Jeanine Olsen - Academia.edu (original) (raw)

Papers by Jeanine Olsen

Research paper thumbnail of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)

BMC Evolutionary Biology, 2018

Background: The spatial distribution of genetic diversity and structure has important implication... more Background: The spatial distribution of genetic diversity and structure has important implications for conservation as it reveals a species' strong and weak points with regard to stability and evolutionary capacity. Temporal genetic stability is rarely tested in marine species other than commercially important fishes, but is crucial for the utility of temporal snapshots in conservation management. High and stable diversity can help to mitigate the predicted northward range shift of seaweeds under the impact of climate change. Given the key ecological role of fucoid seaweeds along rocky shores, the positive effect of genetic diversity may reach beyond the species level to stabilize the entire intertidal ecosystem along the temperate North Atlantic. In this study, we estimated the effective population size, as well as temporal changes in genetic structure and diversity of the seaweed F. serratus using 22 microsatellite markers. Samples were taken across latitudes and a range of temperature regimes at seven locations with decadal sampling (2000 and 2010). Results: Across latitudes, genetic structure and diversity remained stable over 5-10 generations. Stable small-scale structure enhanced regional diversity throughout the species' range. In accordance with its biogeographic history, effective population size and diversity peaked in the species' mid-range in Brittany (France), and declined towards its leading and trailing edge to the north and south. At the species' southern edge, multi-locus-heterozygosity displayed a strong decline from 1999 to 2010. Conclusion: Temporally stable genetic structure over small spatial scales is a potential driver for local adaptation and species radiation in the genus Fucus. Survival and adaptation of the low-diversity leading edge of F. serratus may be enhanced by regional gene flow and 'surfing' of favorable mutations or impaired by the accumulation of deleterious mutations. Our results have clear implications for the conservation of F. serratus at its genetically unique southern edge in Northwest Iberia, where increasing temperatures are likely the major cause for the decline not only of F. serratus, but also other intertidal and subtidal macroalgae. We expect that F. serratus will disappear from Northwest Iberia by 2100 if genetic rescue is not induced by the influx of genetic variation from Brittany.

Research paper thumbnail of Eelgrass Meadows in the California Channel Islands and Adjacent Coast Reveal a Mosaic of Two Species, Evidence for Introgression and Variable Clonality

Annals of Botany, 2007

Background and Aims Seagrasses are important facilitator species in shallow, soft-bottom marine e... more Background and Aims Seagrasses are important facilitator species in shallow, soft-bottom marine environments worldwide and, in many places, are threatened by coastal development and eutrophication. One narrow-leaved species (Zostera marina) and one wide-leaved species, variously designated as Z. marina, Z. pacifica or Z. asiatica, are found off the California Channel Islands and adjacent California-Mexico coast. The aim of the present study was to confirm species identification genetically and to link patterns of genetic diversity, connectivity and hybridization among and within the populations with historical sea levels (Ice Age) or the contemporary environment. † Methods Samples (n ¼ 11-100) were collected from 28 sites off five California Channel Islands and six sites off the adjacent coast of southern California and Baja California, Mexico. DNA polymorphisms of the rDNA-ITS (internal transcribed spacer) cistron (nuclear), the matK intron (chloroplast) and nine microsatellite loci (nuclear) were examined in a population genetic and phylogeographic context. † Key Results All wide-leaved individuals were Z. pacifica, whereas narrow-leaved forms were Z. marina. Microsatellite genotypes were consistent with hybridization between the two species in three populations. The present distribution of Z. pacifica follows a glacial age land mass rather than present oceanographic regimes, but no link was observed between the present distribution of Z. marina and past or present environments. Island populations of Z. marina often were clonal and characterized by low genotypic diversity compared with populations along the Baja California coast. The high level of clonal connectivity around Santa Catalina Island indicated the importance of dispersal and subsequent re-establishment of vegetative fragments. † Conclusions The pristine environmental conditions of offshore islands do not guarantee maximum genetic diversity. Future restoration and transplantation efforts of seagrasses must recognize cryptic species and consider the degree of both genetic and genotypic variation in candidate donor populations.

Research paper thumbnail of Numerous mitigation transplants of the eelgrass Zostera marina in southern California shuffle genetic diversity and may promote hybridization with Zostera pacifica

Biological Conservation, 2014

Intensive human pressures along the southern California coast have led to >50 mitigation transpla... more Intensive human pressures along the southern California coast have led to >50 mitigation transplants of eelgrass over the past 30 years. We analyzed diversity and population structure of Zostera marina and Zostera pacifica at 36 locations to identify potential management units and further develop transplant guidelines. Normalized allelic diversity of Z. marina was uniformly moderate to high (4.78; 3.48-6.44) and nearly twofold higher than mainland Z. pacifica (2.70; 1.74-4.89). More than half of the Z. marina populations exhibited strongly significant inbreeding coefficients coupled with strong linkage disequilibrium attributable to transplant effects; neither attribute was found in Z. pacifica. Both species were characterized by high genotypic diversity and an absence of large clones. A Bayesian analysis of population structure suggested 6 potential management units for Z. marina and 3 for Z. pacifica; some units included disjunct locations associated with transplants. Hybridization between Z. marina and Z. pacifica was documented at Newport Bay Entrance Channel and south San Diego Bay. The presence of two species requires management plans for each, as well as avoidance of potential transplant-induced hybridization. Although transplant admixtures elevate diversity, shuffling among locations may potentially reduce the genetic potential necessary to ensure rapid adaptation, even though overall transplant success has been successful. Given that transplants will continue (from both plants and seeds), we recommend that the current requirement for ''two additional distinct donor sites'' be restricted to within a management unit for small, routine mitigations and expanded to among-management units for wholesale de novo restorations.

Research paper thumbnail of Climate change impact on seaweed meadow distribution in the North Atlantic rocky intertidal

Ecology and evolution, 2013

The North-Atlantic has warmed faster than all other ocean basins and climate change scenarios pre... more The North-Atlantic has warmed faster than all other ocean basins and climate change scenarios predict sea surface temperature isotherms to shift up to 600 km northwards by the end of the 21st century. The pole-ward shift has already begun for many temperate seaweed species that are important intertidal foundation species. We asked the question: Where will climate change have the greatest impact on three foundational, macroalgal species that occur along North-Atlantic shores: Fucus serratus, Fucus vesiculosus, and Ascophyllum nodosum? To predict distributional changes of these key species under three IPCC (Intergovernmental Panel on Climate Change) climate change scenarios (A2, A1B, and B1) over the coming two centuries, we generated Ecological Niche Models with the program MAXENT. Model predictions suggest that these three species will shift northwards as an assemblage or "unit" and that phytogeographic changes will be most pronounced in the southern Arctic and the souther...

