Murat Oğuz - Academia.edu (original) (raw)

Papers by Murat Oğuz

Research paper thumbnail of Ecological Balance Element "Blowflies&quot

Istanbul University - DergiPark, Jun 25, 2022

Research paper thumbnail of Sık alt çizge madenciliği algoritmalarına uygulanabilir alan ve zaman verimliliği arttıran metotların geliştirilmesi

Maltepe Üniversitesi, Fen Bilimleri Enstitüsü, 2016

Research paper thumbnail of Investigation of Buckling Behavior of Beams with Artificial Neural Network

International scientific and vocational studies journal, Jun 30, 2021

In this study, the buckling behavior of a beam simply supported at both ends was analyzed analyti... more In this study, the buckling behavior of a beam simply supported at both ends was analyzed analytically and numerically. The critical load of beams with different cross-sections was found by numerical analysis and these results were confirmed by analytical analyses. Then, the Artificial Neural Network (ANN) model was created using the data of different beam sections. An ANN model is presented in order to find the critical load quickly and effectively for beams with different geometries with the obtained data sets. The training and testing data of this model are detailed for I and tubular beams.

Research paper thumbnail of Sık Alt Çizge Madenciliği Algoritmalarının Bellek Gereksinimlerini En Aza İndirmek İçin Yeni Bir Yaklaşım

Politeknik dergisi, Dec 31, 2020

Bu makaleye şu şekilde atıfta bulunabilirsiniz(To cite to this article): Bilgin T. T. ve Oğuz M.,... more Bu makaleye şu şekilde atıfta bulunabilirsiniz(To cite to this article): Bilgin T. T. ve Oğuz M., "A new approach to minimize memory requirements of frequent subgraph mining algorithms",

Research paper thumbnail of Akademik ve İdari Personele

Amaç ve hedeflerimize uygun olarak planlanan faaliyetlerin sürekliliğini sağlamak düşüncesiyle, Y... more Amaç ve hedeflerimize uygun olarak planlanan faaliyetlerin sürekliliğini sağlamak düşüncesiyle, Yüksek Okulumuzdan geçici veya sürekli olarak görevini bırakmak durumunda kalan, yıllık veya doğum iznine ayrılan, hastalanan veya idari izin verilen personel dönünceye kadar ya da yerine bir eleman atanıncaya kadar, yapması gereken işler karşılarında belirtilen kişiler tarafından yürütecektir. 30/11/2016 Gereğini rica ederim. Doç. Dr. Hamdullah ÇUVALCI Müdür VEKİL PERSONEL LİSTESİ Bu belge 5070 sayılı elektronik imza kanununa göre güvenli elektronik imza ile imzalanmıştır. Evrak teyidine http://e-belge.ktu.edu.tr adresinden Belge Num.:98506085-929-E.538 ve Barkod Num.:1107372 bilgileriyle erişebilirsiniz.

Research paper thumbnail of Photodynamic therapy for posterior capsule neovascularization

Journal of Cataract & Refractive Surgery, 2007

We report a 71-year-old man with posterior capsule opacification with severe neovascularization w... more We report a 71-year-old man with posterior capsule opacification with severe neovascularization who was treated with photodynamic therapy and neodymium:YAG capsulotomy. Treatment was performed using a diode laser at 692 nm, a light dose of 50 J/cm(2), and 6 mg/m(2) body surface area verteporfin. The initial visual acuity was hand motions; 6 months after therapy, the visual acuity was stable at 20/200. In 9 months of follow-up, there was no recurrence of neovascularization and the pupil area remained clear; no retreatment was needed. Photodynamic therapy provided safe and effective occlusion of neovascular vessels in the posterior capsule area.

Research paper thumbnail of A 3-day-old boy with a right preauricular swelling

European Journal of Pediatrics, 2010

A 3-day-old boy was admitted for right preauricular swelling. Examination showed a toxic looking ... more A 3-day-old boy was admitted for right preauricular swelling. Examination showed a toxic looking neonate with poor neonatal reflexes. There was erythema and swelling of 4 x 3 cm at the level of the right cheek. Laboratory investigation pointed to a bacterial infection. With parenteral antibiotics, the lesion resolved completely.

