R interface to the IGVF Catalog (original) (raw)

rigvf: IGVF Catalog from R

rigvf provides access the Impact of Genomic Variation on Function (IGVF) Catalog from within R/Bioconductor, allowing integration with Bioconductor resources, classes, and methods.

Only limited functionality is currently implemented, mostly centered around associations among genetic variants, genomic elements, and genes.

Installation

Install the development version from GitHub with:

## install.packages("BiocManager") # if not installed
BiocManager::install("IGVF/rigvf")