Research paper thumbnail of A dated molecular phylogeny of manta and devil rays (Mobulidae) based on mitogenome and nuclear sequences

Molecular Phylogenetics and Evolution, 2015

Manta and devil rays are an iconic group of globally distributed pelagic filter feeders, yet thei... more Manta and devil rays are an iconic group of globally distributed pelagic filter feeders, yet their evolutionary history remains enigmatic. We employed next generation sequencing of mitogenomes for nine of the 11 recognized species and two outgroups; as well as additional Sanger sequencing of two mitochondrial and two nuclear genes in an extended taxon sampling set. Analysis of the mitogenome coding regions in a Maximum Likelihood and Bayesian framework provided a well-resolved phylogeny. The deepest divergences distinguished three clades with high support, one containing Manta birostris, Manta alfredi, Mobula tarapacana, Mobula japanica and Mobula mobular; one containing Mobula kuhlii, Mobula eregoodootenkee and Mobula thurstoni; and one containing Mobula munkiana, Mobula hypostoma and Mobula rochebrunei. Mobula remains paraphyletic with the inclusion of Manta, a result that is in agreement with previous studies based on molecular and morphological data. A fossil-calibrated Bayesian random local clock analysis suggests that mobulids diverged from Rhinoptera around 30 Mya. Subsequent divergences are characterized by long internodes followed by short bursts of speciation extending from an initial episode of divergence in the Early and Middle Miocene (19-17 Mya) to a second episode during the Pliocene and Pleistocene (3.6 Mya-recent). Estimates of divergence dates overlap significantly with periods of global warming, during which upwelling intensity-and related high primary productivity in upwelling regions-decreased markedly. These periods are hypothesized to have led to fragmentation and isolation of feeding regions leading to possible regional extinctions, as well as the promotion of allopatric speciation. The closely shared evolutionary history of mobulids in combination with ongoing threats from fisheries and climate change effects on upwelling and food supply, reinforces the case for greater protection of this charismatic family of pelagic filter feeders.

Research paper thumbnail of Stress Ecology in Fucus: Abiotic, Biotic and Genetic Interactions

Advances in Marine Biology, Vol 59, 2011

This chapter was originally published in the book Advances in Marine Biology. The copy attached i... more This chapter was originally published in the book Advances in Marine Biology. The copy attached is provided by Elsevier for the author's benefit and for the benefit of the author's institution, for noncommercial research, and educational use. This includes without limitation use in instruction at your institution, distribution to specific colleagues, and providing a copy to your institution's administrator. All other uses, reproduction and distribution, including without limitation commercial reprints, selling or licensing copies or access, or posting on open internet sites, your personal or institution's website or repository, are prohibited. For exceptions, permission may be sought for such use through Elsevier's

Research paper thumbnail of The most vagile host as the main determinant of population connectivity in marine macroparasites

Marine Ecology Progress Series, 2015

Research paper thumbnail of Historical invasions of the intertidal zone of Atlantic North America associated with distinctive patterns of trade and emigration

Proceedings of the National Academy of Sciences, 2009

Early invasions of the North American shore occurred mainly via deposition of ballast rock, which... more Early invasions of the North American shore occurred mainly via deposition of ballast rock, which effectively transported pieces of the intertidal zone across the Atlantic. From 1773–1861, >880 European ships entered Pictou Harbor, Nova Scotia, as a result of emigration and trade from Europe. The rockweed Fucus serratus (1868) and the snail Littorina littorea (≈1840) were found in Pictou during this same period. With shipping records (a proxy for propagule pressure) to guide sampling, we used F. serratus as a model to examine the introductions because of its relatively low genetic diversity and dispersal capability. Microsatellite markers and assignment tests revealed 2 introductions of the rockweed into Nova Scotia: 1 from Galway (Ireland) to Pictou and the other from Greenock (Scotland) to western Cape Breton Island. To examine whether a high-diversity, high-dispersing species might have similar pathways of introduction, we analyzed L. littorea , using cytochrome b haplotypes. ...

Research paper thumbnail of Evolution and diversification within the intertidal brown macroalgae Fucus spiralis/F. vesiculosus species complex in the North Atlantic

Molecular Phylogenetics and Evolution, 2011

We examined 733 individuals of Fucus spiralis from 21 locations and 1093 Fucus vesiculosus indivi... more We examined 733 individuals of Fucus spiralis from 21 locations and 1093 Fucus vesiculosus individuals from 37 locations throughout their northern hemisphere ranges using nuclear and mitochondrial markers. Three genetic entities of F. spiralis were recovered. In northern and sympatric populations, the presence of ''F. spiralis Low'' in the mid-intertidal and ''F. spiralis High'' in the high-intertidal was confirmed and both co-occurred with the sister species F. vesiculosus. The third and newly-discovered entity, ''F. spiralis South'', was present mainly in the southern range, where it did not co-occur with F. vesiculosus. The South entity diverged early in allopatry, then hybridized with F. vesiculosus in sympatry to produce F. spiralis Low. Ongoing parallel evolution of F. spiralis Low and F. spiralis High is most likely due to habitat preference/local selection and maintained by preferentially selfing reproductive strategies. Contemporary populations of F. spiralis throughout the North Atlantic stem from a glacial refugium around Brittany involving F. spiralis High; F. spiralis South was probably unaffected by glacial episodes. Exponential population expansion for F. vesiculosus began during the Cromer and/Holstein interglacial period (300,000-200,000 yrs BP). Following the last glacial maximum (30,000-22,000 yrs BP), a single mtDNA haplotype from a glacial refugium in SW Ireland colonized Scandinavia, the Central Atlantic islands, and the W Atlantic.

Research paper thumbnail of A mtDNA-based phylogeny of the brown algal genus Fucus (Heterokontophyta; Phaeophyta)

Molecular Phylogenetics and Evolution, 2006

Species of Fucus are among the dominant seaweeds along Northern Hemisphere shores, but taxonomic ... more Species of Fucus are among the dominant seaweeds along Northern Hemisphere shores, but taxonomic designations often are confounded by signiWcant intraspeciWc morphological variability. We analyzed intra-and inter-speciWc phylogenetic relationships within the genus (275 individuals representing 16 taxa) using two regions of the mitochondrion: a variable intergenic spacer and a conserved portion of the 23S subunit. Bayesian ML and MP analyses veriWed a shallow phylogeny with two major lineages (previously reported) and resolved some intra-lineage relationships. SigniWcant species-level paraphyly/polyphyly was observed within lineages 1A and 2. Despite higher species richness in the North Atlantic, a North PaciWc origin of the genus is supported by a gradient of decreasing haplotype and nucleotide diversities in F. distichus from the North PaciWc to the East Atlantic.

