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Papers by Minaspi Bantawa

Research paper thumbnail of Time-resolved microstructural changes in large amplitude oscillatory shear of model single and double component soft gels

Soft particulate gels can reversibly yield when sufficient deformation is applied, and the charac... more Soft particulate gels can reversibly yield when sufficient deformation is applied, and the characteristics of this transition can be enhanced or limited by designing hybrid hydrogel composites. While the microscopic dynamics and macroscopic rheology of these systems have been studied separately in detail, the development of direct connections between the two has been difficult, particularly with regard to the non-linear rheology. To bridge this gap, we perform a series of large amplitude oscillatory shear (LAOS) numerical measurements on model soft particulate gels at different volume fractions using coarse-grained molecular dynamics simulations. We first study a particulate network with local bending stiffness and then we combine it with a second component that can provide additional crosslinking to obtain two-component networks. Through the sequence of physical processes (SPP) framework we define time-resolved dynamic moduli and, by tracking the changes in these moduli through the period, we can distinguish transitions in the material behavior as a function of time. This approach helps us establish the microsopic origin of the non-linear rheology by connecting the changes in dynamics moduli to the corresponding microstructural changes during the deformation including the non-affine displacement of particles, and the breakage, formation, and orientation of bonds.

Research paper thumbnail of Microscopic interactions and emerging elasticity in model soft particulate gels

Journal of Physics: Condensed Matter, 2021

We discuss a class of models for particulate gels in which the particle contacts are described by... more We discuss a class of models for particulate gels in which the particle contacts are described by an effective interaction combining a two-body attraction and a three-body angular repulsion. Using molecular dynamics, we show how varying the model parameters allows us to sample, for a given gelation protocol, a variety of gel morphologies. For a specific set of the model parameters, we identify the local elastic structures that get interlocked in the gel network. Using the analytical expression of their elastic energy from the microscopic interactions, we can estimate their contribution to the emergent elasticity of the gel and gain new insight into its origin.

Research paper thumbnail of Hardening and Softening Materials: the role of network topology in soft gels

Research paper thumbnail of Linear viscoelastic spectra of soft particulate gels: master curve and physical origin of the fractal constitutive behavior

Bulletin of the American Physical Society, 2021

Research paper thumbnail of Competitive Supramolecular Associations Mediate the Viscoelasticity of Binary Hydrogels

ACS Central Science

Supramolecular polymers are known to form strong and resilient hydrogels which can take up large ... more Supramolecular polymers are known to form strong and resilient hydrogels which can take up large amounts of water while exhibiting ease of processing and self-healing. They also possess similarities with networks of biological macromolecules. The combination of these features makes supramolecular polymers ideal candidates for studying mechanisms and consequences of self-assembly, which are relevant to biological materials. At the same time, this renders investigations of mixed hydrogels based on different supramolecular compounds necessary, since this substantially widens their applicability. Here, we address unusual viscoelastic properties of a class of binary hydrogels made by mixing fibrillar supramolecular polymers that are formed from two compounds: 1,3,5-benzene-tricarboxamide decorated with aliphatic chains terminated by tetra(ethylene glycol) (BTA) and a 20 kg/ mol telechelic poly(ethylene glycol) decorated with the same hydrogen bonding BTA motif on both ends (BTA-PEG-BTA). Using a suite of experimental and simulation techniques, we find that the respective single-compound-based supramolecular systems form very different networks which exhibit drastically different rheology. More strikingly, mixing the compounds results in a nonmonotonic dependence of modulus and viscosity on composition, suggesting a competition between interactions of the two compounds, which can then be used to fine-tune the mechanical properties. Simulations offer insight into the nature of this competition and their remarkable qualitative agreement with the experimental results is promising for the design of mixed hydrogels with desired and tunable properties. Their combination with a sensitive dynamic probe (here rheology) offer a powerful toolbox to explore the unique properties of binary hydrogel mixtures.

