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Papers by Francesca Galea

Research paper thumbnail of Cross-host compatibility of commercial rhizobial strains for new and existing pasture legume cultivars in south-eastern Australia

Crop and Pasture Science

Perennial legumes have potential to increase pasture productivity in the high rainfall zone (600–... more Perennial legumes have potential to increase pasture productivity in the high rainfall zone (600–850 mm) of south-eastern Australia through their ability to use summer rainfall and fix nitrogen (N2). Various perennial legumes are being evaluated for this environment; however, little information exists on legume–rhizobia cross-host compatibility and its consequences for biological N2 fixation. This is especially important when legumes are sown into fields with a background of competitive rhizobia such as WSM1325 or sown as a pasture mix with different host–symbiont pairs. We studied the effectiveness and cross-host compatibility of five commercial rhizobial strains for a range of pasture legumes (nine species, 18 cultivars) under controlled environment conditions, and further evaluated nodule occupancy and competitiveness of a newly established pasture (13 species, 20 cultivars) in the field, by determining nodulation and production (biomass and N2 fixation). Three of the commercial ...

Research paper thumbnail of An epizootic of <i>Chlamydia psittaci</i> equine reproductive loss associated with suspected spillover from native Australian parrots

Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. p... more Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. psittaci strain was recently detected in an equine reproductive loss case associated with a subsequent cluster of human C. psittaci infections. In this study, we screened for C. psittaci in cases of equine reproductive loss reported in regional New South Wales, Australia during the 2016 foaling season. C. psittaci specific-PCR screening of foetal and placental tissue samples from cases of equine abortion (n = 161) and foals with compromised health status (n = 38) revealed C. psittaci positivity of 21.1% and 23.7%, respectively. There was a statistically significant geographical clustering of cases~170 km inland from the mid-coast of NSW (P < 0.001). Genomic analysis and molecular typing of C. psittaci positive samples from this study and the previous Australian equine index case revealed that the equine strains from different studs in regional NSW were clonal, while the phylogenetic analysis revealed that the C. psittaci strains from both Australian equine disease clusters belong to the parrot-associated 6BC clade, again indicative of spill-over of C. psittaci infections from native Australian parrots. The results of this work suggest that C. psittaci may be a more significant agent of equine reproductive loss than thought. A range of studies are now required to evaluate (a) the exact role that C. psittaci plays in equine reproductive loss; (b) the range of potential avian reservoirs and factors influencing infection spill-over; and (c) the risk that these equine infections pose to human health. is primarily linked to its established role as a globally distributed zoonotic pathogen 1-4. Inhalation is considered the main mode of pathogen entry with disease severity ranging from a subclinical infection, mild respiratory disease to life-threatening pneumonia and systemic psittacosis. While there have been rare reports of human-tohuman transmission of C. psittaci 5, 6 , contact with infected birds 7 or substrates contaminated with bird excreta 3, 8, 9 appears to be the major route of exposure and potential transmission. Despite its obligate requirement for a host during the replicative phase of its lifecycle, C. psittaci elementary bodies are known to persist in soil and water following shedding from infected birds 10 .

Research paper thumbnail of Fixing more N by improving inoculant performance in sub-optimal conditions

Research paper thumbnail of Soil moisture impacts nitrification from nitrogen fertilisers treated with 3,4-dimethylpyrazole phosphate in acidic soils

Soil Research, 2021

Context Success of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) is dependent... more Context Success of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) is dependent on a range of soil factors including pH and soil organic carbon (OC) content. Aims This study identified the effect of soil properties and moisture content at the time of DMPP application on the efficiency of DMPP and soil mineral N concentrations. Methods Soil was collected from paired paddocks with contrasting management, cropping or pasture across three sites. Soil samples were pre-incubated for 7 days with moist (−85 kPa) or air dried soil to simulate sowing into soil with moisture equivalents of post seasonal break or dry sowing. Urea ammonium nitrate (UAN) was applied with and without DMPP to all soils. Key results DMPP inhibited nitrification in all soils, although decreased inhibitory effectiveness was observed in acidic soils compared to neutral soils. Inhibition efficacy on acidic soils was improved when DMPP was applied to dry rather than wet soils. Neutral soils did not obse...