Research paper thumbnail of North Atlantic phylogeography and large-scale population differentiation of the seagrass Zostera marina L

Molecular Ecology, 2004

As the most widespread seagrass in temperate waters of the Northern Hemisphere, Zostera marina pr... more As the most widespread seagrass in temperate waters of the Northern Hemisphere, Zostera marina provides a unique opportunity to investigate the extent to which the historical legacy of the last glacial maximum (LGM18 000-10 000 years BP) is detectable in modern population genetic structure. We used sequences from the nuclear rDNA-internal transcribed spacer (ITS) and chloroplast mat K-intron, and nine microsatellite loci to survey 49 populations (> 2000 individuals) from throughout the species' range. Minimal sequence variation between Pacific and Atlantic populations combined with biogeographical groupings derived from the microsatellite data, suggest that the trans-Arctic connection is currently open. The east Pacific and west Atlantic are more connected than either is to the east Atlantic. Allelic richness was almost twofold higher in the Pacific. Populations from putative Atlantic refugia now represent the southern edges of the distribution and are not genetically diverse. Unexpectedly, the highest allelic diversity was observed in the North Sea-Wadden Sea-southwest Baltic region. Except for the Mediterranean and Black Seas, significant isolation-by-distance was found from ~150 to 5000 km. A transition from weak to strong isolation-by-distance occurred at ~150 km among northern European populations suggesting this scale as the natural limit for dispersal within the metapopulation. Links between historical and contemporary processes are discussed in terms of the projected effects of climate change on coastal marine plants. The identification of a high genetic diversity hotspot in Northern Europe provides a basis for restoration decisions.

Research paper thumbnail of Glacial refugia and recolonization pathways in the brown seaweedFucus serratus

Molecular Ecology, 2007

The last glacial maximum (20 000-18 000 years ago) dramatically affected extant distributions of ... more The last glacial maximum (20 000-18 000 years ago) dramatically affected extant distributions of virtually all northern European biota. Locations of refugia and postglacial recolonization pathways were examined in Fucus serratus (Heterokontophyta; Fucaceae) using a highly variable intergenic spacer developed from the complete mitochondrial genome of Fucus vesiculosus. Over 1500 samples from the entire range of F. serratus were analysed using fluorescent single strand conformation polymorphism. A total of 28 mtDNA haplotypes was identified and sequenced. Three refugia were recognized based on high haplotype diversities and the presence of endemic haplotypes: southwest Ireland, the northern Brittany-Hurd Deep area of the English Channel, and the northwest Iberian Peninsula. The Irish refugium was the source for a recolonization sweep involving a single haplotype via northern Scotland and throughout Scandinavia, whereas recolonization from the Brittany-Hurd Deep refugium was more limited, probably because of unsuitable soft-bottom habitat in the Bay of Biscay and along the Belgian and Dutch coasts. The Iberian populations reflect a remnant refugium at the present-day southern boundary of the species range. A generalized skyline plot suggested exponential population expansion beginning in the mid-Pleistocene with maximal growth during the Eems interglacial 128 000-67 000 years ago, implying that the last glacial maximum mainly shaped population distributions rather than demography.

Research paper thumbnail of Phylogeography and population structure of thornback rays (Raja clavata L., Rajidae)

Molecular Ecology, 2006

The phylogeography of thornback rays (Raja clavata) was assessed from European waters, using five... more The phylogeography of thornback rays (Raja clavata) was assessed from European waters, using five nuclear microsatellite loci and mitochondrial cytochome b sequences. Strong regional differentiation was found between the Mediterranean basin, the Azores and the European continental shelf. Allelic and haplotype diversities were high in Portuguese populations, consistent with the existence of a refugium along the Iberian Peninsula. Unexpectedly, high diversity was also found in the English Channel/North Sea area. The lowest genetic diversity was found in the Black Sea. Populations sampled from the Mediterranean, Adriatic and Black Seas were characterized by a single mitochondrial haplotype. This haplotype was also the most ancestral and widespread outside of the Mediterranean basin except for the Azores. Populations from the Azores were dominated by a second ancestral haplotype which was shared with British populations. Results from multidimensional scaling, amova and nested clade analysis indicate that British waters are a secondary contact zone recolonized from at least two refugia-one around the Iberian Peninsula and one possibly in the Azores. Links to a potential refugium known as the Hurd Deep, between Cornwall and Brittany, are discussed. Finally, a historical demographic analysis indicates that thornback ray populations started to expand between 580 000 and 362 000 years ago, which suggests that the Last Glacial Maximum (20 000 years ago) had mainly affected the distribution of populations rather than population size.

Research paper thumbnail of Thermal stress resistance of the brown alga Fucus serratus along the North-Atlantic coast: Acclimatization potential to climate change

Marine Genomics, 2014

Seaweed-dominated communities are predicted to disappear south of 45°latitude on North-Atlantic r... more Seaweed-dominated communities are predicted to disappear south of 45°latitude on North-Atlantic rocky shores by 2200 because of climate change. The extent of predicted habitat loss, however, could be mitigated if the seaweeds' physiology is sufficiently plastic to rapidly acclimatize to the warmer temperatures. The main objectives of this study were to identify whether the thermal tolerance of the canopy-forming seaweed Fucus serratus is population-specific and where temperatures are likely to exceed its tolerance limits in the next 200 years. We measured the stress response of seaweed samples from four populations (Norway, Denmark, Brittany and Spain) to common-garden heat stress (20°C-36°C) in both photosynthetic performance and transcriptomic upregulation of heat shock protein genes. The two stress indicators did not correlate and likely measured different cellular components of the stress response, but both indicators revealed populationspecific differences, suggesting ecotypic differentiation. Our results confirmed that thermal extremes will regularly reach physiologically stressful levels in Brittany (France) and further south by the end of the 22nd century. Although heat stress resilience in photosynthetic performance was higher at the species' southern distributional edge in Spain, the hsp expression pattern suggested that this edge-population experienced reduced fitness and limited responsiveness to further stressors. Thus, F. serratus may be unable to mitigate its predicted northward shift and may be at high risk to lose its center of genetic diversity and adaptability in Brittany (France). As it is an important intertidal key species, the disappearance of this seaweed will likely trigger major ecological changes in the entire associated ecosystem.

Research paper thumbnail of Population genetics of dwarf eelgrass Zostera noltii throughout its biogeographic range

Marine Ecology Progress Series, 2004

The marine angiosperm Zostera noltii (dwarf eelgrass), an important facilitator species and food ... more The marine angiosperm Zostera noltii (dwarf eelgrass), an important facilitator species and food source for invertebrates and waterfowl, predominantly inhabits intertidal habitats along eastern Atlantic shores from Mauritania to southern Norway/Kattegat Sea and throughout the Mediterranean, Black and Azov seas. We used 9 microsatellite loci to characterize population structure at a variety of spatial scales among 33 populations from 11 localities throughout the entire biogeographic range. Isolation by distance analysis suggested a panmictic genetic neighborhood of 100 to 150 km. At the global scale, a neighbor-joining tree based on Reynolds distances revealed strongly-supported groups corresponding to northern Europe, Mauritania and the Black/Azov Sea; separate Mediterranean and Atlantic-Iberian groups were poorly supported. Clones (genets with multiple ramets) were present in most populations but were generally small (ca. < 3 m 2). Exceptions were found in Mauritania (ca. 29 m in length), the Azov Sea (ca. 40 m in length) and the Black Sea (ca. 50 m in length). Although genetic diversity and allelic richness generally decreased from Mauritania to Denmark, the putative post-glacial recolonization route, both were unexpectedly high among populations from the German Wadden Sea.

