Anna Drożak - Academia.edu (original) (raw)

Papers by Anna Drożak

Research paper thumbnail of Two pleiotropic drug resistance transporters of Nicotiana tabacum are involved in pathogen-resistance

Research paper thumbnail of Nicotiana plumbaginifoliaplants silenced for the ATP-binding cassette transporter geneNpPDR1show increased susceptibility to a group of fungal and oomycete pathogens

Molecular Plant Pathology, 2009

The behaviour of Nicotiana plumbaginifolia plants silenced for the ATP-binding cassette transport... more The behaviour of Nicotiana plumbaginifolia plants silenced for the ATP-binding cassette transporter gene NpPDR1 was investigated in response to fungal and oomycete infections. The importance of NpPDR1 in plant defence was demonstrated for two organs in which NpPDR1 is constitutively expressed: the roots and the petal epidermis. The roots of the plantlets of two lines silenced for NpPDR1 expression were clearly more sensitive than those of controls to the fungal pathogens Botrytis cinerea, Fusarium oxysporum sp., F. oxysporum f. sp. nicotianae, F. oxysporum f. sp. melonis and Rhizoctonia solani, as well as to the oomycete pathogen Phytophthora nicotianae race 0. The Ph gene-linked resistance of N. plumbaginifolia to P. nicotianae race 0 was totally ineffective in NpPDR1-silenced lines. In addition, the petals of the NpPDR1-silenced lines were spotted 15%-20% more rapidly by B. cinerea than were the controls. The rapid induction (after 2-4 days) of NpPDR1 expression in N. plumbaginifolia and N. tabacum mature leaves in response to pathogen presence was demonstrated for the first time with fungi and one oomycete: R. solani, F. oxysporum and P. nicotianae. With B. cinerea, such rapid expression was not observed in healthy mature leaves. NpPDR1 expression was not observed during latent infections of B. cinerea in N. plumbaginifolia and N. tabacum, but was induced when conditions facilitated B. cinerea development in leaves, such as leaf ageing or an initial root infection. This work demonstrates the increased sensitivity of NpPDR1-silenced N. plumbaginifolia plants to all of the fungal and oomycete pathogens investigated.

Research paper thumbnail of TRPV6 functionally defective variants are associated with chronic pancreatitis in non-alcoholic early-onset polish and German patients

Research paper thumbnail of How Light Reactions of Photosynthesis in C4 Plants Are Optimized and Protected under High Light Conditions

International Journal of Molecular Sciences

Most C4 plants that naturally occur in tropical or subtropical climates, in high light environmen... more Most C4 plants that naturally occur in tropical or subtropical climates, in high light environments, had to evolve a series of adaptations of photosynthesis that allowed them to grow under these conditions. In this review, we summarize mechanisms that ensure the balancing of energy distribution, counteract photoinhibition, and allow the dissipation of excess light energy. They secure effective electron transport in light reactions of photosynthesis, which will lead to the production of NADPH and ATP. Furthermore, a higher content of the cyclic electron transport components and an increase in ATP production are observed, which is necessary for the metabolism of C4 for effective assimilation of CO2. Most of the data are provided by studies of the genus Flaveria, where species belonging to different metabolic subtypes and intermediate forms between C3 and C4 are present. All described mechanisms that function in mesophyll and bundle sheath chloroplasts, into which photosynthetic reacti...

Research paper thumbnail of The effect of temperature conditions during growth on the transformation frequency of Coccomyxa subellipsoidea C-169 obtained by electroporation

Biochemistry and Biophysics Reports, 2022

In this study, we have shown that transformation efficiency of Coccomyxa subellipsoidea C-169 obt... more In this study, we have shown that transformation efficiency of Coccomyxa subellipsoidea C-169 obtained by electroporation can be significantly increased by either supra- or sub-optimal growth temperatures.

Research paper thumbnail of TRPV6-defective variants are associated with chronic pancreatitis in Polish pediatric patients

Pancreatology, 2020

The Matthew effect and the halo effect have been elaborated upon, applied, and occasionally misus... more The Matthew effect and the halo effect have been elaborated upon, applied, and occasionally misused. Inspired by prior studies, this study aims to revisit this important issue. Specifically, this study not only reexamines the association between both effects and scholars' future research funding but also investigates the moderation effect of scholars' experience on this association. The data are collected from three different sources, including data from 1085 research projects from the Ministry of Science and Technology in Taiwan. The results show that the Matthew effect and halo effect are indeed advantageous to scholars seeking an increase in research funding, and these effects increase both the amount and the duration of research funding. In addition, the proposed associations are partially moderated by the scholar's experience in applying for research funding. The findings have several theoretical and practical implications that are relevant to funding in science.