Research paper thumbnail of A Behavior Based Intrusion Detection System Using Machine Learning Algorithms

Humans are consistently referred to as the weakest link in information security. Human factors su... more Humans are consistently referred to as the weakest link in information security. Human factors such as individual differences, cognitive abilities and personality traits can impact on behavior and play a significant role in information security. The purpose of this study is to identify, describe and classify the human factors affecting Information Security and develop a model to reduce the risk of insider misuse and assess the use and performance of the best-suited artificial intelligence techniques in detection of misuse. More specifically, this study provides a comprehensive view of the human related information security risks and threats, classification study of the human related threats in information security, a methodology developed to reduce the risk of human related threats by detecting insider misuse by a behavior-based intrusion detection system using machine learning algorithms, and the comparison of the numerical experiments for analysis of this approach. Specifically, b...

Research paper thumbnail of A 3-day-old boy with a right preauricular swelling

European journal of …, 2010

A 3-day-old boy was admitted for right preaur-icular swelling. Examination showed a toxic looking... more A 3-day-old boy was admitted for right preaur-icular swelling. Examination showed a toxic looking neonate with poor neonatal reflexes. There was erythema and swelling of 4×3 cm at the level of the right cheek. Laboratory investigation pointed to a bacterial infection. ...

Research paper thumbnail of Sık Alt Çizge Madenciliği Algoritmalarının Bellek Gereksinimlerini En Aza İndirmek İçin Yeni Bir Yaklaşım

Research paper thumbnail of Multicommodity flows and Benders decomposition for restricted continuous location problems

European Journal of Operational Research

Research paper thumbnail of Clay Cooker (Tandir) Burns

Plastic and Reconstructive Surgery, Mar 1, 2005

... Many burns are caused by hot liquid scalds. Fifty percent of these burns occur in children, a... more ... Many burns are caused by hot liquid scalds. Fifty percent of these burns occur in children, and the most common site of injury is the kitchen. The second most common site of scald injury in the home is the bathroom, primarily because of hot tap water. ... Ilteris Murat Emsen, MD. ...

Research paper thumbnail of A modelling framework for solving restricted planar location problems using phi-objects

Journal of the Operational Research Society, 2016

This paper presents a general modelling framework for restricted facility location problems with ... more This paper presents a general modelling framework for restricted facility location problems with arbitrarily shaped forbidden regions or barriers, where regions are modelled using phi-objects. Phi-objects are an efficient tool in mathematical modelling of 2D and 3D geometric optimization problems, and are widely used in cutting and packing problems and covering problems. The paper shows that the proposed modelling framework can be applied to both median and centre facility location problems, either with barriers or forbidden regions. The resulting models are either mixed-integer linear or non-linear programming formulations, depending on the shape of the restricted region and the considered distance measure. Using the new framework, all instances from the existing literature for this class of problems are solved to optimality. The paper also introduces and optimally solves a realistic multifacility problem instance derived from an archipelago vulnerable to earthquakes. This problem instance is significantly more complex than any other instance described in the literature.

Research paper thumbnail of Effects of Rhizobium, arbuscular mycorrhiza and whey applications on some properties in chickpea (Cicer arietinum L.) under irrigated and rainfed conditions 1—Yield, yield components, nodulation and AMF colonization

The study aimed to determine the effect of whey application, the inoculation of Glomus intraradic... more The study aimed to determine the effect of whey application, the inoculation of Glomus intraradices Shench&Shimith and Mesorhizobium ciceri on root colonization, nodulation, yield and the components of yield in chickpea (Cicer arietinum L. cv. Aziziye-94) under rain-fed and irrigation management. Experiments were carried out in a split plot design with four replications in 2003 and 2004. The abovementioned factors were all applied to plants in single, double and triple combinations. The effect of irrigation was significant, with the heaviest yields being obtained under this treatment. Arbuscular mycorrhizal fungus (AMF) inoculation, alone or in combination with other treatments, was very effective under rain-fed conditions, resulting in large increases in yield, root colonization and phosphorus content of the seed and shoot. On the other hand, rhizobial inoculation increased significantly all traits examined, particularly root nodulation and the nitrogen content of seeds and shoots under irrigated conditions. Whey combined with AMF significantly increased root colonization while its combination with Rhizobium increased the number of nodules. Combinations of two or three treatments were more effective than individual applications. The greatest yield, root colonization and nodulation were obtained from the combination of all three treatments under irrigation.