Research paper thumbnail of Eelgrass Zostera marina populations in northern Norwegian fjords are genetically isolated and diverse

Marine Ecology Progress Series, 2013

Populations along the northern boundary of a marine species' distributional range in the NE Atlan... more Populations along the northern boundary of a marine species' distributional range in the NE Atlantic are expected to harbor lower standing genetic variation as a consequence of postglacial expansion following the last glacial maximum. Founder events and marginal habitat availability may render the edge populations more vulnerable to anthropogenic stress and less capable of rapid adaptation to global climate change, a concern for conservation and management. We analyzed meadow architecture, persistence and connectivity within and among 15 locations (600 samples genotyped with 8 microsatellite loci) in 3 fjords in Troms County, Norway (69°N). Whereas global mean allelic diversity (standardized for sample size) was in accordance with previous studies using the same markers, more extensive sampling revealed a broader range of allelic richness (mean = 2.85; range = 1.84 to 4.21) in the regional pool. Genotypic diversity was typically high, whereas large genets were rare (2 out of 15 locations). Population differentiation (F ST) was 2 to 6 times higher between fjords than within fjords. A Bayesian (STRUCTURE) analysis also strongly supported the genetic distinctness of each fjord. Although 9 locations within the 60 km long Balsfjord were connected by gene flow, demographic connectivity may actually be low, as fixed differences were observed at 6 of the 9 locations, along with significantly positive inbreeding coefficients and strong substructure. Overall, our results suggest that these northern, leading-edge meadows are healthy, but vigilance is required to avoid further losses. Fjord-level management, especially of the larger fjords, will be sufficient to capture the range of variation.

Research paper thumbnail of Population genetics of Zostera noltii along the west Iberian coast: consequences of small population size, habitat discontinuity and near-shore currents

Marine Ecology Progress Series, 2005

The effects of oceanographic patterns on marine genetic biodiversity along the SW Iberian Peninsu... more The effects of oceanographic patterns on marine genetic biodiversity along the SW Iberian Peninsula are poorly understood. We addressed the question of whether gene flow in this region depends solely on geographic distance between isolated patches of suitable habitat or if there are superimposed effects correlated with other factors such as current patterns. Zostera noltii, the dwarf eelgrass, is the keystone habitat-structuring seagrass species on intertidal mudflats along the Iberian west coast. We used 9 microsatellite loci to analyze population genetic diversity and differentiation for all existing 8 populations from NW Spain (Ria de Vigo) to SW Spain (Puerto Real, Cadiz). Populations are highly genetically differentiated as shown by high significant F ST ,Wright's fixation index, (0.08 to 0.26) values. A neighbor-joining tree based on Reynold's distances computed from allele frequencies revealed a split between northern and southern populations (bootstrap support of 84%). This pattern of differentiation can be explained by (1) ocean surface current patterns present during Z. noltii's reproductive season which cause a dispersal barrier between the northern and southern populations of this region, (2) habitat isolation, due to large geographic distances between suitable habitats, preventing frequent gene flow, and (3) small effective population sizes, causing high drift and thus faster differentiation rates.

Research paper thumbnail of Population structure and historical demography of the thorny skate (Amblyraja radiata, Rajidae) in the North Atlantic

Marine Biology, 2006

Population genetic structure of the thorny skate (Amblyraja radiata) was surveyed in >300 individ... more Population genetic structure of the thorny skate (Amblyraja radiata) was surveyed in >300 individuals sampled from Newfoundland, Iceland, Norway, the Kattegat and the central North Sea. A 290-bp fragment of the mt cytochrome-b gene was first screened by SSCP. Sequences of SSCP haplotypes revealed 34 haplotypes, 14 of which were unique to Iceland, 3 to Newfoundland, 1 to Norway and 3 to the Kattegat. The global F ST was weak but significant. Removal of the two Kattegat locations, which were the most differentiated, resulted in no significant genetic differentiation. Haplotype diversity was high and evenly distributed across the entire Atlantic (h = 0.8) with the exception of the North Sea (h = 0.48). Statistical parsimony revealed a star-like genealogy with a central widespread haplotype. A subsequent nested clade analysis led to the inference of contiguous expansion with evidence for long distance dispersal between Newfoundland and Iceland. Historical demographic analysis showed that thorny skates have undergone exponential population expansion that started between 1.1 million and 690,000 years ago; and that the Last Glacial Maximum apparently had little effect. These results strongly differ from those of a parallel study of the thornback ray (Raja clavata) in which clear structure and former refugial areas could be identified. Although both species have similar life history traits and overlapping ranges, the continental shelf edge apparently does not present a barrier to migration in A. radiata, as it does for R. clavata.

Research paper thumbnail of Population structure of plaice (Pleuronectes platessa L.) in northern Europe: a comparison of resolving power between microsatellites and mitochondrial DNA data

Journal of Sea Research, 2004

We used Single Strand Conformation Polymorphism (SSCP) of mtDNA control region to assess the popu... more We used Single Strand Conformation Polymorphism (SSCP) of mtDNA control region to assess the population structure of the flatfish Pleuronectes platessa (plaice), to compare these data with a previous study based on microsatellite loci, and to test for possible sex-biased dispersal. From 461 individuals, 163 haplotypes were identified across 11 locations. Diversity was higher with mtDNA (h = 0.776 to 0.981; p = 0.0178 to 0.0298) as compared to microsatellite loci using the same samples (H e = 0.721 to 0.77). Genetic diversity was lower in samples from Iceland and Faroe, as compared to the continental shelf samples. Although both classes of markers revealed a relatively strong differentiation between shelf and off-shelf populations (h = 0.1015 and h = 0.0351, respectively), only the mtDNA data were able to detect differentiation within the continental shelf, i.e., a North Sea-Irish Sea group which was weakly distinguishable from Norway (h = 0.0046), the Baltic (h = 0.0136) and the Bay of Biscay (h = 0.0162). No evidence was obtained for isolation by distance, nor for sex-biased dispersal. This study demonstrates the importance of using more than one class of markers, especially for species such as plaice, with large populations, high dispersal and recent colonisation histories.

Research paper thumbnail of Paternal Leakage of Mitochondrial Dna in a Fucus (Phaeophyceae) Hybrid Zone

Journal of Phycology, 2009

Eukaryotic mitochondria are mostly uniparentally (maternally) inherited, although mtDNA heteropla... more Eukaryotic mitochondria are mostly uniparentally (maternally) inherited, although mtDNA heteroplasmy has been reported in all major lineages. Heteroplasmy, the presence of more than one mitochondrial genome in an individual, can arise from recombination, point mutations, or by occasional transmission of the paternal mtDNA (=paternal leakage). Here, we report the first evidence of mtDNA paternal leakage in brown algae. In Denmark, where Fucus serratus L. and Fucus evanescens C. Agardh have hybridized for years, we found eight introgressed individuals that possessed the very distinct haplotypes of each parental species. The finding of heteroplasmy in individuals resulting from several generations of backcrosses suggests that paternal leakage occurred in earlier generations and has persisted through several meiotic bottlenecks.