Research paper thumbnail of High light induced accumulation of two isoforms of the CF1 alpha-subunit in mesophyll and bundle sheath chloroplasts of C4 plants

Acta Biochimica Polonica, 2008

The effect of light irradiance on the amount of ATP synthase alpha-subunit in mesophyll (M) and b... more The effect of light irradiance on the amount of ATP synthase alpha-subunit in mesophyll (M) and bundle sheath (BS) chloroplasts of C(4) species such as maize (Zea mays L., type NADP-ME), millet (Panicum miliaceum, type NAD-ME) and guinea grass (Panicum maximum, type PEP-CK) was investigated in plants grown under high, moderate and low light intensities equal to 800, 350 and 50 micromol photons m(-2) s(-1), respectively. The results demonstrate that alpha-subunit of ATP synthase in both M and BS chloroplasts is altered by light intensity, but differently in the investigated species. Moreover, we identified two isoforms of the CF(1) alpha-subunit, called alpha and alpha. The CF(1) alpha-subunit was the major isoform and was present in all light conditions, whereas alpha was the minor isoform in low light. A strong increase in the level of the alpha-subunit in maize mesophyll and bundle sheath thylakoids was observed after 50 h of high light treatment. The alpha and alpha-subunits from...

Research paper thumbnail of Comparative analysis of biochemical properties of mesophyll and bundle sheath chloroplasts from various subtypes of C4 plants grown at moderate irradiance

Acta Biochimica Polonica, 2006

The photochemical characteristics of mesophyll and bundle sheath chloroplasts isolated from the l... more The photochemical characteristics of mesophyll and bundle sheath chloroplasts isolated from the leaves of C4 species were investigated in Zea mays (NADP-ME type), Panicum miliaceum (NAD-ME type) and Panicum maximum (PEP-CK type) plants. The aim of this work was to gain information about selected photochemical properties of mesophyll and bundle sheath chloroplasts isolated from C4 plants grown in the same moderate light conditions. Enzymatic as well as mechanical methods were applied for the isolation of bundle sheath chloroplasts. In the case of Z. mays and P. maximum the enzymatic isolation resulted in the loss of some thylakoid polypeptides. It was found that the PSI and PSII activities of mesophyll and bundle sheath chloroplasts of all species studied differed significantly and the differences correlated with the composition of pigment-protein complexes, photophosphorylation efficiency and fluorescence emission characteristic of these chloroplasts. This is the first report showin...

Research paper thumbnail of Chloramphenicol acetyltransferase—a new selectable marker in stable nuclear transformation of the red alga Cyanidioschyzon merolae

Protoplasma, 2015

In this study, we have shown the applicability of chloramphenicol acetyltransferase as a new and ... more In this study, we have shown the applicability of chloramphenicol acetyltransferase as a new and convenient selectable marker for stable nuclear transformation as well as potential chloroplast transformation of Cyanidioschyzon merolae-a new model organism, which offers unique opportunities for studding the mitochondrial and plastid physiology as well as various evolutionary, structural, and functional features of the photosynthetic apparatus.

Research paper thumbnail of The short-term response of Arabidopsis thaliana (C3) and Zea mays (C4) chloroplasts to red and far red light

Planta, 2015

Main conclusion Light quality has various effects on photochemistry and protein phosphorylation i... more Main conclusion Light quality has various effects on photochemistry and protein phosphorylation in Zea mays and Arabidopsis thaliana thylakoids due to different degrees of light penetration across leaves and redox status in chloroplasts. The effect of the spectral quality of light (red, R and far red, FR) on the function of thylakoid proteins in Zea mays and Arabidopsis thaliana was investigated. It was concluded that red light stimulates PSII activity in A. thaliana thylakoids and in maize bundle sheath (BS) thylakoids, but not in mesophyll (M) thylakoids. The light quality did not change PSI activity in M thylakoids of maize. FR used after a white light period increased PSI activity significantly in maize BS and only slightly in A. thaliana thylakoids. As shown by blue native (BN)-PAGE followed by SDS-PAGE, proteins were differently phosphorylated in the thylakoids, indicating their different functions. FR light increased dephosphorylation of LHCII proteins in A. thaliana thylakoids, whereas in maize, dephosphorylation did not occur at all. The rate of phosphorylation was higher in maize BS than in M thylakoids. D1 protein phosphorylation increased in maize and decreased in A. thaliana upon irradiation with both R and growth light (white light, W). Light variations did not change the level of proteins in thylakoids. Our data strongly suggest that response to light quality is a species-dependent phenomenon. We concluded that the maize chloroplasts were differently stimulated, probably due to different degrees of light penetration across the leaf and thereby the redox status in the chloroplasts. These acclimation changes induced by light quality are important in the regulation of chloroplast membrane flexibility and thus its function. Keywords Acclimation to light quality Á Bundle sheath chloroplasts Á Mesophyll chloroplasts Á PSI Á PSII Á Protein phosphorylation Á Red and far red light Á Thylakoids Abbreviations BS Bundle sheath BN-PAGE Blue native electrophoresis CET Cyclic electron transport FR Far red light LHCII Chlorophyll a/b-binding protein of photosystem II M Mesophyll R Red light W White light & El_ zbieta Romanowska

Research paper thumbnail of Metabolic Responses to Lead of Metallicolous and Nonmetallicolous Populations of Armeria maritima

Archives of Environmental Contamination and Toxicology, 2014

Metabolic responses to Pb(NO 3) 2 (Pb) ions of excised leaves of metallicolous (MPs) and nonmetal... more Metabolic responses to Pb(NO 3) 2 (Pb) ions of excised leaves of metallicolous (MPs) and nonmetallicolous populations (NMPs) of Armeria maritima, cultivated on normal soil, were examined. Detached leaves were exposure to Pb for 24 h, and metabolic parameters were investigated. Pb decreased the photosynthesis (Pn) rate and photosystem II (PSII) activity, whereas the photochemical efficiency of PSII remained unchanged. In both populations, Pb ions caused increase in O 2 uptake of dark-treated leaves; however, respiration after Pn was not affected. Pb increased superoxide dismutase activity in MP leaves and malondialdehyde content in NMP leaves. Other metabolites after Pb treatment were increased (proline or H 2 O 2) or decreased (malate). Ascorbate peroxidase activity and adenosine triphosphate content decreased more in MP than in NMP leaves. Our results indicate that A. maritima is well adapted to heavy metal-contaminated soils, and we discuss potential causes of the stimulation of respiration by Pb ions and possible reasons for the tolerance to oxidative stress of plants growing in a metal-rich habitat.