Research paper thumbnail of The distribution of soil nitrifiers and efficacy of 3,4-dimethylpyrazole phosphate changes with soil depth and calcium carbonate application

Soil Biology and Biochemistry, 2020

Research paper thumbnail of Multilocus sequence typing identifies an avian-like Chlamydia psittaci strain involved in equine placentitis and associated with subsequent human psittacosis

Emerging Microbes & Infections, 2017

Research paper thumbnail of An epizootic of Chlamydia psittaci equine reproductive loss associated with suspected spillover from native Australian parrots

Emerging microbes & infections, Jan 16, 2018

Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. p... more Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. psittaci strain was recently detected in an equine reproductive loss case associated with a subsequent cluster of human C. psittaci infections. In this study, we screened for C. psittaci in cases of equine reproductive loss reported in regional New South Wales, Australia during the 2016 foaling season. C. psittaci specific-PCR screening of foetal and placental tissue samples from cases of equine abortion (n = 161) and foals with compromised health status (n = 38) revealed C. psittaci positivity of 21.1% and 23.7%, respectively. There was a statistically significant geographical clustering of cases ~170 km inland from the mid-coast of NSW (P < 0.001). Genomic analysis and molecular typing of C. psittaci positive samples from this study and the previous Australian equine index case revealed that the equine strains from different studs in regional NSW were clonal, while the phylogenetic a...

Research paper thumbnail of The application of the comet assay to assess the genotoxicity of environmental pollutants in the nematode Caenorhabditis elegans

Environmental toxicology and pharmacology, Jan 20, 2016

This study aimed to establish a protocol for cell dissociation from the nematode Caenorhabditis e... more This study aimed to establish a protocol for cell dissociation from the nematode Caenorhabditis elegans (C. elegans) to assess the genotoxicity of the environmental pollutant benzo[a]pyrene (BaP) using the alkaline version of the single cell electrophoresis assay (comet assay). BaP genotoxicity was assessed in C. elegans (wild-type [WT]; N2, Bristol) after 48h exposure (0-40μM). Induction of comets by BaP was concentration-dependent up to 20μM; comet% tail DNA was ∼30% at 20μM BaP and ∼10% in controls. Similarly, BaP-induced DNA damage was evaluated in C. elegans mutant strains deficient in DNA repair. In xpa-1 and apn-1 mutants BaP-induced comet formation was diminished to WT background levels suggesting that the damage formed by BaP that is detected in the comet assay is not recognised in cells deficient in nucleotide and base excision repair, respectively. In summary, our study provides a protocol to evaluate DNA damage of environmental pollutants in whole nematodes using the com...

Research paper thumbnail of A comparative evaluation of the sensitivity of Salmonella detection on processed chicken carcasses using Australian and US methodologies: Sensitivity of Salmonella detection on processed chicken carcasses

Lett Appl Microbiol, 2007

Research paper thumbnail of Nosema ceranae infects honey bees ( Apis mellifera ) and contaminates honey in Australia

Apidologie, 2009

Polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) analysis and mic... more Polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) analysis and microscopy were used to test 307 adult bee and 37 honey samples collected in Australia for the presence of two microsporidia, Nosema ceranae and Nosema apis. N. ceranae was detected in samples from 4 states (Queensland, New South Wales, Victoria and South Australia) and was most commonly found in samples from Queensland where 28 (33.7%) of 83 samples were positive. New South Wales had the second highest prevalence with 15 (15.8%) of 95 samples positive. South Australia and Victoria had 4 (16%) of 25 and 2 (4.5%) of 44 samples positive respectively. N. ceranae was not detected in samples from Western Australia and Tasmania. N. apis was detected in samples from all states. Three honey samples (8.1%) were PCR positive for N. ceranae. These positive honey samples originated from beekeepers in Queensland. Six imported honey samples tested were negative for both Nosema spp. Nosema ceranae / Nosema apis / nosemosis / Apis mellifera / PCR / RFLP Corresponding author: M. Hornitzky

Research paper thumbnail of Integrating Survey and Molecular Approaches to Better Understand Wildlife Disease Ecology