Research paper thumbnail of Multiple erythematous nodules and ecthyma gangrenosum as a manifestation of Pseudomonas aeruginosa sepsis in a previously healthy infant

Pediatric dermatology

Pseudomonas aeruginosa septicemia is rare in healthy infants and children. Also not common, derma... more Pseudomonas aeruginosa septicemia is rare in healthy infants and children. Also not common, dermatologic manifestations such as ecthyma gangrenosum and indurated erythematous nodular lesions may be the first signs of pseudomonas infection, or may appear later in the course of the disease. Peripheral facial paralysis and mastoiditis are also rare and serious complications of acute otitis media caused by P. aeruginosa. We report a previously healthy 6-month-old boy who had an uncommon presentation and rare complications during the course of P. aeruginosa sepsis.

Research paper thumbnail of Behçet's Aortitis – a Case Report: False Aneurysm Rupture and Aortico-duodenal Fistula

Research paper thumbnail of Thermodynamic and structural analysis of interactions between peptide ligands and SEB

Staphylococcal enterotoxin B (SEB) is an exotoxin produced by Staphylococcus aureus and commonly ... more Staphylococcal enterotoxin B (SEB) is an exotoxin produced by Staphylococcus aureus and commonly associated with food poisoning. In this study, SEB-binding peptides were identified by screening a phage displayed peptide library. The binding of peptides to SEB was tested with isothermal titration calorimetry (ITC) and of the five selected peptides, three showed affinity to SEB, with one measured to have the highest affinity constant (10(5) M(-1)). ITC revealed that the interaction of peptide ligands with SEB was driven entropically and the binding was dominated by hydrophobic interactions. Circular dichroism (CD) measurements and molecular dynamics (MD) simulations, together, give a structural insight into the interaction of peptides with SEB. While SEB binding peptides showed random coil structure before binding, after complex formation they had more ordered structures. The peptide with highest affinity to SEB showed stable conformation during MD simulation. Taken together, our approach about thermodynamic and structural characterization of peptide ligands can be used to develop aptamers, with high affinity and selectivity, for biosensor applications.

Research paper thumbnail of A novel finding in thoracic outlet syndrome: tachycardia

Joint bone spine, 2004

In this case report, we rendered a 22 year old woman with the diagnosis of neurogenic thoracic ou... more In this case report, we rendered a 22 year old woman with the diagnosis of neurogenic thoracic outlet syndrome. We have evaluated her symptoms of palpitation with Holter monitorization during Roos test before and after surgery where transaxillary first rib ...

Research paper thumbnail of Ecological Balance Element "Blowflies&quot

Istanbul University - DergiPark, Jun 25, 2022

Research paper thumbnail of Sık alt çizge madenciliği algoritmalarına uygulanabilir alan ve zaman verimliliği arttıran metotların geliştirilmesi

Maltepe Üniversitesi, Fen Bilimleri Enstitüsü, 2016

Research paper thumbnail of Investigation of Buckling Behavior of Beams with Artificial Neural Network

International scientific and vocational studies journal, Jun 30, 2021

In this study, the buckling behavior of a beam simply supported at both ends was analyzed analyti... more In this study, the buckling behavior of a beam simply supported at both ends was analyzed analytically and numerically. The critical load of beams with different cross-sections was found by numerical analysis and these results were confirmed by analytical analyses. Then, the Artificial Neural Network (ANN) model was created using the data of different beam sections. An ANN model is presented in order to find the critical load quickly and effectively for beams with different geometries with the obtained data sets. The training and testing data of this model are detailed for I and tubular beams.

Research paper thumbnail of Sık Alt Çizge Madenciliği Algoritmalarının Bellek Gereksinimlerini En Aza İndirmek İçin Yeni Bir Yaklaşım

Politeknik dergisi, Dec 31, 2020

Bu makaleye şu şekilde atıfta bulunabilirsiniz(To cite to this article): Bilgin T. T. ve Oğuz M.,... more Bu makaleye şu şekilde atıfta bulunabilirsiniz(To cite to this article): Bilgin T. T. ve Oğuz M., "A new approach to minimize memory requirements of frequent subgraph mining algorithms",

Research paper thumbnail of Akademik ve İdari Personele

Amaç ve hedeflerimize uygun olarak planlanan faaliyetlerin sürekliliğini sağlamak düşüncesiyle, Y... more Amaç ve hedeflerimize uygun olarak planlanan faaliyetlerin sürekliliğini sağlamak düşüncesiyle, Yüksek Okulumuzdan geçici veya sürekli olarak görevini bırakmak durumunda kalan, yıllık veya doğum iznine ayrılan, hastalanan veya idari izin verilen personel dönünceye kadar ya da yerine bir eleman atanıncaya kadar, yapması gereken işler karşılarında belirtilen kişiler tarafından yürütecektir. 30/11/2016 Gereğini rica ederim. Doç. Dr. Hamdullah ÇUVALCI Müdür VEKİL PERSONEL LİSTESİ Bu belge 5070 sayılı elektronik imza kanununa göre güvenli elektronik imza ile imzalanmıştır. Evrak teyidine http://e-belge.ktu.edu.tr adresinden Belge Num.:98506085-929-E.538 ve Barkod Num.:1107372 bilgileriyle erişebilirsiniz.