Research paper thumbnail of Light intensity and quality stimulated Deg1-dependent cleavage of PSII components in the chloroplasts of maize

Plant Physiology and Biochemistry, 2013

Proteolytically active and inactive Deg1 isoforms Light dependent Deg1-mediated degradation of PS... more Proteolytically active and inactive Deg1 isoforms Light dependent Deg1-mediated degradation of PSII components in bundle sheath and mesophyll chloroplasts Red and far red monochromatic light PSII turnover a b s t r a c t Recent studies have revealed that photo damages inducing high white light illumination of C3-type plant Arabidopsis thaliana promotes Deg1-mediated degradation of not only photosystem II core proteins D1/ D2 but also minor LHCII proteins CP26, CP29 and PSII-associated PsbS protein. Using biochemical and immunological approaches we show that that the substrate pool of the heterologously expressed Deg1 ortholog protease from C4-type plant Zea mays is very similar to that of the A. thaliana in both mesophyll and bundle sheath chloroplasts. The Deg1-mediated degradation of photosystem II components has been observed after high light and red light treatment of maize leaves, while far red light did not induce Deg1mediated degradation. Moreover, two isoforms of the Deg1 protease have been identified. Their genes are localized in chromosomes 6 and 8. The Pull-Down assay indicated that both proteins were able to bind the same set of chloroplast proteins, nevertheless in vitro digestion of Z. mays thylakoids in the form of inside-out vesicles has raveled that only Deg1 found in chromosome 8 exhibited proteolytic activity. Interestingly, the relative amount of Deg1 proteases in Z. mays bundle sheath chloroplasts (BS) is significantly higher than in mesophyll chloroplasts (M) in spite of lower content of PSII (w20%) in BS.

Research paper thumbnail of Differential turnover of the photosystem II reaction centre D1 protein in mesophyll and bundle sheath chloroplasts of maize

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2009

Photoinhibition is caused by an imbalance between the rates of the damage and repair cycle of pho... more Photoinhibition is caused by an imbalance between the rates of the damage and repair cycle of photosystem II D1 protein in thylakoid membranes. The PSII repair processes include (i) disassembly of damaged PSII-LHCII supercomplexes and PSII core dimers into monomers, (ii) migration of the PSII monomers to the stroma regions of thylakoid membranes, (iii) dephosphorylation of the CP43, D1 and D2 subunits, (iv) degradation of damaged D1 protein, and (v) co-translational insertion of the newly synthesized D1 polypeptide and reassembly of functional PSII complex. Here, we studied the D1 turnover cycle in maize mesophyll and bundle sheath chloroplasts using a protein synthesis inhibitor, lincomycin. In both types of maize chloroplasts, PSII was found as the PSII-LHCII supercomplex, dimer and monomer. The PSII core and the LHCII proteins were phosphorylated in both types of chloroplasts in a light-dependent manner. The rate constants for photoinhibition measured for lincomycin-treated leaves were comparable to those reported for C3 plants, suggesting that the kinetics of the PSII photodamage is similar in C3 and C4 species. During the photoinhibitory treatment the D1 protein was dephosphorylated in both types of chloroplasts but it was rapidly degraded only in the bundle sheath chloroplasts. In mesophyll chloroplasts, PSII monomers accumulated and little degradation of D1 protein was observed. We postulate that the low content of the Deg1 enzyme observed in mesophyll chloroplasts isolated from moderate light grown maize may retard the D1 repair processes in this type of plastids.

Research paper thumbnail of Light-dependent reversal of dark-chilling induced changes in chloroplast structure and arrangement of chlorophyll–protein complexes in bean thylakoid membranes