Research paper thumbnail of Competitive Supramolecular Associations Mediate the Viscoelasticity of Binary Hydrogels

ACS Central Science

Supramolecular polymers are known to form strong and resilient hydrogels which can take up large ... more Supramolecular polymers are known to form strong and resilient hydrogels which can take up large amounts of water while exhibiting ease of processing and self-healing. They also possess similarities with networks of biological macromolecules. The combination of these features makes supramolecular polymers ideal candidates for studying mechanisms and consequences of self-assembly, which are relevant to biological materials. At the same time, this renders investigations of mixed hydrogels based on different supramolecular compounds necessary, since this substantially widens their applicability. Here, we address unusual viscoelastic properties of a class of binary hydrogels made by mixing fibrillar supramolecular polymers that are formed from two compounds: 1,3,5-benzene-tricarboxamide decorated with aliphatic chains terminated by tetra(ethylene glycol) (BTA) and a 20 kg/ mol telechelic poly(ethylene glycol) decorated with the same hydrogen bonding BTA motif on both ends (BTA-PEG-BTA). Using a suite of experimental and simulation techniques, we find that the respective single-compound-based supramolecular systems form very different networks which exhibit drastically different rheology. More strikingly, mixing the compounds results in a nonmonotonic dependence of modulus and viscosity on composition, suggesting a competition between interactions of the two compounds, which can then be used to fine-tune the mechanical properties. Simulations offer insight into the nature of this competition and their remarkable qualitative agreement with the experimental results is promising for the design of mixed hydrogels with desired and tunable properties. Their combination with a sensitive dynamic probe (here rheology) offer a powerful toolbox to explore the unique properties of binary hydrogel mixtures.

Research paper thumbnail of Competitive Supramolecular Associations Mediate the Viscoelasticity of Binary Hydrogels

ACS Central Science

Supramolecular polymers are known to form strong and resilient hydrogels which can take up large ... more Supramolecular polymers are known to form strong and resilient hydrogels which can take up large amounts of water while exhibiting ease of processing and self-healing. They also possess similarities with networks of biological macromolecules. The combination of these features makes supramolecular polymers ideal candidates for studying mechanisms and consequences of self-assembly, which are relevant to biological materials. At the same time, this renders investigations of mixed hydrogels based on different supramolecular compounds necessary, since this substantially widens their applicability. Here, we address unusual viscoelastic properties of a class of binary hydrogels made by mixing fibrillar supramolecular polymers that are formed from two compounds: 1,3,5-benzene-tricarboxamide decorated with aliphatic chains terminated by tetra(ethylene glycol) (BTA) and a 20 kg/ mol telechelic poly(ethylene glycol) decorated with the same hydrogen bonding BTA motif on both ends (BTA-PEG-BTA). Using a suite of experimental and simulation techniques, we find that the respective single-compound-based supramolecular systems form very different networks which exhibit drastically different rheology. More strikingly, mixing the compounds results in a nonmonotonic dependence of modulus and viscosity on composition, suggesting a competition between interactions of the two compounds, which can then be used to fine-tune the mechanical properties. Simulations offer insight into the nature of this competition and their remarkable qualitative agreement with the experimental results is promising for the design of mixed hydrogels with desired and tunable properties. Their combination with a sensitive dynamic probe (here rheology) offer a powerful toolbox to explore the unique properties of binary hydrogel mixtures.

Research paper thumbnail of Disease-causing mutation in α-actinin-4 promotes podocyte detachment through maladaptation to periodic stretch

Proceedings of the National Academy of Sciences of the United States of America, Jan 13, 2018

α-Actinin-4 (ACTN4) bundles and cross-links actin filaments to confer mechanical resilience to th... more α-Actinin-4 (ACTN4) bundles and cross-links actin filaments to confer mechanical resilience to the reconstituted actin network. How this resilience is built and dynamically regulated in the podocyte, and the cause of its failure in ACTN4 mutation-associated focal segmental glomerulosclerosis (FSGS), remains poorly defined. Using primary podocytes isolated from wild-type (WT) and FSGS-causing point mutant Actn4 knockin mice, we report responses to periodic stretch. While WT cells largely maintained their F-actin cytoskeleton and contraction, mutant cells developed extensive and irrecoverable reductions in these same properties. This difference was attributable to both actin material changes and a more spatially correlated intracellular stress in mutant cells. When stretched cells were further challenged using a cell adhesion assay, mutant cells were more likely to detach. Together, these data suggest a mechanism for mutant podocyte dysfunction and loss in FSGS-it is a direct conseque...