Research paper thumbnail of Decadal stability in genetic variation and structure in the intertidal seaweed Fucus serratus (Heterokontophyta: Fucaceae)

BMC Evolutionary Biology, 2018

Background: The spatial distribution of genetic diversity and structure has important implication... more Background: The spatial distribution of genetic diversity and structure has important implications for conservation as it reveals a species' strong and weak points with regard to stability and evolutionary capacity. Temporal genetic stability is rarely tested in marine species other than commercially important fishes, but is crucial for the utility of temporal snapshots in conservation management. High and stable diversity can help to mitigate the predicted northward range shift of seaweeds under the impact of climate change. Given the key ecological role of fucoid seaweeds along rocky shores, the positive effect of genetic diversity may reach beyond the species level to stabilize the entire intertidal ecosystem along the temperate North Atlantic. In this study, we estimated the effective population size, as well as temporal changes in genetic structure and diversity of the seaweed F. serratus using 22 microsatellite markers. Samples were taken across latitudes and a range of temperature regimes at seven locations with decadal sampling (2000 and 2010). Results: Across latitudes, genetic structure and diversity remained stable over 5-10 generations. Stable small-scale structure enhanced regional diversity throughout the species' range. In accordance with its biogeographic history, effective population size and diversity peaked in the species' mid-range in Brittany (France), and declined towards its leading and trailing edge to the north and south. At the species' southern edge, multi-locus-heterozygosity displayed a strong decline from 1999 to 2010. Conclusion: Temporally stable genetic structure over small spatial scales is a potential driver for local adaptation and species radiation in the genus Fucus. Survival and adaptation of the low-diversity leading edge of F. serratus may be enhanced by regional gene flow and 'surfing' of favorable mutations or impaired by the accumulation of deleterious mutations. Our results have clear implications for the conservation of F. serratus at its genetically unique southern edge in Northwest Iberia, where increasing temperatures are likely the major cause for the decline not only of F. serratus, but also other intertidal and subtidal macroalgae. We expect that F. serratus will disappear from Northwest Iberia by 2100 if genetic rescue is not induced by the influx of genetic variation from Brittany.

Research paper thumbnail of Eelgrass Meadows in the California Channel Islands and Adjacent Coast Reveal a Mosaic of Two Species, Evidence for Introgression and Variable Clonality

Annals of Botany, 2007

Background and Aims Seagrasses are important facilitator species in shallow, soft-bottom marine e... more Background and Aims Seagrasses are important facilitator species in shallow, soft-bottom marine environments worldwide and, in many places, are threatened by coastal development and eutrophication. One narrow-leaved species (Zostera marina) and one wide-leaved species, variously designated as Z. marina, Z. pacifica or Z. asiatica, are found off the California Channel Islands and adjacent California-Mexico coast. The aim of the present study was to confirm species identification genetically and to link patterns of genetic diversity, connectivity and hybridization among and within the populations with historical sea levels (Ice Age) or the contemporary environment. † Methods Samples (n ¼ 11-100) were collected from 28 sites off five California Channel Islands and six sites off the adjacent coast of southern California and Baja California, Mexico. DNA polymorphisms of the rDNA-ITS (internal transcribed spacer) cistron (nuclear), the matK intron (chloroplast) and nine microsatellite loci (nuclear) were examined in a population genetic and phylogeographic context. † Key Results All wide-leaved individuals were Z. pacifica, whereas narrow-leaved forms were Z. marina. Microsatellite genotypes were consistent with hybridization between the two species in three populations. The present distribution of Z. pacifica follows a glacial age land mass rather than present oceanographic regimes, but no link was observed between the present distribution of Z. marina and past or present environments. Island populations of Z. marina often were clonal and characterized by low genotypic diversity compared with populations along the Baja California coast. The high level of clonal connectivity around Santa Catalina Island indicated the importance of dispersal and subsequent re-establishment of vegetative fragments. † Conclusions The pristine environmental conditions of offshore islands do not guarantee maximum genetic diversity. Future restoration and transplantation efforts of seagrasses must recognize cryptic species and consider the degree of both genetic and genotypic variation in candidate donor populations.

Research paper thumbnail of Numerous mitigation transplants of the eelgrass Zostera marina in southern California shuffle genetic diversity and may promote hybridization with Zostera pacifica

Biological Conservation, 2014

Intensive human pressures along the southern California coast have led to >50 mitigation transpla... more Intensive human pressures along the southern California coast have led to >50 mitigation transplants of eelgrass over the past 30 years. We analyzed diversity and population structure of Zostera marina and Zostera pacifica at 36 locations to identify potential management units and further develop transplant guidelines. Normalized allelic diversity of Z. marina was uniformly moderate to high (4.78; 3.48-6.44) and nearly twofold higher than mainland Z. pacifica (2.70; 1.74-4.89). More than half of the Z. marina populations exhibited strongly significant inbreeding coefficients coupled with strong linkage disequilibrium attributable to transplant effects; neither attribute was found in Z. pacifica. Both species were characterized by high genotypic diversity and an absence of large clones. A Bayesian analysis of population structure suggested 6 potential management units for Z. marina and 3 for Z. pacifica; some units included disjunct locations associated with transplants. Hybridization between Z. marina and Z. pacifica was documented at Newport Bay Entrance Channel and south San Diego Bay. The presence of two species requires management plans for each, as well as avoidance of potential transplant-induced hybridization. Although transplant admixtures elevate diversity, shuffling among locations may potentially reduce the genetic potential necessary to ensure rapid adaptation, even though overall transplant success has been successful. Given that transplants will continue (from both plants and seeds), we recommend that the current requirement for ''two additional distinct donor sites'' be restricted to within a management unit for small, routine mitigations and expanded to among-management units for wholesale de novo restorations.

Research paper thumbnail of Climate change impact on seaweed meadow distribution in the North Atlantic rocky intertidal

Ecology and evolution, 2013

The North-Atlantic has warmed faster than all other ocean basins and climate change scenarios pre... more The North-Atlantic has warmed faster than all other ocean basins and climate change scenarios predict sea surface temperature isotherms to shift up to 600 km northwards by the end of the 21st century. The pole-ward shift has already begun for many temperate seaweed species that are important intertidal foundation species. We asked the question: Where will climate change have the greatest impact on three foundational, macroalgal species that occur along North-Atlantic shores: Fucus serratus, Fucus vesiculosus, and Ascophyllum nodosum? To predict distributional changes of these key species under three IPCC (Intergovernmental Panel on Climate Change) climate change scenarios (A2, A1B, and B1) over the coming two centuries, we generated Ecological Niche Models with the program MAXENT. Model predictions suggest that these three species will shift northwards as an assemblage or "unit" and that phytogeographic changes will be most pronounced in the southern Arctic and the souther...