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2005

Changes in chloroplast structure and rearrangement of chlorophyll-protein (CP) complexes were inv... more Changes in chloroplast structure and rearrangement of chlorophyll-protein (CP) complexes were investigated in detached leaves of bean (Phaseolus vulgaris L. cv. Eureka), a chilling-sensitive plant, during 5-day dark-chilling at 1-C and subsequent 3-h photoactivation under white light (200 Amol photons m À2 s À1) at 22-C. Although, no change in chlorophyll (Chl) content and Chl a/b ratio in all samples was observed, overall fluorescence intensity of fluorescence emission and excitation spectra of thylakoid membranes isolated from dark-chilled leaves decreased to about 50%, and remained after photoactivation at 70% of that of the control sample. Concomitantly, the ratio between fluorescence intensities of PSI and PSII (F736/ F681) at 120 K increased 1.5-fold upon chilling, and was fully reversed after photoactivation. Moreover, chilling stress seems to induce a decrease of the relative contribution of LHCII fluorescence to the thylakoid emission spectra at 120 K, and an increase of that from LHCI and PSI, correlated with a decrease of stability of LHCI-PSI and LHCII trimers, shown by mild-denaturing electrophoresis. These effects were reversed to a large extent after photoactivation, with the exception of LHCII, which remained partly in the aggregated form. In view of these data, it is likely that dark-chilling stress induces partial disassembly of CP complexes, not completely restorable upon photoactivation. These data are further supported by confocal laser scanning fluorescence microscopy, which showed that regular grana arrangement observed in chloroplasts isolated from control leaves was destroyed by dark-chilling stress, and was partially reconstructed after photoactivation. In line with this, Chl a fluorescence spectra of leaf discs demonstrated that dark-chilling caused a decrease of the quantum yield PSII photochemistry (F v /F m) by almost 40% in 5 days. Complete restoration of the photochemical activity of PSII required 9 h post-chilling photoactivation, while only 3 h were needed to reconstruct thylakoid membrane organization and chloroplast structure. The latter demonstrated that the long-term dark-chilled bean leaves started to suffer from photoinhibition after transfer to moderate irradiance and temperature conditions, delaying the recovery of PSII photochemistry, independently of photo-induced reconstruction of PSII complexes.

Research paper thumbnail of Acclimation of mesophyll and bundle sheath chloroplasts of maize to different irradiances during growth

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2006

The regulation by light of the photosynthetic apparatus, and composition of light-harvesting comp... more The regulation by light of the photosynthetic apparatus, and composition of light-harvesting complexes in mesophyll and bundle sheath chloroplasts was investigated in maize. Leaf chlorophyll content, level of plastoquinone, PSI and PSII activities and Lhc polypeptide compositions were determined in plants grown under high, moderate and low irradiances. Photochemical efficiency of PSII, photochemical fluorescence quenching and non-photochemical fluorescence quenching over a range of actinic irradiances were also determined, using chlorophyll a fluorescence analysis. Acclimation of plants to different light conditions caused marked changes in light-harvesting complexes, LHCI and LHCII, and antenna complexes were also reorganized in these types of chloroplasts. The level of LHCII increased in plants grown in low light, even in agranal bundle sheath chloroplasts where the amount of PSII was strongly reduced. Irradiance also affected LHCI complex and the number of structural polypeptides, in this complex, generally decreased in chloroplasts from plants grown under lower light. Surprisingly moderate and low irradiances during growth do not affect the light reaction and fluorescence parameters of plants but generated differences in composition of lightharvesting complexes in chloroplasts. On the other hand, the changes in photosynthetic apparatus in plants acclimated to high light, resulted in a higher efficiency of photosynthesis. Based on these observations we propose that light acclimation to high light in maize is tightly coordinated adjustment of light reaction components/activity in both mesophyll and bundle sheath chloroplasts. Acclimation is concerned with balancing light utilization and level of the content of LHC complexes differently in both types of chloroplasts.

Research paper thumbnail of Organization and activity of photosystems in the mesophyll and bundle sheath chloroplasts of maize

Journal of Plant Physiology, 2006

Photosystem I and Photosystem II activities, as well as polypeptide content of chlorophyll (Chl)-... more Photosystem I and Photosystem II activities, as well as polypeptide content of chlorophyll (Chl)-protein complexes were analyzed in mesophyll (M) and bundle sheath (BS) chloroplasts of maize (Zea mays L.) growing under moderate and very low irradiance. This paper discusses the application of two techniques: mechanical and enzymatic, for separation of M and BS chloroplasts. The enzymatic isolation method resulted in depletion of polypeptides of oxygen evolving complex (OEC) and aCF1 subunit of coupling factor; D1 and D2 polypeptides of PSII were reduced by 50%, whereas light harvesting complex of photosystem II (LHCII) proteins were still detectable. Loss of PSII polypeptides correlated with the decreasing of Chl fluorescence measured at room temperature. Using mechanical isolation of chloroplasts from BS cells, all tested polypeptides could be detected. We found a total lack of O 2 evolution in BS chloroplasts, but dichlorophenolindophenol (DCPIP) was photoreduced. PSI activity of chloroplasts isolated from 14-and 28-day-old plants was similar in BS chloroplasts in moderate light (ML), but in low light (LL) it was reduced by about 20%. PSI and PSII activities in M chloroplasts of plants growing in ML decreased with aging of plants. In older LL-grown plants, activities of both photosystems were higher than those observed in chloroplasts from ML-grown plants.

Research paper thumbnail of Vol. 53 No. 4/2006, 709–719 Regular paper

Comparative analysis of biochemical properties of mesophyll and bundle sheath chloroplasts from v... more Comparative analysis of biochemical properties of mesophyll and bundle sheath chloroplasts from various subtypes of C 4 plants grown at moderate irradiance

Research paper thumbnail of Chlorophyll-proteins complexes and photochemical activity of mesophyll and bundle sheath chloroplasts of C4 plants

Polish Journal of Natural Sciences. Supplement, 2003

Research paper thumbnail of Fotosynteza typu C4

Research paper thumbnail of Structural organization of photosynthetic apparatus in mesophyll and bundle sheath chloroplasts of C4 plants of NADP-ME subtype

Biotechnologia. Journal of Biotechnology, Computational Biology and Bionanotechnology, 2013