Research paper thumbnail of Time-resolved microstructural changes in large amplitude oscillatory shear of model single and double component soft gels

Soft particulate gels can reversibly yield when sufficient deformation is applied, and the charac... more Soft particulate gels can reversibly yield when sufficient deformation is applied, and the characteristics of this transition can be enhanced or limited by designing hybrid hydrogel composites. While the microscopic dynamics and macroscopic rheology of these systems have been studied separately in detail, the development of direct connections between the two has been difficult, particularly with regard to the non-linear rheology. To bridge this gap, we perform a series of large amplitude oscillatory shear (LAOS) numerical measurements on model soft particulate gels at different volume fractions using coarse-grained molecular dynamics simulations. We first study a particulate network with local bending stiffness and then we combine it with a second component that can provide additional crosslinking to obtain two-component networks. Through the sequence of physical processes (SPP) framework we define time-resolved dynamic moduli and, by tracking the changes in these moduli through the period, we can distinguish transitions in the material behavior as a function of time. This approach helps us establish the microsopic origin of the non-linear rheology by connecting the changes in dynamics moduli to the corresponding microstructural changes during the deformation including the non-affine displacement of particles, and the breakage, formation, and orientation of bonds.

Research paper thumbnail of Microscopic interactions and emerging elasticity in model soft particulate gels

Journal of Physics: Condensed Matter, 2021

We discuss a class of models for particulate gels in which the particle contacts are described by... more We discuss a class of models for particulate gels in which the particle contacts are described by an effective interaction combining a two-body attraction and a three-body angular repulsion. Using molecular dynamics, we show how varying the model parameters allows us to sample, for a given gelation protocol, a variety of gel morphologies. For a specific set of the model parameters, we identify the local elastic structures that get interlocked in the gel network. Using the analytical expression of their elastic energy from the microscopic interactions, we can estimate their contribution to the emergent elasticity of the gel and gain new insight into its origin.

Research paper thumbnail of Hardening and Softening Materials: the role of network topology in soft gels

Research paper thumbnail of Linear viscoelastic spectra of soft particulate gels: master curve and physical origin of the fractal constitutive behavior

Bulletin of the American Physical Society, 2021

Research paper thumbnail of Competitive Supramolecular Associations Mediate the Viscoelasticity of Binary Hydrogels

ACS Central Science

Supramolecular polymers are known to form strong and resilient hydrogels which can take up large ... more Supramolecular polymers are known to form strong and resilient hydrogels which can take up large amounts of water while exhibiting ease of processing and self-healing. They also possess similarities with networks of biological macromolecules. The combination of these features makes supramolecular polymers ideal candidates for studying mechanisms and consequences of self-assembly, which are relevant to biological materials. At the same time, this renders investigations of mixed hydrogels based on different supramolecular compounds necessary, since this substantially widens their applicability. Here, we address unusual viscoelastic properties of a class of binary hydrogels made by mixing fibrillar supramolecular polymers that are formed from two compounds: 1,3,5-benzene-tricarboxamide decorated with aliphatic chains terminated by tetra(ethylene glycol) (BTA) and a 20 kg/ mol telechelic poly(ethylene glycol) decorated with the same hydrogen bonding BTA motif on both ends (BTA-PEG-BTA). Using a suite of experimental and simulation techniques, we find that the respective single-compound-based supramolecular systems form very different networks which exhibit drastically different rheology. More strikingly, mixing the compounds results in a nonmonotonic dependence of modulus and viscosity on composition, suggesting a competition between interactions of the two compounds, which can then be used to fine-tune the mechanical properties. Simulations offer insight into the nature of this competition and their remarkable qualitative agreement with the experimental results is promising for the design of mixed hydrogels with desired and tunable properties. Their combination with a sensitive dynamic probe (here rheology) offer a powerful toolbox to explore the unique properties of binary hydrogel mixtures.