Research paper thumbnail of A dated molecular phylogeny of manta and devil rays (Mobulidae) based on mitogenome and nuclear sequences

Molecular Phylogenetics and Evolution, 2015

Manta and devil rays are an iconic group of globally distributed pelagic filter feeders, yet thei... more Manta and devil rays are an iconic group of globally distributed pelagic filter feeders, yet their evolutionary history remains enigmatic. We employed next generation sequencing of mitogenomes for nine of the 11 recognized species and two outgroups; as well as additional Sanger sequencing of two mitochondrial and two nuclear genes in an extended taxon sampling set. Analysis of the mitogenome coding regions in a Maximum Likelihood and Bayesian framework provided a well-resolved phylogeny. The deepest divergences distinguished three clades with high support, one containing Manta birostris, Manta alfredi, Mobula tarapacana, Mobula japanica and Mobula mobular; one containing Mobula kuhlii, Mobula eregoodootenkee and Mobula thurstoni; and one containing Mobula munkiana, Mobula hypostoma and Mobula rochebrunei. Mobula remains paraphyletic with the inclusion of Manta, a result that is in agreement with previous studies based on molecular and morphological data. A fossil-calibrated Bayesian random local clock analysis suggests that mobulids diverged from Rhinoptera around 30 Mya. Subsequent divergences are characterized by long internodes followed by short bursts of speciation extending from an initial episode of divergence in the Early and Middle Miocene (19-17 Mya) to a second episode during the Pliocene and Pleistocene (3.6 Mya-recent). Estimates of divergence dates overlap significantly with periods of global warming, during which upwelling intensity-and related high primary productivity in upwelling regions-decreased markedly. These periods are hypothesized to have led to fragmentation and isolation of feeding regions leading to possible regional extinctions, as well as the promotion of allopatric speciation. The closely shared evolutionary history of mobulids in combination with ongoing threats from fisheries and climate change effects on upwelling and food supply, reinforces the case for greater protection of this charismatic family of pelagic filter feeders.

Research paper thumbnail of Stress Ecology in Fucus: Abiotic, Biotic and Genetic Interactions

Advances in Marine Biology, Vol 59, 2011

This chapter was originally published in the book Advances in Marine Biology. The copy attached i... more This chapter was originally published in the book Advances in Marine Biology. The copy attached is provided by Elsevier for the author's benefit and for the benefit of the author's institution, for noncommercial research, and educational use. This includes without limitation use in instruction at your institution, distribution to specific colleagues, and providing a copy to your institution's administrator. All other uses, reproduction and distribution, including without limitation commercial reprints, selling or licensing copies or access, or posting on open internet sites, your personal or institution's website or repository, are prohibited. For exceptions, permission may be sought for such use through Elsevier's

Research paper thumbnail of The most vagile host as the main determinant of population connectivity in marine macroparasites

Marine Ecology Progress Series, 2015

Research paper thumbnail of Historical invasions of the intertidal zone of Atlantic North America associated with distinctive patterns of trade and emigration

Proceedings of the National Academy of Sciences, 2009

Early invasions of the North American shore occurred mainly via deposition of ballast rock, which... more Early invasions of the North American shore occurred mainly via deposition of ballast rock, which effectively transported pieces of the intertidal zone across the Atlantic. From 1773–1861, >880 European ships entered Pictou Harbor, Nova Scotia, as a result of emigration and trade from Europe. The rockweed Fucus serratus (1868) and the snail Littorina littorea (≈1840) were found in Pictou during this same period. With shipping records (a proxy for propagule pressure) to guide sampling, we used F. serratus as a model to examine the introductions because of its relatively low genetic diversity and dispersal capability. Microsatellite markers and assignment tests revealed 2 introductions of the rockweed into Nova Scotia: 1 from Galway (Ireland) to Pictou and the other from Greenock (Scotland) to western Cape Breton Island. To examine whether a high-diversity, high-dispersing species might have similar pathways of introduction, we analyzed L. littorea , using cytochrome b haplotypes. ...

Research paper thumbnail of Evolution and diversification within the intertidal brown macroalgae Fucus spiralis/F. vesiculosus species complex in the North Atlantic

Molecular Phylogenetics and Evolution, 2011

We examined 733 individuals of Fucus spiralis from 21 locations and 1093 Fucus vesiculosus indivi... more We examined 733 individuals of Fucus spiralis from 21 locations and 1093 Fucus vesiculosus individuals from 37 locations throughout their northern hemisphere ranges using nuclear and mitochondrial markers. Three genetic entities of F. spiralis were recovered. In northern and sympatric populations, the presence of ''F. spiralis Low'' in the mid-intertidal and ''F. spiralis High'' in the high-intertidal was confirmed and both co-occurred with the sister species F. vesiculosus. The third and newly-discovered entity, ''F. spiralis South'', was present mainly in the southern range, where it did not co-occur with F. vesiculosus. The South entity diverged early in allopatry, then hybridized with F. vesiculosus in sympatry to produce F. spiralis Low. Ongoing parallel evolution of F. spiralis Low and F. spiralis High is most likely due to habitat preference/local selection and maintained by preferentially selfing reproductive strategies. Contemporary populations of F. spiralis throughout the North Atlantic stem from a glacial refugium around Brittany involving F. spiralis High; F. spiralis South was probably unaffected by glacial episodes. Exponential population expansion for F. vesiculosus began during the Cromer and/Holstein interglacial period (300,000-200,000 yrs BP). Following the last glacial maximum (30,000-22,000 yrs BP), a single mtDNA haplotype from a glacial refugium in SW Ireland colonized Scandinavia, the Central Atlantic islands, and the W Atlantic.

Research paper thumbnail of A mtDNA-based phylogeny of the brown algal genus Fucus (Heterokontophyta; Phaeophyta)

Molecular Phylogenetics and Evolution, 2006

Species of Fucus are among the dominant seaweeds along Northern Hemisphere shores, but taxonomic ... more Species of Fucus are among the dominant seaweeds along Northern Hemisphere shores, but taxonomic designations often are confounded by signiWcant intraspeciWc morphological variability. We analyzed intra-and inter-speciWc phylogenetic relationships within the genus (275 individuals representing 16 taxa) using two regions of the mitochondrion: a variable intergenic spacer and a conserved portion of the 23S subunit. Bayesian ML and MP analyses veriWed a shallow phylogeny with two major lineages (previously reported) and resolved some intra-lineage relationships. SigniWcant species-level paraphyly/polyphyly was observed within lineages 1A and 2. Despite higher species richness in the North Atlantic, a North PaciWc origin of the genus is supported by a gradient of decreasing haplotype and nucleotide diversities in F. distichus from the North PaciWc to the East Atlantic.