Research paper thumbnail of Two pleiotropic drug resistance transporters of Nicotiana tabacum are involved in pathogen-resistance

Research paper thumbnail of Nicotiana plumbaginifoliaplants silenced for the ATP-binding cassette transporter geneNpPDR1show increased susceptibility to a group of fungal and oomycete pathogens

Molecular Plant Pathology, 2009

The behaviour of Nicotiana plumbaginifolia plants silenced for the ATP-binding cassette transport... more The behaviour of Nicotiana plumbaginifolia plants silenced for the ATP-binding cassette transporter gene NpPDR1 was investigated in response to fungal and oomycete infections. The importance of NpPDR1 in plant defence was demonstrated for two organs in which NpPDR1 is constitutively expressed: the roots and the petal epidermis. The roots of the plantlets of two lines silenced for NpPDR1 expression were clearly more sensitive than those of controls to the fungal pathogens Botrytis cinerea, Fusarium oxysporum sp., F. oxysporum f. sp. nicotianae, F. oxysporum f. sp. melonis and Rhizoctonia solani, as well as to the oomycete pathogen Phytophthora nicotianae race 0. The Ph gene-linked resistance of N. plumbaginifolia to P. nicotianae race 0 was totally ineffective in NpPDR1-silenced lines. In addition, the petals of the NpPDR1-silenced lines were spotted 15%-20% more rapidly by B. cinerea than were the controls. The rapid induction (after 2-4 days) of NpPDR1 expression in N. plumbaginifolia and N. tabacum mature leaves in response to pathogen presence was demonstrated for the first time with fungi and one oomycete: R. solani, F. oxysporum and P. nicotianae. With B. cinerea, such rapid expression was not observed in healthy mature leaves. NpPDR1 expression was not observed during latent infections of B. cinerea in N. plumbaginifolia and N. tabacum, but was induced when conditions facilitated B. cinerea development in leaves, such as leaf ageing or an initial root infection. This work demonstrates the increased sensitivity of NpPDR1-silenced N. plumbaginifolia plants to all of the fungal and oomycete pathogens investigated.

Research paper thumbnail of TRPV6 functionally defective variants are associated with chronic pancreatitis in non-alcoholic early-onset polish and German patients

Research paper thumbnail of How Light Reactions of Photosynthesis in C4 Plants Are Optimized and Protected under High Light Conditions

International Journal of Molecular Sciences

Most C4 plants that naturally occur in tropical or subtropical climates, in high light environmen... more Most C4 plants that naturally occur in tropical or subtropical climates, in high light environments, had to evolve a series of adaptations of photosynthesis that allowed them to grow under these conditions. In this review, we summarize mechanisms that ensure the balancing of energy distribution, counteract photoinhibition, and allow the dissipation of excess light energy. They secure effective electron transport in light reactions of photosynthesis, which will lead to the production of NADPH and ATP. Furthermore, a higher content of the cyclic electron transport components and an increase in ATP production are observed, which is necessary for the metabolism of C4 for effective assimilation of CO2. Most of the data are provided by studies of the genus Flaveria, where species belonging to different metabolic subtypes and intermediate forms between C3 and C4 are present. All described mechanisms that function in mesophyll and bundle sheath chloroplasts, into which photosynthetic reacti...

Research paper thumbnail of The effect of temperature conditions during growth on the transformation frequency of Coccomyxa subellipsoidea C-169 obtained by electroporation

Biochemistry and Biophysics Reports, 2022

In this study, we have shown that transformation efficiency of Coccomyxa subellipsoidea C-169 obt... more In this study, we have shown that transformation efficiency of Coccomyxa subellipsoidea C-169 obtained by electroporation can be significantly increased by either supra- or sub-optimal growth temperatures.

Research paper thumbnail of TRPV6-defective variants are associated with chronic pancreatitis in Polish pediatric patients

Pancreatology, 2020

The Matthew effect and the halo effect have been elaborated upon, applied, and occasionally misus... more The Matthew effect and the halo effect have been elaborated upon, applied, and occasionally misused. Inspired by prior studies, this study aims to revisit this important issue. Specifically, this study not only reexamines the association between both effects and scholars' future research funding but also investigates the moderation effect of scholars' experience on this association. The data are collected from three different sources, including data from 1085 research projects from the Ministry of Science and Technology in Taiwan. The results show that the Matthew effect and halo effect are indeed advantageous to scholars seeking an increase in research funding, and these effects increase both the amount and the duration of research funding. In addition, the proposed associations are partially moderated by the scholar's experience in applying for research funding. The findings have several theoretical and practical implications that are relevant to funding in science.

Research paper thumbnail of High light induced accumulation of two isoforms of the CF1 alpha-subunit in mesophyll and bundle sheath chloroplasts of C4 plants

Acta Biochimica Polonica, 2008

The effect of light irradiance on the amount of ATP synthase alpha-subunit in mesophyll (M) and b... more The effect of light irradiance on the amount of ATP synthase alpha-subunit in mesophyll (M) and bundle sheath (BS) chloroplasts of C(4) species such as maize (Zea mays L., type NADP-ME), millet (Panicum miliaceum, type NAD-ME) and guinea grass (Panicum maximum, type PEP-CK) was investigated in plants grown under high, moderate and low light intensities equal to 800, 350 and 50 micromol photons m(-2) s(-1), respectively. The results demonstrate that alpha-subunit of ATP synthase in both M and BS chloroplasts is altered by light intensity, but differently in the investigated species. Moreover, we identified two isoforms of the CF(1) alpha-subunit, called alpha and alpha. The CF(1) alpha-subunit was the major isoform and was present in all light conditions, whereas alpha was the minor isoform in low light. A strong increase in the level of the alpha-subunit in maize mesophyll and bundle sheath thylakoids was observed after 50 h of high light treatment. The alpha and alpha-subunits from...