PLoS ONE, 2012

Infectious wildlife diseases have enormous global impacts, leading to human pandemics, global bio... more Infectious wildlife diseases have enormous global impacts, leading to human pandemics, global biodiversity declines and socio-economic hardship. Understanding how infection persists and is transmitted in wildlife is critical for managing diseases, but our understanding is limited. Our study aim was to better understand how infectious disease persists in wildlife populations by integrating genetics, ecology and epidemiology approaches. Specifically, we aimed to determine whether environmental or host factors were stronger drivers of Salmonella persistence or transmission within a remote and isolated wild pig (Sus scrofa) population. We determined the Salmonella infection status of wild pigs. Salmonella isolates were genotyped and a range of data was collected on putative risk factors for Salmonella transmission. We a priori identified several plausible biological hypotheses for Salmonella prevalence (cross sectional study design) versus transmission (molecular case series study design) and fit the data to these models. There were 543 wild pig Salmonella observations, sampled at 93 unique locations. Salmonella prevalence was 41% (95% confidence interval [CI]: 37-45%). The median Salmonella DICE coefficient (or Salmonella genetic similarity) was 52% (interquartile range [IQR]: 42-62%). Using the traditional cross sectional prevalence study design, the only supported model was based on the hypothesis that abundance of available ecological resources determines Salmonella prevalence in wild pigs. In the molecular study design, spatial proximity and herd membership as well as some individual risk factors (sex, condition score and relative density) determined transmission between pigs. Traditional cross sectional surveys and molecular epidemiological approaches are complementary and together can enhance understanding of disease ecology: abundance of ecological resources critical for wildlife influences Salmonella prevalence, whereas Salmonella transmission is driven by local spatial, social, density and individual factors, rather than resources. This enhanced understanding has implications for the control of diseases in wildlife populations. Attempts to manage wildlife disease using simplistic density approaches do not acknowledge the complexity of disease ecology.

Research paper thumbnail of A comparative evaluation of the sensitivity of Salmonella detection on processed chicken carcasses using Australian and US methodologies

Letters in Applied Microbiology, 2007

Research paper thumbnail of Comparison of Four Techniques for the Detection of Clostridium Perfringens Type D Epsilon Toxin in Intestinal Contents and other Body Fluids of Sheep and Goats

Journal of Veterinary Diagnostic Investigation, 2003

Four serological methods were compared and evaluated for use in detecting cytomegalovirus antibod... more Four serological methods were compared and evaluated for use in detecting cytomegalovirus antibody in blood and organ donors. Western blotting (immunoblotting), latex agglutination, enzyme-linked immunosorbent assay, and a recent available microparticle enzyme immunosorbent assay were used. The microparticle enzyme immunoassay appears to compare favorably with each of the other three assays tested for screening blood and organ donors for a previous cytomegalovirus infection.

Research paper thumbnail of High-Throughput Direct Fecal PCR Assay for Detection of Mycobacterium avium subsp. paratuberculosis in Sheep and Cattle

Journal of Clinical Microbiology, 2014

Research paper thumbnail of Salmonella infection in a remote, isolated wild pig population

Veterinary Microbiology, 2013

Research paper thumbnail of Cross-host compatibility of commercial rhizobial strains for new and existing pasture legume cultivars in south-eastern Australia

Crop and Pasture Science

Perennial legumes have potential to increase pasture productivity in the high rainfall zone (600–... more Perennial legumes have potential to increase pasture productivity in the high rainfall zone (600–850 mm) of south-eastern Australia through their ability to use summer rainfall and fix nitrogen (N2). Various perennial legumes are being evaluated for this environment; however, little information exists on legume–rhizobia cross-host compatibility and its consequences for biological N2 fixation. This is especially important when legumes are sown into fields with a background of competitive rhizobia such as WSM1325 or sown as a pasture mix with different host–symbiont pairs. We studied the effectiveness and cross-host compatibility of five commercial rhizobial strains for a range of pasture legumes (nine species, 18 cultivars) under controlled environment conditions, and further evaluated nodule occupancy and competitiveness of a newly established pasture (13 species, 20 cultivars) in the field, by determining nodulation and production (biomass and N2 fixation). Three of the commercial ...

Research paper thumbnail of An epizootic of <i>Chlamydia psittaci</i> equine reproductive loss associated with suspected spillover from native Australian parrots

Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. p... more Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. psittaci strain was recently detected in an equine reproductive loss case associated with a subsequent cluster of human C. psittaci infections. In this study, we screened for C. psittaci in cases of equine reproductive loss reported in regional New South Wales, Australia during the 2016 foaling season. C. psittaci specific-PCR screening of foetal and placental tissue samples from cases of equine abortion (n = 161) and foals with compromised health status (n = 38) revealed C. psittaci positivity of 21.1% and 23.7%, respectively. There was a statistically significant geographical clustering of cases~170 km inland from the mid-coast of NSW (P < 0.001). Genomic analysis and molecular typing of C. psittaci positive samples from this study and the previous Australian equine index case revealed that the equine strains from different studs in regional NSW were clonal, while the phylogenetic analysis revealed that the C. psittaci strains from both Australian equine disease clusters belong to the parrot-associated 6BC clade, again indicative of spill-over of C. psittaci infections from native Australian parrots. The results of this work suggest that C. psittaci may be a more significant agent of equine reproductive loss than thought. A range of studies are now required to evaluate (a) the exact role that C. psittaci plays in equine reproductive loss; (b) the range of potential avian reservoirs and factors influencing infection spill-over; and (c) the risk that these equine infections pose to human health. is primarily linked to its established role as a globally distributed zoonotic pathogen 1-4. Inhalation is considered the main mode of pathogen entry with disease severity ranging from a subclinical infection, mild respiratory disease to life-threatening pneumonia and systemic psittacosis. While there have been rare reports of human-tohuman transmission of C. psittaci 5, 6 , contact with infected birds 7 or substrates contaminated with bird excreta 3, 8, 9 appears to be the major route of exposure and potential transmission. Despite its obligate requirement for a host during the replicative phase of its lifecycle, C. psittaci elementary bodies are known to persist in soil and water following shedding from infected birds 10 .

