Raymond Flynn - Academia.edu (original) (raw)

Papers by Raymond Flynn

Research paper thumbnail of Quantifying contributions of domestic wastewater treatment systems to nutrient fluxes in stream headwaters

Effective implementation of the Water Framework Directive requires a reappraisal of conventional ... more Effective implementation of the Water Framework Directive requires a reappraisal of conventional approaches to water quality monitoring. Quantifying the impact of domestic wastewater treatment systems (DWWTS) in Irish catchments is further complicated by high levels of natural heterogeneity. This paper presents a numerical model that couples attenuation to flow along different hydrological pathways contributing to river discharge; this permits estimation of the impact of DWWTS to overall nutrient fluxes under a range of geological conditions. Preliminary results suggest high levels of attenuation experienced before DWWTS effluent reaches bedrock play a significant role in reducing its ecological impact on aquatic receptors. Conversely, low levels of attenuation in systems discharging directly to surface water may affect water quality more significantly, particularly during prolonged dry periods in areas underlain by low productivity aquifers (>60% of Ireland), where dilution capacity is limited.

Research paper thumbnail of Understanding pathways transferring nutrients to streams: review of a major Irish study and its implications for determining water quality management strategies

Biology and environment, 2016

Research paper thumbnail of Comparison of saturated hydraulic conductivity estimated by empirical, hydraulic and numerical modeling methods at different scales in a coastal sand aquifer in Northern Ireland

Environmental Earth Sciences, Jun 13, 2023

Research paper thumbnail of Towards Conceptual Models of Flow and Transport in Irish Hard Rock Aquifers: A Multidisciplinary Approach

European geosciences union general assembly, Apr 1, 2011

Research paper thumbnail of Characterizing groundwater salinity patterns in a coastal sand aquifer at Magilligan, Northern Ireland, using geophysical and geotechnical methods

Environmental Earth Sciences, Apr 1, 2022

Research paper thumbnail of Application of GIS-based hydrological modelling to assess ecohydrology of blanket bogs

Research Square (Research Square), Dec 12, 2022

Research paper thumbnail of Multidisciplinary investigations of poorly productive hard rock aquifers in Ireland: typologies, properties and significance in the Irish water cycle

Across the Island of Ireland, hard rock aquifers which are found to underlie over 65% of Ireland ... more Across the Island of Ireland, hard rock aquifers which are found to underlie over 65% of Ireland (Robins and Misstear, 2000) are commonly referred to as poorly productive bedrock aquifers (PPA), characterised by low well yields (GSI, 2006). Despite their limited role in water supply, PPAs are found to contribute significantly to the maintenance of river baseflow levels, especially in upland catchments during sustained dry periods (Comte et al., 2012). Typically, these units are considered to be devoid of intrinsic matrix porosity: instead, the flow of groundwater is confined to secondary porosity generated through interconnected fractures and fissures. Previous studies have highlighted the challenges in characterising PPA systems due to the heterogeneity of geological structures at micrometre–metre (cf. Neuman, 2005) and regional scales (km to 10s km, cf. Krasny, 2002). This is particularly the case in hard rock environments where the permeability of bedrock is largely dictated by t...

Research paper thumbnail of Geophysical assessment of contamination from a wastewater treatment system in the Milltown lake catchment, Ireland

Residential on-site wastewater treatment systems (OSWTS), where contaminated wastewater discharge... more Residential on-site wastewater treatment systems (OSWTS), where contaminated wastewater discharges to the subsurface, act as the dominant means of domestic wastewater disposal in rural Ireland; septic tanks constitute the most common technology employed. The objective of this study was to determine the effectiveness of a number of non-invasive geophysical techniques, employed in conjunction with hydrogeological data, for characterising the three dimensional extent of a contaminant plume generated by septic tank effluent discharging to glacial-till subsoils at a test site within the Milltown Lake Catchment, Co. Monaghan, Republic of Ireland. It was found that the integrated use of three geophysical techniques, electromagnetics, electrical resistivity tomography and seismic refraction with existing hydrogeological and water quality data, significantly improved our understanding of the contaminant plume and associated subsurface contaminant pathways. The geophysical results, when combi...