Research paper thumbnail of Comparative analysis of biochemical properties of mesophyll and bundle sheath chloroplasts from various subtypes of C4 plants grown at moderate irradiance

Acta Biochimica Polonica, 2006

The photochemical characteristics of mesophyll and bundle sheath chloroplasts isolated from the l... more The photochemical characteristics of mesophyll and bundle sheath chloroplasts isolated from the leaves of C4 species were investigated in Zea mays (NADP-ME type), Panicum miliaceum (NAD-ME type) and Panicum maximum (PEP-CK type) plants. The aim of this work was to gain information about selected photochemical properties of mesophyll and bundle sheath chloroplasts isolated from C4 plants grown in the same moderate light conditions. Enzymatic as well as mechanical methods were applied for the isolation of bundle sheath chloroplasts. In the case of Z. mays and P. maximum the enzymatic isolation resulted in the loss of some thylakoid polypeptides. It was found that the PSI and PSII activities of mesophyll and bundle sheath chloroplasts of all species studied differed significantly and the differences correlated with the composition of pigment-protein complexes, photophosphorylation efficiency and fluorescence emission characteristic of these chloroplasts. This is the first report showin...

Research paper thumbnail of Chloramphenicol acetyltransferase—a new selectable marker in stable nuclear transformation of the red alga Cyanidioschyzon merolae

Protoplasma, 2015

In this study, we have shown the applicability of chloramphenicol acetyltransferase as a new and ... more In this study, we have shown the applicability of chloramphenicol acetyltransferase as a new and convenient selectable marker for stable nuclear transformation as well as potential chloroplast transformation of Cyanidioschyzon merolae-a new model organism, which offers unique opportunities for studding the mitochondrial and plastid physiology as well as various evolutionary, structural, and functional features of the photosynthetic apparatus.

Research paper thumbnail of The short-term response of Arabidopsis thaliana (C3) and Zea mays (C4) chloroplasts to red and far red light

Planta, 2015

Main conclusion Light quality has various effects on photochemistry and protein phosphorylation i... more Main conclusion Light quality has various effects on photochemistry and protein phosphorylation in Zea mays and Arabidopsis thaliana thylakoids due to different degrees of light penetration across leaves and redox status in chloroplasts. The effect of the spectral quality of light (red, R and far red, FR) on the function of thylakoid proteins in Zea mays and Arabidopsis thaliana was investigated. It was concluded that red light stimulates PSII activity in A. thaliana thylakoids and in maize bundle sheath (BS) thylakoids, but not in mesophyll (M) thylakoids. The light quality did not change PSI activity in M thylakoids of maize. FR used after a white light period increased PSI activity significantly in maize BS and only slightly in A. thaliana thylakoids. As shown by blue native (BN)-PAGE followed by SDS-PAGE, proteins were differently phosphorylated in the thylakoids, indicating their different functions. FR light increased dephosphorylation of LHCII proteins in A. thaliana thylakoids, whereas in maize, dephosphorylation did not occur at all. The rate of phosphorylation was higher in maize BS than in M thylakoids. D1 protein phosphorylation increased in maize and decreased in A. thaliana upon irradiation with both R and growth light (white light, W). Light variations did not change the level of proteins in thylakoids. Our data strongly suggest that response to light quality is a species-dependent phenomenon. We concluded that the maize chloroplasts were differently stimulated, probably due to different degrees of light penetration across the leaf and thereby the redox status in the chloroplasts. These acclimation changes induced by light quality are important in the regulation of chloroplast membrane flexibility and thus its function. Keywords Acclimation to light quality Á Bundle sheath chloroplasts Á Mesophyll chloroplasts Á PSI Á PSII Á Protein phosphorylation Á Red and far red light Á Thylakoids Abbreviations BS Bundle sheath BN-PAGE Blue native electrophoresis CET Cyclic electron transport FR Far red light LHCII Chlorophyll a/b-binding protein of photosystem II M Mesophyll R Red light W White light & El_ zbieta Romanowska

Research paper thumbnail of Metabolic Responses to Lead of Metallicolous and Nonmetallicolous Populations of Armeria maritima

Archives of Environmental Contamination and Toxicology, 2014

Metabolic responses to Pb(NO 3) 2 (Pb) ions of excised leaves of metallicolous (MPs) and nonmetal... more Metabolic responses to Pb(NO 3) 2 (Pb) ions of excised leaves of metallicolous (MPs) and nonmetallicolous populations (NMPs) of Armeria maritima, cultivated on normal soil, were examined. Detached leaves were exposure to Pb for 24 h, and metabolic parameters were investigated. Pb decreased the photosynthesis (Pn) rate and photosystem II (PSII) activity, whereas the photochemical efficiency of PSII remained unchanged. In both populations, Pb ions caused increase in O 2 uptake of dark-treated leaves; however, respiration after Pn was not affected. Pb increased superoxide dismutase activity in MP leaves and malondialdehyde content in NMP leaves. Other metabolites after Pb treatment were increased (proline or H 2 O 2) or decreased (malate). Ascorbate peroxidase activity and adenosine triphosphate content decreased more in MP than in NMP leaves. Our results indicate that A. maritima is well adapted to heavy metal-contaminated soils, and we discuss potential causes of the stimulation of respiration by Pb ions and possible reasons for the tolerance to oxidative stress of plants growing in a metal-rich habitat.