Research paper thumbnail of Photodynamic therapy for posterior capsule neovascularization

Journal of Cataract & Refractive Surgery, 2007

We report a 71-year-old man with posterior capsule opacification with severe neovascularization w... more We report a 71-year-old man with posterior capsule opacification with severe neovascularization who was treated with photodynamic therapy and neodymium:YAG capsulotomy. Treatment was performed using a diode laser at 692 nm, a light dose of 50 J/cm(2), and 6 mg/m(2) body surface area verteporfin. The initial visual acuity was hand motions; 6 months after therapy, the visual acuity was stable at 20/200. In 9 months of follow-up, there was no recurrence of neovascularization and the pupil area remained clear; no retreatment was needed. Photodynamic therapy provided safe and effective occlusion of neovascular vessels in the posterior capsule area.

Research paper thumbnail of A 3-day-old boy with a right preauricular swelling

European Journal of Pediatrics, 2010

A 3-day-old boy was admitted for right preauricular swelling. Examination showed a toxic looking ... more A 3-day-old boy was admitted for right preauricular swelling. Examination showed a toxic looking neonate with poor neonatal reflexes. There was erythema and swelling of 4 x 3 cm at the level of the right cheek. Laboratory investigation pointed to a bacterial infection. With parenteral antibiotics, the lesion resolved completely.

Research paper thumbnail of A Behavior Based Intrusion Detection System Using Machine Learning Algorithms

Humans are consistently referred to as the weakest link in information security. Human factors su... more Humans are consistently referred to as the weakest link in information security. Human factors such as individual differences, cognitive abilities and personality traits can impact on behavior and play a significant role in information security. The purpose of this study is to identify, describe and classify the human factors affecting Information Security and develop a model to reduce the risk of insider misuse and assess the use and performance of the best-suited artificial intelligence techniques in detection of misuse. More specifically, this study provides a comprehensive view of the human related information security risks and threats, classification study of the human related threats in information security, a methodology developed to reduce the risk of human related threats by detecting insider misuse by a behavior-based intrusion detection system using machine learning algorithms, and the comparison of the numerical experiments for analysis of this approach. Specifically, b...

Research paper thumbnail of A 3-day-old boy with a right preauricular swelling

European journal of …, 2010

A 3-day-old boy was admitted for right preaur-icular swelling. Examination showed a toxic looking... more A 3-day-old boy was admitted for right preaur-icular swelling. Examination showed a toxic looking neonate with poor neonatal reflexes. There was erythema and swelling of 4×3 cm at the level of the right cheek. Laboratory investigation pointed to a bacterial infection. ...

Research paper thumbnail of Sık Alt Çizge Madenciliği Algoritmalarının Bellek Gereksinimlerini En Aza İndirmek İçin Yeni Bir Yaklaşım

Research paper thumbnail of Multicommodity flows and Benders decomposition for restricted continuous location problems

European Journal of Operational Research

Research paper thumbnail of Clay Cooker (Tandir) Burns

Plastic and Reconstructive Surgery, Mar 1, 2005

... Many burns are caused by hot liquid scalds. Fifty percent of these burns occur in children, a... more ... Many burns are caused by hot liquid scalds. Fifty percent of these burns occur in children, and the most common site of injury is the kitchen. The second most common site of scald injury in the home is the bathroom, primarily because of hot tap water. ... Ilteris Murat Emsen, MD. ...