Research paper thumbnail of The Influence Of Hydrogeological Setting On Nitrate Fate And Transport In Irish And British Aquifers And The Implications For Catchment Management

Orr, A., Yang, L., Cachandt, G., Nitsche, J., Archbold, M., Deakin, J., Ofterdinger, U., & Flynn,... more Orr, A., Yang, L., Cachandt, G., Nitsche, J., Archbold, M., Deakin, J., Ofterdinger, U., & Flynn, R. (2017). The Influence Of Hydrogeological Setting On Nitrate Fate And Transport In Irish And British Aquifers And The Implications For Catchment Management. In International Association of Hydrogeologists Irish Group Annual Conference 2017: Proceedings (pp. 111-117). (Proceedings of the 37th Annual Groundwater Conference (International Association of Hydrogeologists, Irish Group)). International Association of Hydrogeologists (Irish Group).

Research paper thumbnail of The geochemistry of Irish rivers

Journal of Hydrology: Regional Studies, 2021

Research paper thumbnail of The impact of aquifer stratification on saltwater intrusion characteristics. Comprehensive laboratory and numerical study

Hydrological Processes, 2021

Research paper thumbnail of Tidal monitoring on sandy beaches using perpendicular time-lapse photography

Research paper thumbnail of Impacts of Groundwater Drainage on Peatland Subsidence and Its Ecological Implications on an Atlantic Raised Bog

Water Resources Research, 2019

Field data of topography, water levels, and peat hydraulic conductivity collected over a 28‐year ... more Field data of topography, water levels, and peat hydraulic conductivity collected over a 28‐year period have revealed the impacts of marginal drainage on uncut raised bog ecohydrology and its peat properties. Drainage of the regional groundwater body has induced changes in the hydraulic properties of deep peat, with peat compression decreasing hydraulic conductivity and storativity while simultaneously introducing localized secondary porosity and effective storage. Where peat has increased in hydraulic conductivity, there is a corresponding decline in vertical hydraulic gradients and significant localized increases in recharge to the underlying substrate. Repeated topographic surveys show intense localized areas of peat consolidation (>5%) where it is underlain by highly permeable (>10 m/day) glacial till deposits. More widely, continued subsidence (4–6 mm/year) of the bog surface has been measured over 900 m from the bog margin, resulting in the progressive loss of approximat...

Research paper thumbnail of Use of geographical information system-based hydrological modelling for development of a raised bog conservation and restoration programme

Ecological Engineering, 2017

Research paper thumbnail of The influence of bedrock hydrogeology on catchment-scale nitrate fate and transport in fractured aquifers

Science of The Total Environment, 2016

Research paper thumbnail of Utilização de substitutos particulados para a avaliação da mobilidade microbiana em ecossistemas sub-superficiais

Research paper thumbnail of Quantifying the influence of humic acid adsorption on colloidal microsphere deposition onto iron-oxide-coated sand

Environmental Pollution, 2010

Research paper thumbnail of An overview of dissolved organic carbon in groundwater and implications for drinking water safety

Hydrogeology Journal, 2017

Research paper thumbnail of Laboratory and Numerical Study of Saltwater Upconing in Fractured Coastal Aquifers

Water, 2021

This study investigated the saltwater upconing mechanism in fractured coastal aquifers. Head-indu... more This study investigated the saltwater upconing mechanism in fractured coastal aquifers. Head-induced saline intrusion was initiated into three narrow sandbox aquifers containing individual horizontal discontinuities placed on different positions. Subsequently, using a peristaltic pump, freshwater was abstracted from the aquifers’ center, triggering saltwater upconing. Progressively larger pumping rates were applied until critical conditions, resulting in the wells’ salinization, were achieved. Advanced image analysis algorithms were utilized to recreate the saltwater concentration fields and quantify the extent of the saline wedges with a high accuracy. A numerical model was successfully employed to simulate the laboratory results and conduct a comprehensive sensitivity analysis, further expanding the findings of this investigation. The impact of the fractures’ length, permeability and position on the upconing mechanism was identified. It was established that the presence of high pe...

Research paper thumbnail of The effect of colour depth and image resolution on laboratory scale study of aquifer saltwater intrusion

Increased water consumption combined with the effects of sea level rise and change in rainfall pa... more Increased water consumption combined with the effects of sea level rise and change in rainfall patterns have intensified seawater intrusion in coastal aquifers. Sandbox setups have been utilized over the years to recreate saline intrusion on a laboratory scale and study the mechanisms of this phenomenon. Recreating saltwater concentration fields from light intensity values is a widely applied image analysis practice in such investigations. The current paper investigates the effect of image colour depth and resolution on this procedure. Glass beads of three different diameters were utilized to recreate three homogeneous and one heterogeneous aquifer in a sandbox setup. High resolution images of saltwater intrusion were acquired using a digital camera. From these images, new ones with modified colour depth (16-bit and 8-bit) and smaller resolution were reconstructed. Deriving regression coefficients for the 16-bit experimental images was 36% ~ 51% faster than doing so for their equiva...