Research paper thumbnail of Light intensity and quality stimulated Deg1-dependent cleavage of PSII components in the chloroplasts of maize

Plant Physiology and Biochemistry, 2013

Proteolytically active and inactive Deg1 isoforms Light dependent Deg1-mediated degradation of PS... more Proteolytically active and inactive Deg1 isoforms Light dependent Deg1-mediated degradation of PSII components in bundle sheath and mesophyll chloroplasts Red and far red monochromatic light PSII turnover a b s t r a c t Recent studies have revealed that photo damages inducing high white light illumination of C3-type plant Arabidopsis thaliana promotes Deg1-mediated degradation of not only photosystem II core proteins D1/ D2 but also minor LHCII proteins CP26, CP29 and PSII-associated PsbS protein. Using biochemical and immunological approaches we show that that the substrate pool of the heterologously expressed Deg1 ortholog protease from C4-type plant Zea mays is very similar to that of the A. thaliana in both mesophyll and bundle sheath chloroplasts. The Deg1-mediated degradation of photosystem II components has been observed after high light and red light treatment of maize leaves, while far red light did not induce Deg1mediated degradation. Moreover, two isoforms of the Deg1 protease have been identified. Their genes are localized in chromosomes 6 and 8. The Pull-Down assay indicated that both proteins were able to bind the same set of chloroplast proteins, nevertheless in vitro digestion of Z. mays thylakoids in the form of inside-out vesicles has raveled that only Deg1 found in chromosome 8 exhibited proteolytic activity. Interestingly, the relative amount of Deg1 proteases in Z. mays bundle sheath chloroplasts (BS) is significantly higher than in mesophyll chloroplasts (M) in spite of lower content of PSII (w20%) in BS.

Research paper thumbnail of Differential turnover of the photosystem II reaction centre D1 protein in mesophyll and bundle sheath chloroplasts of maize

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2009

Photoinhibition is caused by an imbalance between the rates of the damage and repair cycle of pho... more Photoinhibition is caused by an imbalance between the rates of the damage and repair cycle of photosystem II D1 protein in thylakoid membranes. The PSII repair processes include (i) disassembly of damaged PSII-LHCII supercomplexes and PSII core dimers into monomers, (ii) migration of the PSII monomers to the stroma regions of thylakoid membranes, (iii) dephosphorylation of the CP43, D1 and D2 subunits, (iv) degradation of damaged D1 protein, and (v) co-translational insertion of the newly synthesized D1 polypeptide and reassembly of functional PSII complex. Here, we studied the D1 turnover cycle in maize mesophyll and bundle sheath chloroplasts using a protein synthesis inhibitor, lincomycin. In both types of maize chloroplasts, PSII was found as the PSII-LHCII supercomplex, dimer and monomer. The PSII core and the LHCII proteins were phosphorylated in both types of chloroplasts in a light-dependent manner. The rate constants for photoinhibition measured for lincomycin-treated leaves were comparable to those reported for C3 plants, suggesting that the kinetics of the PSII photodamage is similar in C3 and C4 species. During the photoinhibitory treatment the D1 protein was dephosphorylated in both types of chloroplasts but it was rapidly degraded only in the bundle sheath chloroplasts. In mesophyll chloroplasts, PSII monomers accumulated and little degradation of D1 protein was observed. We postulate that the low content of the Deg1 enzyme observed in mesophyll chloroplasts isolated from moderate light grown maize may retard the D1 repair processes in this type of plastids.

Research paper thumbnail of Light-dependent reversal of dark-chilling induced changes in chloroplast structure and arrangement of chlorophyll–protein complexes in bean thylakoid membranes