Research paper thumbnail of A modelling framework for solving restricted planar location problems using phi-objects

Journal of the Operational Research Society, 2016

This paper presents a general modelling framework for restricted facility location problems with ... more This paper presents a general modelling framework for restricted facility location problems with arbitrarily shaped forbidden regions or barriers, where regions are modelled using phi-objects. Phi-objects are an efficient tool in mathematical modelling of 2D and 3D geometric optimization problems, and are widely used in cutting and packing problems and covering problems. The paper shows that the proposed modelling framework can be applied to both median and centre facility location problems, either with barriers or forbidden regions. The resulting models are either mixed-integer linear or non-linear programming formulations, depending on the shape of the restricted region and the considered distance measure. Using the new framework, all instances from the existing literature for this class of problems are solved to optimality. The paper also introduces and optimally solves a realistic multifacility problem instance derived from an archipelago vulnerable to earthquakes. This problem instance is significantly more complex than any other instance described in the literature.

Research paper thumbnail of Effects of Rhizobium, arbuscular mycorrhiza and whey applications on some properties in chickpea (Cicer arietinum L.) under irrigated and rainfed conditions 1—Yield, yield components, nodulation and AMF colonization

The study aimed to determine the effect of whey application, the inoculation of Glomus intraradic... more The study aimed to determine the effect of whey application, the inoculation of Glomus intraradices Shench&Shimith and Mesorhizobium ciceri on root colonization, nodulation, yield and the components of yield in chickpea (Cicer arietinum L. cv. Aziziye-94) under rain-fed and irrigation management. Experiments were carried out in a split plot design with four replications in 2003 and 2004. The abovementioned factors were all applied to plants in single, double and triple combinations. The effect of irrigation was significant, with the heaviest yields being obtained under this treatment. Arbuscular mycorrhizal fungus (AMF) inoculation, alone or in combination with other treatments, was very effective under rain-fed conditions, resulting in large increases in yield, root colonization and phosphorus content of the seed and shoot. On the other hand, rhizobial inoculation increased significantly all traits examined, particularly root nodulation and the nitrogen content of seeds and shoots under irrigated conditions. Whey combined with AMF significantly increased root colonization while its combination with Rhizobium increased the number of nodules. Combinations of two or three treatments were more effective than individual applications. The greatest yield, root colonization and nodulation were obtained from the combination of all three treatments under irrigation.

Research paper thumbnail of Multiple erythematous nodules and ecthyma gangrenosum as a manifestation of Pseudomonas aeruginosa sepsis in a previously healthy infant

Pediatric dermatology

Pseudomonas aeruginosa septicemia is rare in healthy infants and children. Also not common, derma... more Pseudomonas aeruginosa septicemia is rare in healthy infants and children. Also not common, dermatologic manifestations such as ecthyma gangrenosum and indurated erythematous nodular lesions may be the first signs of pseudomonas infection, or may appear later in the course of the disease. Peripheral facial paralysis and mastoiditis are also rare and serious complications of acute otitis media caused by P. aeruginosa. We report a previously healthy 6-month-old boy who had an uncommon presentation and rare complications during the course of P. aeruginosa sepsis.

Research paper thumbnail of Behçet's Aortitis – a Case Report: False Aneurysm Rupture and Aortico-duodenal Fistula

Research paper thumbnail of Thermodynamic and structural analysis of interactions between peptide ligands and SEB

Staphylococcal enterotoxin B (SEB) is an exotoxin produced by Staphylococcus aureus and commonly ... more Staphylococcal enterotoxin B (SEB) is an exotoxin produced by Staphylococcus aureus and commonly associated with food poisoning. In this study, SEB-binding peptides were identified by screening a phage displayed peptide library. The binding of peptides to SEB was tested with isothermal titration calorimetry (ITC) and of the five selected peptides, three showed affinity to SEB, with one measured to have the highest affinity constant (10(5) M(-1)). ITC revealed that the interaction of peptide ligands with SEB was driven entropically and the binding was dominated by hydrophobic interactions. Circular dichroism (CD) measurements and molecular dynamics (MD) simulations, together, give a structural insight into the interaction of peptides with SEB. While SEB binding peptides showed random coil structure before binding, after complex formation they had more ordered structures. The peptide with highest affinity to SEB showed stable conformation during MD simulation. Taken together, our approach about thermodynamic and structural characterization of peptide ligands can be used to develop aptamers, with high affinity and selectivity, for biosensor applications.

Research paper thumbnail of A novel finding in thoracic outlet syndrome: tachycardia

Joint bone spine, 2004

In this case report, we rendered a 22 year old woman with the diagnosis of neurogenic thoracic ou... more In this case report, we rendered a 22 year old woman with the diagnosis of neurogenic thoracic outlet syndrome. We have evaluated her symptoms of palpitation with Holter monitorization during Roos test before and after surgery where transaxillary first rib ...