Research paper thumbnail of Competitive Supramolecular Associations Mediate the Viscoelasticity of Binary Hydrogels

ACS Central Science

Supramolecular polymers are known to form strong and resilient hydrogels which can take up large ... more Supramolecular polymers are known to form strong and resilient hydrogels which can take up large amounts of water while exhibiting ease of processing and self-healing. They also possess similarities with networks of biological macromolecules. The combination of these features makes supramolecular polymers ideal candidates for studying mechanisms and consequences of self-assembly, which are relevant to biological materials. At the same time, this renders investigations of mixed hydrogels based on different supramolecular compounds necessary, since this substantially widens their applicability. Here, we address unusual viscoelastic properties of a class of binary hydrogels made by mixing fibrillar supramolecular polymers that are formed from two compounds: 1,3,5-benzene-tricarboxamide decorated with aliphatic chains terminated by tetra(ethylene glycol) (BTA) and a 20 kg/ mol telechelic poly(ethylene glycol) decorated with the same hydrogen bonding BTA motif on both ends (BTA-PEG-BTA). Using a suite of experimental and simulation techniques, we find that the respective single-compound-based supramolecular systems form very different networks which exhibit drastically different rheology. More strikingly, mixing the compounds results in a nonmonotonic dependence of modulus and viscosity on composition, suggesting a competition between interactions of the two compounds, which can then be used to fine-tune the mechanical properties. Simulations offer insight into the nature of this competition and their remarkable qualitative agreement with the experimental results is promising for the design of mixed hydrogels with desired and tunable properties. Their combination with a sensitive dynamic probe (here rheology) offer a powerful toolbox to explore the unique properties of binary hydrogel mixtures.

Research paper thumbnail of Competitive Supramolecular Associations Mediate the Viscoelasticity of Binary Hydrogels

ACS Central Science

Supramolecular polymers are known to form strong and resilient hydrogels which can take up large ... more Supramolecular polymers are known to form strong and resilient hydrogels which can take up large amounts of water while exhibiting ease of processing and self-healing. They also possess similarities with networks of biological macromolecules. The combination of these features makes supramolecular polymers ideal candidates for studying mechanisms and consequences of self-assembly, which are relevant to biological materials. At the same time, this renders investigations of mixed hydrogels based on different supramolecular compounds necessary, since this substantially widens their applicability. Here, we address unusual viscoelastic properties of a class of binary hydrogels made by mixing fibrillar supramolecular polymers that are formed from two compounds: 1,3,5-benzene-tricarboxamide decorated with aliphatic chains terminated by tetra(ethylene glycol) (BTA) and a 20 kg/ mol telechelic poly(ethylene glycol) decorated with the same hydrogen bonding BTA motif on both ends (BTA-PEG-BTA). Using a suite of experimental and simulation techniques, we find that the respective single-compound-based supramolecular systems form very different networks which exhibit drastically different rheology. More strikingly, mixing the compounds results in a nonmonotonic dependence of modulus and viscosity on composition, suggesting a competition between interactions of the two compounds, which can then be used to fine-tune the mechanical properties. Simulations offer insight into the nature of this competition and their remarkable qualitative agreement with the experimental results is promising for the design of mixed hydrogels with desired and tunable properties. Their combination with a sensitive dynamic probe (here rheology) offer a powerful toolbox to explore the unique properties of binary hydrogel mixtures.

Research paper thumbnail of Disease-causing mutation in α-actinin-4 promotes podocyte detachment through maladaptation to periodic stretch

Proceedings of the National Academy of Sciences of the United States of America, Jan 13, 2018

α-Actinin-4 (ACTN4) bundles and cross-links actin filaments to confer mechanical resilience to th... more α-Actinin-4 (ACTN4) bundles and cross-links actin filaments to confer mechanical resilience to the reconstituted actin network. How this resilience is built and dynamically regulated in the podocyte, and the cause of its failure in ACTN4 mutation-associated focal segmental glomerulosclerosis (FSGS), remains poorly defined. Using primary podocytes isolated from wild-type (WT) and FSGS-causing point mutant Actn4 knockin mice, we report responses to periodic stretch. While WT cells largely maintained their F-actin cytoskeleton and contraction, mutant cells developed extensive and irrecoverable reductions in these same properties. This difference was attributable to both actin material changes and a more spatially correlated intracellular stress in mutant cells. When stretched cells were further challenged using a cell adhesion assay, mutant cells were more likely to detach. Together, these data suggest a mechanism for mutant podocyte dysfunction and loss in FSGS-it is a direct conseque...