Research paper thumbnail of Fixing more N by improving inoculant performance in sub-optimal conditions

Research paper thumbnail of Soil moisture impacts nitrification from nitrogen fertilisers treated with 3,4-dimethylpyrazole phosphate in acidic soils

Soil Research, 2021

Context Success of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) is dependent... more Context Success of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) is dependent on a range of soil factors including pH and soil organic carbon (OC) content. Aims This study identified the effect of soil properties and moisture content at the time of DMPP application on the efficiency of DMPP and soil mineral N concentrations. Methods Soil was collected from paired paddocks with contrasting management, cropping or pasture across three sites. Soil samples were pre-incubated for 7 days with moist (−85 kPa) or air dried soil to simulate sowing into soil with moisture equivalents of post seasonal break or dry sowing. Urea ammonium nitrate (UAN) was applied with and without DMPP to all soils. Key results DMPP inhibited nitrification in all soils, although decreased inhibitory effectiveness was observed in acidic soils compared to neutral soils. Inhibition efficacy on acidic soils was improved when DMPP was applied to dry rather than wet soils. Neutral soils did not obse...

Research paper thumbnail of The distribution of soil nitrifiers and efficacy of 3,4-dimethylpyrazole phosphate changes with soil depth and calcium carbonate application

Soil Biology and Biochemistry, 2020

Research paper thumbnail of Multilocus sequence typing identifies an avian-like Chlamydia psittaci strain involved in equine placentitis and associated with subsequent human psittacosis

Emerging Microbes & Infections, 2017

Research paper thumbnail of An epizootic of Chlamydia psittaci equine reproductive loss associated with suspected spillover from native Australian parrots

Emerging microbes & infections, Jan 16, 2018

Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. p... more Chlamydia psittaci is an avian pathogen capable of spill-over infections to humans. A parrot C. psittaci strain was recently detected in an equine reproductive loss case associated with a subsequent cluster of human C. psittaci infections. In this study, we screened for C. psittaci in cases of equine reproductive loss reported in regional New South Wales, Australia during the 2016 foaling season. C. psittaci specific-PCR screening of foetal and placental tissue samples from cases of equine abortion (n = 161) and foals with compromised health status (n = 38) revealed C. psittaci positivity of 21.1% and 23.7%, respectively. There was a statistically significant geographical clustering of cases ~170 km inland from the mid-coast of NSW (P < 0.001). Genomic analysis and molecular typing of C. psittaci positive samples from this study and the previous Australian equine index case revealed that the equine strains from different studs in regional NSW were clonal, while the phylogenetic a...

Research paper thumbnail of The application of the comet assay to assess the genotoxicity of environmental pollutants in the nematode Caenorhabditis elegans

Environmental toxicology and pharmacology, Jan 20, 2016

This study aimed to establish a protocol for cell dissociation from the nematode Caenorhabditis e... more This study aimed to establish a protocol for cell dissociation from the nematode Caenorhabditis elegans (C. elegans) to assess the genotoxicity of the environmental pollutant benzo[a]pyrene (BaP) using the alkaline version of the single cell electrophoresis assay (comet assay). BaP genotoxicity was assessed in C. elegans (wild-type [WT]; N2, Bristol) after 48h exposure (0-40μM). Induction of comets by BaP was concentration-dependent up to 20μM; comet% tail DNA was ∼30% at 20μM BaP and ∼10% in controls. Similarly, BaP-induced DNA damage was evaluated in C. elegans mutant strains deficient in DNA repair. In xpa-1 and apn-1 mutants BaP-induced comet formation was diminished to WT background levels suggesting that the damage formed by BaP that is detected in the comet assay is not recognised in cells deficient in nucleotide and base excision repair, respectively. In summary, our study provides a protocol to evaluate DNA damage of environmental pollutants in whole nematodes using the com...

