise

You can:


How to use multiple GitHub Enterprise Server accounts

GitKraken supports one GitHub Enterprise Server account per profile. Use multiple profiles to switch between accounts.

Use multiple profiles when: you need to switch between separate enterprise servers or distinct enterprise identities. Don’t use multiple profiles when: one enterprise account already covers the repositories you work with.