Research paper thumbnail of Quantifying contributions of domestic wastewater treatment systems to nutrient fluxes in stream headwaters

Effective implementation of the Water Framework Directive requires a reappraisal of conventional ... more Effective implementation of the Water Framework Directive requires a reappraisal of conventional approaches to water quality monitoring. Quantifying the impact of domestic wastewater treatment systems (DWWTS) in Irish catchments is further complicated by high levels of natural heterogeneity. This paper presents a numerical model that couples attenuation to flow along different hydrological pathways contributing to river discharge; this permits estimation of the impact of DWWTS to overall nutrient fluxes under a range of geological conditions. Preliminary results suggest high levels of attenuation experienced before DWWTS effluent reaches bedrock play a significant role in reducing its ecological impact on aquatic receptors. Conversely, low levels of attenuation in systems discharging directly to surface water may affect water quality more significantly, particularly during prolonged dry periods in areas underlain by low productivity aquifers (>60% of Ireland), where dilution capacity is limited.

Research paper thumbnail of Understanding pathways transferring nutrients to streams: review of a major Irish study and its implications for determining water quality management strategies

Biology and environment, 2016

Research paper thumbnail of Comparison of saturated hydraulic conductivity estimated by empirical, hydraulic and numerical modeling methods at different scales in a coastal sand aquifer in Northern Ireland

Environmental Earth Sciences, Jun 13, 2023

Research paper thumbnail of Towards Conceptual Models of Flow and Transport in Irish Hard Rock Aquifers: A Multidisciplinary Approach

European geosciences union general assembly, Apr 1, 2011

Research paper thumbnail of Characterizing groundwater salinity patterns in a coastal sand aquifer at Magilligan, Northern Ireland, using geophysical and geotechnical methods

Environmental Earth Sciences, Apr 1, 2022

Research paper thumbnail of Application of GIS-based hydrological modelling to assess ecohydrology of blanket bogs

Research Square (Research Square), Dec 12, 2022

Research paper thumbnail of Multidisciplinary investigations of poorly productive hard rock aquifers in Ireland: typologies, properties and significance in the Irish water cycle

Across the Island of Ireland, hard rock aquifers which are found to underlie over 65% of Ireland ... more Across the Island of Ireland, hard rock aquifers which are found to underlie over 65% of Ireland (Robins and Misstear, 2000) are commonly referred to as poorly productive bedrock aquifers (PPA), characterised by low well yields (GSI, 2006). Despite their limited role in water supply, PPAs are found to contribute significantly to the maintenance of river baseflow levels, especially in upland catchments during sustained dry periods (Comte et al., 2012). Typically, these units are considered to be devoid of intrinsic matrix porosity: instead, the flow of groundwater is confined to secondary porosity generated through interconnected fractures and fissures. Previous studies have highlighted the challenges in characterising PPA systems due to the heterogeneity of geological structures at micrometre–metre (cf. Neuman, 2005) and regional scales (km to 10s km, cf. Krasny, 2002). This is particularly the case in hard rock environments where the permeability of bedrock is largely dictated by t...

Research paper thumbnail of Geophysical assessment of contamination from a wastewater treatment system in the Milltown lake catchment, Ireland

Residential on-site wastewater treatment systems (OSWTS), where contaminated wastewater discharge... more Residential on-site wastewater treatment systems (OSWTS), where contaminated wastewater discharges to the subsurface, act as the dominant means of domestic wastewater disposal in rural Ireland; septic tanks constitute the most common technology employed. The objective of this study was to determine the effectiveness of a number of non-invasive geophysical techniques, employed in conjunction with hydrogeological data, for characterising the three dimensional extent of a contaminant plume generated by septic tank effluent discharging to glacial-till subsoils at a test site within the Milltown Lake Catchment, Co. Monaghan, Republic of Ireland. It was found that the integrated use of three geophysical techniques, electromagnetics, electrical resistivity tomography and seismic refraction with existing hydrogeological and water quality data, significantly improved our understanding of the contaminant plume and associated subsurface contaminant pathways. The geophysical results, when combi...

Research paper thumbnail of The Influence Of Hydrogeological Setting On Nitrate Fate And Transport In Irish And British Aquifers And The Implications For Catchment Management

Orr, A., Yang, L., Cachandt, G., Nitsche, J., Archbold, M., Deakin, J., Ofterdinger, U., & Flynn,... more Orr, A., Yang, L., Cachandt, G., Nitsche, J., Archbold, M., Deakin, J., Ofterdinger, U., & Flynn, R. (2017). The Influence Of Hydrogeological Setting On Nitrate Fate And Transport In Irish And British Aquifers And The Implications For Catchment Management. In International Association of Hydrogeologists Irish Group Annual Conference 2017: Proceedings (pp. 111-117). (Proceedings of the 37th Annual Groundwater Conference (International Association of Hydrogeologists, Irish Group)). International Association of Hydrogeologists (Irish Group).