Research paper thumbnail of A comparative evaluation of the sensitivity of Salmonella detection on processed chicken carcasses using Australian and US methodologies: Sensitivity of Salmonella detection on processed chicken carcasses

Lett Appl Microbiol, 2007

Research paper thumbnail of Nosema ceranae infects honey bees ( Apis mellifera ) and contaminates honey in Australia

Apidologie, 2009

Polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) analysis and mic... more Polymerase chain reaction (PCR), restriction fragment length polymorphism (RFLP) analysis and microscopy were used to test 307 adult bee and 37 honey samples collected in Australia for the presence of two microsporidia, Nosema ceranae and Nosema apis. N. ceranae was detected in samples from 4 states (Queensland, New South Wales, Victoria and South Australia) and was most commonly found in samples from Queensland where 28 (33.7%) of 83 samples were positive. New South Wales had the second highest prevalence with 15 (15.8%) of 95 samples positive. South Australia and Victoria had 4 (16%) of 25 and 2 (4.5%) of 44 samples positive respectively. N. ceranae was not detected in samples from Western Australia and Tasmania. N. apis was detected in samples from all states. Three honey samples (8.1%) were PCR positive for N. ceranae. These positive honey samples originated from beekeepers in Queensland. Six imported honey samples tested were negative for both Nosema spp. Nosema ceranae / Nosema apis / nosemosis / Apis mellifera / PCR / RFLP Corresponding author: M. Hornitzky

Research paper thumbnail of Integrating Survey and Molecular Approaches to Better Understand Wildlife Disease Ecology

PLoS ONE, 2012

Infectious wildlife diseases have enormous global impacts, leading to human pandemics, global bio... more Infectious wildlife diseases have enormous global impacts, leading to human pandemics, global biodiversity declines and socio-economic hardship. Understanding how infection persists and is transmitted in wildlife is critical for managing diseases, but our understanding is limited. Our study aim was to better understand how infectious disease persists in wildlife populations by integrating genetics, ecology and epidemiology approaches. Specifically, we aimed to determine whether environmental or host factors were stronger drivers of Salmonella persistence or transmission within a remote and isolated wild pig (Sus scrofa) population. We determined the Salmonella infection status of wild pigs. Salmonella isolates were genotyped and a range of data was collected on putative risk factors for Salmonella transmission. We a priori identified several plausible biological hypotheses for Salmonella prevalence (cross sectional study design) versus transmission (molecular case series study design) and fit the data to these models. There were 543 wild pig Salmonella observations, sampled at 93 unique locations. Salmonella prevalence was 41% (95% confidence interval [CI]: 37-45%). The median Salmonella DICE coefficient (or Salmonella genetic similarity) was 52% (interquartile range [IQR]: 42-62%). Using the traditional cross sectional prevalence study design, the only supported model was based on the hypothesis that abundance of available ecological resources determines Salmonella prevalence in wild pigs. In the molecular study design, spatial proximity and herd membership as well as some individual risk factors (sex, condition score and relative density) determined transmission between pigs. Traditional cross sectional surveys and molecular epidemiological approaches are complementary and together can enhance understanding of disease ecology: abundance of ecological resources critical for wildlife influences Salmonella prevalence, whereas Salmonella transmission is driven by local spatial, social, density and individual factors, rather than resources. This enhanced understanding has implications for the control of diseases in wildlife populations. Attempts to manage wildlife disease using simplistic density approaches do not acknowledge the complexity of disease ecology.

Research paper thumbnail of A comparative evaluation of the sensitivity of Salmonella detection on processed chicken carcasses using Australian and US methodologies

Letters in Applied Microbiology, 2007

Research paper thumbnail of Comparison of Four Techniques for the Detection of Clostridium Perfringens Type D Epsilon Toxin in Intestinal Contents and other Body Fluids of Sheep and Goats

Journal of Veterinary Diagnostic Investigation, 2003

Four serological methods were compared and evaluated for use in detecting cytomegalovirus antibod... more Four serological methods were compared and evaluated for use in detecting cytomegalovirus antibody in blood and organ donors. Western blotting (immunoblotting), latex agglutination, enzyme-linked immunosorbent assay, and a recent available microparticle enzyme immunosorbent assay were used. The microparticle enzyme immunoassay appears to compare favorably with each of the other three assays tested for screening blood and organ donors for a previous cytomegalovirus infection.

Research paper thumbnail of High-Throughput Direct Fecal PCR Assay for Detection of Mycobacterium avium subsp. paratuberculosis in Sheep and Cattle

Journal of Clinical Microbiology, 2014

Research paper thumbnail of Salmonella infection in a remote, isolated wild pig population

Veterinary Microbiology, 2013