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2005

Changes in chloroplast structure and rearrangement of chlorophyll-protein (CP) complexes were inv... more Changes in chloroplast structure and rearrangement of chlorophyll-protein (CP) complexes were investigated in detached leaves of bean (Phaseolus vulgaris L. cv. Eureka), a chilling-sensitive plant, during 5-day dark-chilling at 1-C and subsequent 3-h photoactivation under white light (200 Amol photons m À2 s À1) at 22-C. Although, no change in chlorophyll (Chl) content and Chl a/b ratio in all samples was observed, overall fluorescence intensity of fluorescence emission and excitation spectra of thylakoid membranes isolated from dark-chilled leaves decreased to about 50%, and remained after photoactivation at 70% of that of the control sample. Concomitantly, the ratio between fluorescence intensities of PSI and PSII (F736/ F681) at 120 K increased 1.5-fold upon chilling, and was fully reversed after photoactivation. Moreover, chilling stress seems to induce a decrease of the relative contribution of LHCII fluorescence to the thylakoid emission spectra at 120 K, and an increase of that from LHCI and PSI, correlated with a decrease of stability of LHCI-PSI and LHCII trimers, shown by mild-denaturing electrophoresis. These effects were reversed to a large extent after photoactivation, with the exception of LHCII, which remained partly in the aggregated form. In view of these data, it is likely that dark-chilling stress induces partial disassembly of CP complexes, not completely restorable upon photoactivation. These data are further supported by confocal laser scanning fluorescence microscopy, which showed that regular grana arrangement observed in chloroplasts isolated from control leaves was destroyed by dark-chilling stress, and was partially reconstructed after photoactivation. In line with this, Chl a fluorescence spectra of leaf discs demonstrated that dark-chilling caused a decrease of the quantum yield PSII photochemistry (F v /F m) by almost 40% in 5 days. Complete restoration of the photochemical activity of PSII required 9 h post-chilling photoactivation, while only 3 h were needed to reconstruct thylakoid membrane organization and chloroplast structure. The latter demonstrated that the long-term dark-chilled bean leaves started to suffer from photoinhibition after transfer to moderate irradiance and temperature conditions, delaying the recovery of PSII photochemistry, independently of photo-induced reconstruction of PSII complexes.

Research paper thumbnail of Acclimation of mesophyll and bundle sheath chloroplasts of maize to different irradiances during growth

Biochimica et Biophysica Acta (BBA) - Bioenergetics, 2006

The regulation by light of the photosynthetic apparatus, and composition of light-harvesting comp... more The regulation by light of the photosynthetic apparatus, and composition of light-harvesting complexes in mesophyll and bundle sheath chloroplasts was investigated in maize. Leaf chlorophyll content, level of plastoquinone, PSI and PSII activities and Lhc polypeptide compositions were determined in plants grown under high, moderate and low irradiances. Photochemical efficiency of PSII, photochemical fluorescence quenching and non-photochemical fluorescence quenching over a range of actinic irradiances were also determined, using chlorophyll a fluorescence analysis. Acclimation of plants to different light conditions caused marked changes in light-harvesting complexes, LHCI and LHCII, and antenna complexes were also reorganized in these types of chloroplasts. The level of LHCII increased in plants grown in low light, even in agranal bundle sheath chloroplasts where the amount of PSII was strongly reduced. Irradiance also affected LHCI complex and the number of structural polypeptides, in this complex, generally decreased in chloroplasts from plants grown under lower light. Surprisingly moderate and low irradiances during growth do not affect the light reaction and fluorescence parameters of plants but generated differences in composition of lightharvesting complexes in chloroplasts. On the other hand, the changes in photosynthetic apparatus in plants acclimated to high light, resulted in a higher efficiency of photosynthesis. Based on these observations we propose that light acclimation to high light in maize is tightly coordinated adjustment of light reaction components/activity in both mesophyll and bundle sheath chloroplasts. Acclimation is concerned with balancing light utilization and level of the content of LHC complexes differently in both types of chloroplasts.

Research paper thumbnail of Organization and activity of photosystems in the mesophyll and bundle sheath chloroplasts of maize

Journal of Plant Physiology, 2006

Photosystem I and Photosystem II activities, as well as polypeptide content of chlorophyll (Chl)-... more Photosystem I and Photosystem II activities, as well as polypeptide content of chlorophyll (Chl)-protein complexes were analyzed in mesophyll (M) and bundle sheath (BS) chloroplasts of maize (Zea mays L.) growing under moderate and very low irradiance. This paper discusses the application of two techniques: mechanical and enzymatic, for separation of M and BS chloroplasts. The enzymatic isolation method resulted in depletion of polypeptides of oxygen evolving complex (OEC) and aCF1 subunit of coupling factor; D1 and D2 polypeptides of PSII were reduced by 50%, whereas light harvesting complex of photosystem II (LHCII) proteins were still detectable. Loss of PSII polypeptides correlated with the decreasing of Chl fluorescence measured at room temperature. Using mechanical isolation of chloroplasts from BS cells, all tested polypeptides could be detected. We found a total lack of O 2 evolution in BS chloroplasts, but dichlorophenolindophenol (DCPIP) was photoreduced. PSI activity of chloroplasts isolated from 14-and 28-day-old plants was similar in BS chloroplasts in moderate light (ML), but in low light (LL) it was reduced by about 20%. PSI and PSII activities in M chloroplasts of plants growing in ML decreased with aging of plants. In older LL-grown plants, activities of both photosystems were higher than those observed in chloroplasts from ML-grown plants.

Research paper thumbnail of Vol. 53 No. 4/2006, 709–719 Regular paper

Comparative analysis of biochemical properties of mesophyll and bundle sheath chloroplasts from v... more Comparative analysis of biochemical properties of mesophyll and bundle sheath chloroplasts from various subtypes of C 4 plants grown at moderate irradiance

Research paper thumbnail of Chlorophyll-proteins complexes and photochemical activity of mesophyll and bundle sheath chloroplasts of C4 plants

Polish Journal of Natural Sciences. Supplement, 2003

Research paper thumbnail of Fotosynteza typu C4

Research paper thumbnail of Structural organization of photosynthetic apparatus in mesophyll and bundle sheath chloroplasts of C4 plants of NADP-ME subtype

Biotechnologia. Journal of Biotechnology, Computational Biology and Bionanotechnology, 2013