Research paper thumbnail of The geochemistry of Irish rivers

Journal of Hydrology: Regional Studies, 2021

Research paper thumbnail of The impact of aquifer stratification on saltwater intrusion characteristics. Comprehensive laboratory and numerical study

Hydrological Processes, 2021

Research paper thumbnail of Tidal monitoring on sandy beaches using perpendicular time-lapse photography

Research paper thumbnail of Impacts of Groundwater Drainage on Peatland Subsidence and Its Ecological Implications on an Atlantic Raised Bog

Water Resources Research, 2019

Field data of topography, water levels, and peat hydraulic conductivity collected over a 28‐year ... more Field data of topography, water levels, and peat hydraulic conductivity collected over a 28‐year period have revealed the impacts of marginal drainage on uncut raised bog ecohydrology and its peat properties. Drainage of the regional groundwater body has induced changes in the hydraulic properties of deep peat, with peat compression decreasing hydraulic conductivity and storativity while simultaneously introducing localized secondary porosity and effective storage. Where peat has increased in hydraulic conductivity, there is a corresponding decline in vertical hydraulic gradients and significant localized increases in recharge to the underlying substrate. Repeated topographic surveys show intense localized areas of peat consolidation (>5%) where it is underlain by highly permeable (>10 m/day) glacial till deposits. More widely, continued subsidence (4–6 mm/year) of the bog surface has been measured over 900 m from the bog margin, resulting in the progressive loss of approximat...

Research paper thumbnail of Use of geographical information system-based hydrological modelling for development of a raised bog conservation and restoration programme

Ecological Engineering, 2017

Research paper thumbnail of The influence of bedrock hydrogeology on catchment-scale nitrate fate and transport in fractured aquifers

Science of The Total Environment, 2016

Research paper thumbnail of Utilização de substitutos particulados para a avaliação da mobilidade microbiana em ecossistemas sub-superficiais

Research paper thumbnail of Quantifying the influence of humic acid adsorption on colloidal microsphere deposition onto iron-oxide-coated sand

Environmental Pollution, 2010

Research paper thumbnail of An overview of dissolved organic carbon in groundwater and implications for drinking water safety

Hydrogeology Journal, 2017

Research paper thumbnail of Laboratory and Numerical Study of Saltwater Upconing in Fractured Coastal Aquifers

Water, 2021

This study investigated the saltwater upconing mechanism in fractured coastal aquifers. Head-indu... more This study investigated the saltwater upconing mechanism in fractured coastal aquifers. Head-induced saline intrusion was initiated into three narrow sandbox aquifers containing individual horizontal discontinuities placed on different positions. Subsequently, using a peristaltic pump, freshwater was abstracted from the aquifers’ center, triggering saltwater upconing. Progressively larger pumping rates were applied until critical conditions, resulting in the wells’ salinization, were achieved. Advanced image analysis algorithms were utilized to recreate the saltwater concentration fields and quantify the extent of the saline wedges with a high accuracy. A numerical model was successfully employed to simulate the laboratory results and conduct a comprehensive sensitivity analysis, further expanding the findings of this investigation. The impact of the fractures’ length, permeability and position on the upconing mechanism was identified. It was established that the presence of high pe...

Research paper thumbnail of The effect of colour depth and image resolution on laboratory scale study of aquifer saltwater intrusion

Increased water consumption combined with the effects of sea level rise and change in rainfall pa... more Increased water consumption combined with the effects of sea level rise and change in rainfall patterns have intensified seawater intrusion in coastal aquifers. Sandbox setups have been utilized over the years to recreate saline intrusion on a laboratory scale and study the mechanisms of this phenomenon. Recreating saltwater concentration fields from light intensity values is a widely applied image analysis practice in such investigations. The current paper investigates the effect of image colour depth and resolution on this procedure. Glass beads of three different diameters were utilized to recreate three homogeneous and one heterogeneous aquifer in a sandbox setup. High resolution images of saltwater intrusion were acquired using a digital camera. From these images, new ones with modified colour depth (16-bit and 8-bit) and smaller resolution were reconstructed. Deriving regression coefficients for the 16-bit experimental images was 36% ~ 51% faster than doing so for their equiva...