Research paper thumbnail of North Atlantic phylogeography and large-scale population differentiation of the seagrass Zostera marina L

Molecular Ecology, 2004

As the most widespread seagrass in temperate waters of the Northern Hemisphere, Zostera marina pr... more As the most widespread seagrass in temperate waters of the Northern Hemisphere, Zostera marina provides a unique opportunity to investigate the extent to which the historical legacy of the last glacial maximum (LGM18 000-10 000 years BP) is detectable in modern population genetic structure. We used sequences from the nuclear rDNA-internal transcribed spacer (ITS) and chloroplast mat K-intron, and nine microsatellite loci to survey 49 populations (> 2000 individuals) from throughout the species' range. Minimal sequence variation between Pacific and Atlantic populations combined with biogeographical groupings derived from the microsatellite data, suggest that the trans-Arctic connection is currently open. The east Pacific and west Atlantic are more connected than either is to the east Atlantic. Allelic richness was almost twofold higher in the Pacific. Populations from putative Atlantic refugia now represent the southern edges of the distribution and are not genetically diverse. Unexpectedly, the highest allelic diversity was observed in the North Sea-Wadden Sea-southwest Baltic region. Except for the Mediterranean and Black Seas, significant isolation-by-distance was found from ~150 to 5000 km. A transition from weak to strong isolation-by-distance occurred at ~150 km among northern European populations suggesting this scale as the natural limit for dispersal within the metapopulation. Links between historical and contemporary processes are discussed in terms of the projected effects of climate change on coastal marine plants. The identification of a high genetic diversity hotspot in Northern Europe provides a basis for restoration decisions.

Research paper thumbnail of Glacial refugia and recolonization pathways in the brown seaweedFucus serratus

Molecular Ecology, 2007

The last glacial maximum (20 000-18 000 years ago) dramatically affected extant distributions of ... more The last glacial maximum (20 000-18 000 years ago) dramatically affected extant distributions of virtually all northern European biota. Locations of refugia and postglacial recolonization pathways were examined in Fucus serratus (Heterokontophyta; Fucaceae) using a highly variable intergenic spacer developed from the complete mitochondrial genome of Fucus vesiculosus. Over 1500 samples from the entire range of F. serratus were analysed using fluorescent single strand conformation polymorphism. A total of 28 mtDNA haplotypes was identified and sequenced. Three refugia were recognized based on high haplotype diversities and the presence of endemic haplotypes: southwest Ireland, the northern Brittany-Hurd Deep area of the English Channel, and the northwest Iberian Peninsula. The Irish refugium was the source for a recolonization sweep involving a single haplotype via northern Scotland and throughout Scandinavia, whereas recolonization from the Brittany-Hurd Deep refugium was more limited, probably because of unsuitable soft-bottom habitat in the Bay of Biscay and along the Belgian and Dutch coasts. The Iberian populations reflect a remnant refugium at the present-day southern boundary of the species range. A generalized skyline plot suggested exponential population expansion beginning in the mid-Pleistocene with maximal growth during the Eems interglacial 128 000-67 000 years ago, implying that the last glacial maximum mainly shaped population distributions rather than demography.

Research paper thumbnail of Phylogeography and population structure of thornback rays (Raja clavata L., Rajidae)

Molecular Ecology, 2006

The phylogeography of thornback rays (Raja clavata) was assessed from European waters, using five... more The phylogeography of thornback rays (Raja clavata) was assessed from European waters, using five nuclear microsatellite loci and mitochondrial cytochome b sequences. Strong regional differentiation was found between the Mediterranean basin, the Azores and the European continental shelf. Allelic and haplotype diversities were high in Portuguese populations, consistent with the existence of a refugium along the Iberian Peninsula. Unexpectedly, high diversity was also found in the English Channel/North Sea area. The lowest genetic diversity was found in the Black Sea. Populations sampled from the Mediterranean, Adriatic and Black Seas were characterized by a single mitochondrial haplotype. This haplotype was also the most ancestral and widespread outside of the Mediterranean basin except for the Azores. Populations from the Azores were dominated by a second ancestral haplotype which was shared with British populations. Results from multidimensional scaling, amova and nested clade analysis indicate that British waters are a secondary contact zone recolonized from at least two refugia-one around the Iberian Peninsula and one possibly in the Azores. Links to a potential refugium known as the Hurd Deep, between Cornwall and Brittany, are discussed. Finally, a historical demographic analysis indicates that thornback ray populations started to expand between 580 000 and 362 000 years ago, which suggests that the Last Glacial Maximum (20 000 years ago) had mainly affected the distribution of populations rather than population size.

Research paper thumbnail of Thermal stress resistance of the brown alga Fucus serratus along the North-Atlantic coast: Acclimatization potential to climate change

Marine Genomics, 2014

Seaweed-dominated communities are predicted to disappear south of 45°latitude on North-Atlantic r... more Seaweed-dominated communities are predicted to disappear south of 45°latitude on North-Atlantic rocky shores by 2200 because of climate change. The extent of predicted habitat loss, however, could be mitigated if the seaweeds' physiology is sufficiently plastic to rapidly acclimatize to the warmer temperatures. The main objectives of this study were to identify whether the thermal tolerance of the canopy-forming seaweed Fucus serratus is population-specific and where temperatures are likely to exceed its tolerance limits in the next 200 years. We measured the stress response of seaweed samples from four populations (Norway, Denmark, Brittany and Spain) to common-garden heat stress (20°C-36°C) in both photosynthetic performance and transcriptomic upregulation of heat shock protein genes. The two stress indicators did not correlate and likely measured different cellular components of the stress response, but both indicators revealed populationspecific differences, suggesting ecotypic differentiation. Our results confirmed that thermal extremes will regularly reach physiologically stressful levels in Brittany (France) and further south by the end of the 22nd century. Although heat stress resilience in photosynthetic performance was higher at the species' southern distributional edge in Spain, the hsp expression pattern suggested that this edge-population experienced reduced fitness and limited responsiveness to further stressors. Thus, F. serratus may be unable to mitigate its predicted northward shift and may be at high risk to lose its center of genetic diversity and adaptability in Brittany (France). As it is an important intertidal key species, the disappearance of this seaweed will likely trigger major ecological changes in the entire associated ecosystem.

Research paper thumbnail of Population genetics of dwarf eelgrass Zostera noltii throughout its biogeographic range

Marine Ecology Progress Series, 2004

The marine angiosperm Zostera noltii (dwarf eelgrass), an important facilitator species and food ... more The marine angiosperm Zostera noltii (dwarf eelgrass), an important facilitator species and food source for invertebrates and waterfowl, predominantly inhabits intertidal habitats along eastern Atlantic shores from Mauritania to southern Norway/Kattegat Sea and throughout the Mediterranean, Black and Azov seas. We used 9 microsatellite loci to characterize population structure at a variety of spatial scales among 33 populations from 11 localities throughout the entire biogeographic range. Isolation by distance analysis suggested a panmictic genetic neighborhood of 100 to 150 km. At the global scale, a neighbor-joining tree based on Reynolds distances revealed strongly-supported groups corresponding to northern Europe, Mauritania and the Black/Azov Sea; separate Mediterranean and Atlantic-Iberian groups were poorly supported. Clones (genets with multiple ramets) were present in most populations but were generally small (ca. < 3 m 2). Exceptions were found in Mauritania (ca. 29 m in length), the Azov Sea (ca. 40 m in length) and the Black Sea (ca. 50 m in length). Although genetic diversity and allelic richness generally decreased from Mauritania to Denmark, the putative post-glacial recolonization route, both were unexpectedly high among populations from the German Wadden Sea.

Research paper thumbnail of Eelgrass Zostera marina populations in northern Norwegian fjords are genetically isolated and diverse

Marine Ecology Progress Series, 2013

Populations along the northern boundary of a marine species' distributional range in the NE Atlan... more Populations along the northern boundary of a marine species' distributional range in the NE Atlantic are expected to harbor lower standing genetic variation as a consequence of postglacial expansion following the last glacial maximum. Founder events and marginal habitat availability may render the edge populations more vulnerable to anthropogenic stress and less capable of rapid adaptation to global climate change, a concern for conservation and management. We analyzed meadow architecture, persistence and connectivity within and among 15 locations (600 samples genotyped with 8 microsatellite loci) in 3 fjords in Troms County, Norway (69°N). Whereas global mean allelic diversity (standardized for sample size) was in accordance with previous studies using the same markers, more extensive sampling revealed a broader range of allelic richness (mean = 2.85; range = 1.84 to 4.21) in the regional pool. Genotypic diversity was typically high, whereas large genets were rare (2 out of 15 locations). Population differentiation (F ST) was 2 to 6 times higher between fjords than within fjords. A Bayesian (STRUCTURE) analysis also strongly supported the genetic distinctness of each fjord. Although 9 locations within the 60 km long Balsfjord were connected by gene flow, demographic connectivity may actually be low, as fixed differences were observed at 6 of the 9 locations, along with significantly positive inbreeding coefficients and strong substructure. Overall, our results suggest that these northern, leading-edge meadows are healthy, but vigilance is required to avoid further losses. Fjord-level management, especially of the larger fjords, will be sufficient to capture the range of variation.

Research paper thumbnail of Population genetics of Zostera noltii along the west Iberian coast: consequences of small population size, habitat discontinuity and near-shore currents

Marine Ecology Progress Series, 2005

The effects of oceanographic patterns on marine genetic biodiversity along the SW Iberian Peninsu... more The effects of oceanographic patterns on marine genetic biodiversity along the SW Iberian Peninsula are poorly understood. We addressed the question of whether gene flow in this region depends solely on geographic distance between isolated patches of suitable habitat or if there are superimposed effects correlated with other factors such as current patterns. Zostera noltii, the dwarf eelgrass, is the keystone habitat-structuring seagrass species on intertidal mudflats along the Iberian west coast. We used 9 microsatellite loci to analyze population genetic diversity and differentiation for all existing 8 populations from NW Spain (Ria de Vigo) to SW Spain (Puerto Real, Cadiz). Populations are highly genetically differentiated as shown by high significant F ST ,Wright's fixation index, (0.08 to 0.26) values. A neighbor-joining tree based on Reynold's distances computed from allele frequencies revealed a split between northern and southern populations (bootstrap support of 84%). This pattern of differentiation can be explained by (1) ocean surface current patterns present during Z. noltii's reproductive season which cause a dispersal barrier between the northern and southern populations of this region, (2) habitat isolation, due to large geographic distances between suitable habitats, preventing frequent gene flow, and (3) small effective population sizes, causing high drift and thus faster differentiation rates.

Research paper thumbnail of Population structure and historical demography of the thorny skate (Amblyraja radiata, Rajidae) in the North Atlantic

Marine Biology, 2006

Population genetic structure of the thorny skate (Amblyraja radiata) was surveyed in >300 individ... more Population genetic structure of the thorny skate (Amblyraja radiata) was surveyed in >300 individuals sampled from Newfoundland, Iceland, Norway, the Kattegat and the central North Sea. A 290-bp fragment of the mt cytochrome-b gene was first screened by SSCP. Sequences of SSCP haplotypes revealed 34 haplotypes, 14 of which were unique to Iceland, 3 to Newfoundland, 1 to Norway and 3 to the Kattegat. The global F ST was weak but significant. Removal of the two Kattegat locations, which were the most differentiated, resulted in no significant genetic differentiation. Haplotype diversity was high and evenly distributed across the entire Atlantic (h = 0.8) with the exception of the North Sea (h = 0.48). Statistical parsimony revealed a star-like genealogy with a central widespread haplotype. A subsequent nested clade analysis led to the inference of contiguous expansion with evidence for long distance dispersal between Newfoundland and Iceland. Historical demographic analysis showed that thorny skates have undergone exponential population expansion that started between 1.1 million and 690,000 years ago; and that the Last Glacial Maximum apparently had little effect. These results strongly differ from those of a parallel study of the thornback ray (Raja clavata) in which clear structure and former refugial areas could be identified. Although both species have similar life history traits and overlapping ranges, the continental shelf edge apparently does not present a barrier to migration in A. radiata, as it does for R. clavata.

Research paper thumbnail of Population structure of plaice (Pleuronectes platessa L.) in northern Europe: a comparison of resolving power between microsatellites and mitochondrial DNA data

Journal of Sea Research, 2004

We used Single Strand Conformation Polymorphism (SSCP) of mtDNA control region to assess the popu... more We used Single Strand Conformation Polymorphism (SSCP) of mtDNA control region to assess the population structure of the flatfish Pleuronectes platessa (plaice), to compare these data with a previous study based on microsatellite loci, and to test for possible sex-biased dispersal. From 461 individuals, 163 haplotypes were identified across 11 locations. Diversity was higher with mtDNA (h = 0.776 to 0.981; p = 0.0178 to 0.0298) as compared to microsatellite loci using the same samples (H e = 0.721 to 0.77). Genetic diversity was lower in samples from Iceland and Faroe, as compared to the continental shelf samples. Although both classes of markers revealed a relatively strong differentiation between shelf and off-shelf populations (h = 0.1015 and h = 0.0351, respectively), only the mtDNA data were able to detect differentiation within the continental shelf, i.e., a North Sea-Irish Sea group which was weakly distinguishable from Norway (h = 0.0046), the Baltic (h = 0.0136) and the Bay of Biscay (h = 0.0162). No evidence was obtained for isolation by distance, nor for sex-biased dispersal. This study demonstrates the importance of using more than one class of markers, especially for species such as plaice, with large populations, high dispersal and recent colonisation histories.

Research paper thumbnail of Paternal Leakage of Mitochondrial Dna in a Fucus (Phaeophyceae) Hybrid Zone

Journal of Phycology, 2009

Eukaryotic mitochondria are mostly uniparentally (maternally) inherited, although mtDNA heteropla... more Eukaryotic mitochondria are mostly uniparentally (maternally) inherited, although mtDNA heteroplasmy has been reported in all major lineages. Heteroplasmy, the presence of more than one mitochondrial genome in an individual, can arise from recombination, point mutations, or by occasional transmission of the paternal mtDNA (=paternal leakage). Here, we report the first evidence of mtDNA paternal leakage in brown algae. In Denmark, where Fucus serratus L. and Fucus evanescens C. Agardh have hybridized for years, we found eight introgressed individuals that possessed the very distinct haplotypes of each parental species. The finding of heteroplasmy in individuals resulting from several generations of backcrosses suggests that paternal leakage occurred in earlier generations and has persisted through several meiotic bottlenecks.